SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04299  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014116
Annotation
beta-N-acetylglucosaminidase_2_precursor_[Bombyx_mori]
Full name
Beta-hexosaminidase      
Location in the cell
Cytoplasmic   Reliability : 1.353 Lysosomal   Reliability : 1.041
 

Sequence

CDS
ATGCAATCGATAGAAATTCCTTACTACAAATTTGATAGTGATGTACTTGAAATTAAGGTAATCGAACATGATTGTCCTATTCTGTCGAATGCCGTCCAACGGAGTCTGGCGGTATTGAGAGATATGCTCCGAATCGCGAGTCCGTATGTAAACCGCAATGCGCCACAACAGGTCTTAGATGATGATACATACGACGGACCACTGAAGAGTCTAAGCATTTACTTGACATCACCCTGTGAAGAATATCCGCATTTCGGCATGATCGAGAGCTACAATCTGACGATCGCCGCTGACAGCACACTCAGAAGTTCATCGATATGGGGAATACTGAGAGGCTTGGAAAGTTGGACGCACCTGTTTCATCTCTCAGATAATCGTGATCAATTGCACATTAACAAAGGTGAAGTTCACGACTTTCCCCGTTACCCTCACAGAGGACTGCTCGTTGACACATCACGTCATTACATCTCAATGTCTAATATCCTACTCATTTTGGACGCTATGGCCATGAACAAGATGAACGTATTTCACTGGCACATTGTTGACGACCAGAGTTTCCCATATCAGAGCGAAAGGTTTCCCGATTTGAGTCGTCTGGGAGCCTATCACGAGACCTTGATTTACACCAAGAAAGACATTCAGACGGTTATCGACTACGCAAGGAACAGGGGGATCAGAGTTATTCCTGAATTCGATGTACCCGGTCACACAAGGTCCTGGGGTGTAGCCAAACCCGAACTCCTGACACATTGCTACAACGAATACGCTGTCGACATGGGTCTCGGTCCGATGAACCCAATCAAGGACAGCACATACACCTTCCTGCGGGAACTGTTTCATGAGGTCCAGGCCTTGTTTCCGGATAGATACATTCACATCGGAGGTGATGAAGTCGATCTAGATTGCTGGGAGTCGAATCCAGAATTCCAGAGATACATACAAGAGCACAACCTGACTTCGGTAGCTGATTTTCACGCTCTATTCATGCGCAACACGATTCCTCTGCTCAGCGAAAACTCGAGACCGATTGTGTGGCAGGAAGTTTTCGATGAAGGCGTGCCCCTTCCGAAGGACACTATCGTGCAAGTGTGGAAGGGAAACGAAGTTTACGAAATGTTGAATATCCTAAGAGCAAGTCACCAGTTAATCTATTCCTCTGGCTGGTACCTTGACCATCTGAAAACTGGAGGCGATTGGACGGAATTTTTCAACAAGGACCCTCGGGATATGGTCAGCGGCCTCAGCAAAGACATCAATGTTGACAACATTGTAGGTGGCGAAGCTTGCATGTGGACAGAAGTTGTTAACGACATGAACATTATGAGCAGAGTATGGCCACGAGCTAGTGCTGTAGCTGAAAGACTGTGGGGCCACGAATCACAGGCAGCATATCAAGTATACTCTCGCTTAGAGGAGCACACATGCAGAATGAACGCGCGCGGCATACGCGCCCAGCCACCCAGTGGCCCTGGCTTCTGCCTAGGCGCTTAG
Protein
MQSIEIPYYKFDSDVLEIKVIEHDCPILSNAVQRSLAVLRDMLRIASPYVNRNAPQQVLDDDTYDGPLKSLSIYLTSPCEEYPHFGMIESYNLTIAADSTLRSSSIWGILRGLESWTHLFHLSDNRDQLHINKGEVHDFPRYPHRGLLVDTSRHYISMSNILLILDAMAMNKMNVFHWHIVDDQSFPYQSERFPDLSRLGAYHETLIYTKKDIQTVIDYARNRGIRVIPEFDVPGHTRSWGVAKPELLTHCYNEYAVDMGLGPMNPIKDSTYTFLRELFHEVQALFPDRYIHIGGDEVDLDCWESNPEFQRYIQEHNLTSVADFHALFMRNTIPLLSENSRPIVWQEVFDEGVPLPKDTIVQVWKGNEVYEMLNILRASHQLIYSSGWYLDHLKTGGDWTEFFNKDPRDMVSGLSKDINVDNIVGGEACMWTEVVNDMNIMSRVWPRASAVAERLWGHESQAAYQVYSRLEEHTCRMNARGIRAQPPSGPGFCLGA

