Gene

KWMTBOMO04297  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014121

Annotation

PREDICTED:_mRNA-decapping_enzyme_1A_[Papilio_polytes]

Location

Bomo_Chr8(+):2036970-2038515      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.793

CDS

ATGGCTGACACCGGGTTACGTAGTATGAATTTCGCTGCATTAAAGCGGGCAGATCCATATGCTCGTGAAATTGTCGATAGTGCTACCCACGTTGCCCTTTACACATTTGAAGAGAACGAATGGGAGAAAACCAACATTGAGGGTGCTTTGTTTGTGTACAGTAGAAATGGTGAACCATACCACAGTTTAGTGATTATGAACAGGCTGAACACTAACAACCTAATAGAACCAGTGTCTAAAGGAATTGAACTACAGTTAAAGGAGCCGTTTTTACTATATCGTAACGCCAAGTGCCGCATTTACGGTATATGGTTTTATGATAAGGACGAGTGCGTGCGAGTGGCCACGAAGTTGAACACATTAGTGAAAGAGTCCATAAAACAGTCGCAAGGCGAAACCATGCCACAGAATTCAGTTTACAATTCGTCTACAACTTCAACTCAATCTATAGATATCTTCAGCATGTTGAGTAAAGCGCAAGACGATTTCAATTCTAATAAAGGTGTTGCTGGAAACAAATCCGAATCGACGCCGGCCAAAGCGCCTGACATGACGTCGCAAAGTGTAATGGATTTCTTTGCAAAGGCTGGGAGTGGAGCATCGGCTCAAATGCCTGCAGTGTCTTCATTGCCCTCACCAGGGATATTCGGTCCGCGTGCCACTGATTCCAGAGAAGTACCACAGCTTTTACAGAGGCTCATGAGTAACCCTGCACATTCAGTAGAACATATTGAGAAGCAACAGCGATCTGTTACTCCTCAAGAAGGGCAAAGCTCAAATGGTAATTCTACACTAGATTCTGGTATCAAACCAAATTGTATGTTCTCATTAAAGTCAACTCCTTTGGAGAAGCAAAATCAAAGGATACCAGGATTGAAAAAAGCTCTGGATAGTAGTGATGCTAATGGAATAGTCACCATGGAGAATGAACTCAATTTGATGCACTTATCTTCTCCCAAGACAACATCGCCATTAGCTGCATACTTGAATCAATCTCAAGACATAGGACACACGAAACCGGCGCTGATGCCCCCCACAATGTTCACTGCAAGTTCAGGTGGTGATGTCCAGCCATCACCGCAGCCACTCACCAGGAATCAACTCCTTCAGGCCTTTAATTACTTACTCAAACATGATGCAGATTTTGTGAATAAACTTCACGAAGCCTATGTCAAATCGTTTTCAGAAAAAGCATTTTCTGTGTCATAA

Protein

MADTGLRSMNFAALKRADPYAREIVDSATHVALYTFEENEWEKTNIEGALFVYSRNGEPYHSLVIMNRLNTNNLIEPVSKGIELQLKEPFLLYRNAKCRIYGIWFYDKDECVRVATKLNTLVKESIKQSQGETMPQNSVYNSSTTSTQSIDIFSMLSKAQDDFNSNKGVAGNKSESTPAKAPDMTSQSVMDFFAKAGSGASAQMPAVSSLPSPGIFGPRATDSREVPQLLQRLMSNPAHSVEHIEKQQRSVTPQEGQSSNGNSTLDSGIKPNCMFSLKSTPLEKQNQRIPGLKKALDSSDANGIVTMENELNLMHLSSPKTTSPLAAYLNQSQDIGHTKPALMPPTMFTASSGGDVQPSPQPLTRNQLLQAFNYLLKHDADFVNKLHEAYVKSFSEKAFSVS