Summary

Catalytic Activity
Hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides.
Similarity
Belongs to the glycosyl hydrolase 20 family.
Feature
chain  Beta-hexosaminidase
EC Number
3.2.1.52
EMBL
BABH01031930    BABH01031931    BABH01031932    AB286958    BAF52532.1    AY601817    + More
AAT99455.1    AY601818    AAT99456.1    BABH01031937    BABH01031938    EF469203    ABO65045.1    DQ249307    ABB76924.1    AGBW02010485    OWR48417.1    KQ460949    KPJ10417.1    KPJ10418.1    DQ183186    DQ249309    ABA27426.1    ABB76926.1    DQ249308    ABB76925.1    DQ183187    ABA27427.1    KQ459598    KPI94536.1    BABH01028856    BABH01028857    ODYU01011852    SOQ57833.1    EU180214    ABY57947.1    ODYU01001373    SOQ37455.1    KPI94537.1    NWSH01000359    PCG77015.1    GFDF01005290    JAV08794.1    GL442063    EFN63973.1    KY563514    ARK19923.1    LBMM01002481    KMQ94768.1    DS232645    EDS44384.1    CH477320    EAT43655.1    EJY57559.1    AAZX01003868    KQ435007    KZC13512.1    GL447845    EFN85825.1    AAZX01003866    EDS44385.1    DS235442    EEB15774.1    UFQT01001452    SSX30615.1    APCN01001633    NNAY01003607    OXU19117.1    AAAB01008980    EAA14547.4    AJVK01009523    AJVK01009524    KQ435792    KOX74285.1    KK107128    QOIP01000006    EZA58264.1    RLU21577.1    AXCN02001981    KQ978966    KYN26909.1    JTDY01010100    KOB61159.1    KQ981225    KYN44362.1    MK075207    AYV99610.1    NEVH01026403    PNF14160.1    ADMH02001300    ETN63089.1    JXUM01066149    KQ562383    KXJ76018.1    PNF14159.1    KQ971354    EFA05960.2    GANO01002584    JAB57287.1    PYGN01000972    PSN38811.1    CVRI01000008    CRK88449.1    GEDC01022680    JAS14618.1    GL769168    EFZ10621.1    KB631654    ERL85065.1    KM217121    AJO25046.1    PCG77016.1    ATLV01020229    ATLV01020230    KE525296    KFB44930.1    GL888730    EGI58234.1    GEZM01046313    JAV77340.1    KQ977412    KYN02892.1    EFA07069.1    AXCM01006623    KQ982665    KYQ52596.1    GBYB01012436    JAG82203.1    KQ765174    OAD54088.1    KK852722    KDR17734.1    GECZ01027707    JAS42062.1    ERL85064.1    EFA05959.1    APGK01052022    APGK01052023    KB741208    ENN72853.1    GCES01001496    JAR84827.1    GEBQ01026015    JAT13962.1    GEBQ01031184    JAT08793.1    KB202050    ESO92513.1    GECZ01031630    JAS38139.1    GANP01000808    JAB83660.1    KL670487    KFW79126.1    GANP01013912    JAB70556.1    LJIJ01000794    ODM94535.1    LSYS01000242    OPJ90466.1    GCES01026591    JAR59732.1   
Pfam
PF14845   Glycohydro_20b2        + More
PF00728   Glyco_hydro_20
PF03031   NIF
PF02931   Neur_chan_LBD
PF08543   Phos_pyr_kin
Interpro
IPR029019   HEX_eukaryotic_N        + More
IPR015883   Glyco_hydro_20_cat       
IPR029018   Hex-like_dom2       
IPR017853   Glycoside_hydrolase_SF       
IPR025705   Beta_hexosaminidase_sua/sub       
IPR036412   HAD-like_sf       
IPR004274   FCP1_dom       
IPR036734   Neur_chan_lig-bd_sf       
IPR006202   Neur_chan_lig-bd       
IPR004625   PyrdxlKinase       
IPR013749   PM/HMP-P_kinase-1       
IPR029056   Ribokinase-like       
SUPFAM
SSF55545   SSF55545        + More
SSF51445   SSF51445       
SSF56784   SSF56784       
SSF63712   SSF63712       
SSF53613   SSF53613       
Gene 3D
PDB
3LMY     E-value=1.04774e-105,     Score=981

Ontologies

Topology

Length:
496
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.05452
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00575
outside
1  -  496
 
 

Population Genetic Test Statistics

Pi
146.291593
Theta
143.02573
Tajima's D
-0.830656
CLR
1.312984
CSRT
0.168291585420729
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
28556443 DTIVQVWK 100.00 8e-17
25860555 IFISQIIK 95.45 8e-10
26280517 YANMNDISDSSQQR 95.45 8e-10
24402669 YIHGDEPGWVDYTIWPFIER 95.45 8e-10
29197581 IWGHESQAAYQVYSR 95.45 8e-10
26280517 MIYSSSFDAIK 100.00 2e-08
24402669 MNVFHWHATDSHSFPIEASR 100.00 2e-08
28556443 SRPIVWQEVFDEGVPLPK 100.00 8e-07
28556443 PIVWQEVFDEGVPLPK 100.00 8e-07
28556443 PIVWQEVFDEGVPLPK 100.00 8e-07
28556443 PIVWQEVFDEGVPLPK 100.00 8e-07
20822545 GLESWTHLFHLSDNR 100.00 8e-06
20822545 GLESWTHLFHLSDNR 100.00 8e-06
20822545 GLESWTHLFHLSDNR 100.00 1e-05
20822545 NAPQQVLDDDTYDGPLK 100.00 1e-05
28556443 LGAYHETLIYTK 100.00 1e-05
28556443 TENIWDR 100.00 1e-05
28556443 PIVWQEVFDEGVPLPK 100.00 1e-05
28556443 PIVWQEVFDEGVPLPK 100.00 1e-05
28556443 LGAYHETLIYTK 100.00 1e-05
28556443 PIVWQEVFDEGVPLPK 100.00 1e-05
28556443 GNEVYEMLNILR 100.00 1e-05
28556443 GEVHDFPR 100.00 1e-05
20822545 ELFHEVQALFPDR 100.00 7e-05
20822545 ELFHEVQALFPDR 100.00 7e-05
20822545 ELFHEVQALFPDR 100.00 7e-05
26280517 QQNIEPQDITTGTR 100.00 7e-05
24402669 TGGDWTEFFNK 100.00 7e-05
28467696 TGGCVNIISPPAGQPSK 100.00 7e-05
29197581 GEVHDFPR 100.00 7e-05
20822545 LWGHESQAAYQVYSR 100.00 1e-04
28556443 SSSIWGILR 100.00 2e-04
20822545 TGGDWTEFFNKDPR 100.00 2e-04
20822545 TGGDWTEFFNKDPR 100.00 2e-04
20822545 TGGDWTEFFNKDPR 100.00 2e-04
20822545 LWGHESQAAYQVYSR 100.00 3e-04
20822545 LWGHESQAAYQVYSR 100.00 3e-04
20822545 DQLHINKGEVHDFPR 100.00 3e-04
28556443 GLESWTHLFHLSDNR 100.00 3e-04
28556443 GEVHDFPR 100.00 3e-04
28556443 FPDLSR 100.00 3e-04
28556443 ELFHEVQALFPDR 100.00 3e-04
20822545 GEVHDFPRYPHR 100.00 0.006
20822545 GNEVYEMLNILR 100.00 0.007
20822545 GEVHDFPRYPHR 100.00 0.007
20822545 LGAYHETLIYTKK 100.00 0.007
28556443 ELFHEVQALFPDR 100.00 0.007
28556443 ELFHEVQALFPDR 100.00 0.007
28556443 DIQTVIDYAR 100.00 0.007
28556443 DIQTVIDYAR 100.00 0.007
20822545 GNEVYEMLNILR 100.00 0.011
20822545 GNEVYEMLNILR 100.00 0.011
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