Uniprot

H9JX56   A0A2A4IV98   A0A2W1BNM9   A0A2H1V1A5   A0A194Q1Z9   A0A194RKR5   + More
S4NSU2   A0A212F6T8   A0A0L7LDK1   A0A067R8W4   A0A195B614   A0A158NQA7   A0A151JNJ4   A0A2J7PTV7   A0A151X9Y4   A0A154PF41   A0A151K116   A0A0T6AVZ9   A0A0L7R6M3   F4WBE9   E2B027   A0A3L8DC29   A0A026WLH7   A0A195CV03   E2BEK1   A0A0N0U393   A0A088A9F6   A0A2A3ED57   A0A1B6I4A3   A0A1B6GVX2   A0A2P8XI78   A0A1B6MRT8   A0A1B0GLW1   A0A1W4XLQ9   A0A1B6CJ42   A0A1L8DFR7   A0A1Y1NJX3   A0A1L8DGY6   A0A1B0CJA2   D6X0J0   E0VZ25   U4UME1   N6TM53   J9K8Y4   A0A2S2Q3R3   A0A1S3CW67   B0WEB0   Q17M13   A0A1S4EY16   A0A1Q3F0L5   A0A0K8TLC4   A0NAU2   A0A1Q3F002   A0A3B0JIU8   A0A034V8R5   A0A0K8UPI3   A0A336LMB7   A0A0A1WHN9   A0A1I8PGD1   B4KMC8   A0A0L0C9F6   A0A2R7VR28   A0A0M3QVL6   B4LNY7   B4GCX9   B4J643   Q292R0   B4MRP3   B3NQ15   W8CBP9   B4I8V6   B4QB16   B4PA91   A0A182V4G3   B3MCL7   T1H0H7   Q9W1H5   Q52KA4   A0A182GF77   A0A1I8N5D9   A0A182JFE2   A0A023EU20   A0A182GHH4   A0A1W4UMK9   A0A1J1IHV5   A0A1A9WP54   A0A1A9Y6H9   A0A1B0BI89   A0A0P6DTF4   A0A0N8C3I2   A0A0N8EC61   A0A0N8CBQ2   A0A1A9UJ05   A0A182NF54  

Pubmed

19121390    28756777    26354079    23622113    22118469    26227816    + More
24845553    21347285    21719571    20798317    30249741    24508170    29403074    28004739    18362917    19820115    20566863    23537049    17510324    26369729    9087549    12364791    14747013    17210077    25348373    25830018    17994087    26108605    15632085    24495485    22936249    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    19966221    23142987    26109357    26109356    26483478    25315136    24945155   

EMBL

BABH01031927    NWSH01006116    PCG63651.1    KZ150021    PZC74887.1    ODYU01000179    + More
SOQ34536.1    KQ459580    KPI99358.1    KQ460211    KPJ16561.1    GAIX01013912    JAA78648.1    AGBW02009971    OWR49447.1    JTDY01001552    KOB73557.1    KK852619    KDR20096.1    KQ976595    KYM79619.1    ADTU01023008    KQ978820    KYN28127.1    NEVH01021221    PNF19761.1    KQ982365    KYQ57120.1    KQ434890    KZC10432.1    KQ981189    KYN45215.1    LJIG01022737    KRT78974.1    KQ414646    KOC66542.1    GL888062    EGI68505.1    GL444372    EFN60953.1    QOIP01000010    RLU17439.1    KK107167    EZA56506.1    KQ977279    KYN03994.1    GL447817    EFN85891.1    KQ435896    KOX69302.1    KZ288277    PBC29713.1    GECU01025935    JAS81771.1    GECZ01003276    JAS66493.1    PYGN01002041    PSN31715.1    GEBQ01020398    GEBQ01001368    JAT19579.1    JAT38609.1    AJVK01009138    AJVK01009139    AJVK01009140    GEDC01023868    GEDC01021424    GEDC01005759    GEDC01000834    JAS13430.1    JAS15874.1    JAS31539.1    JAS36464.1    GFDF01008798    JAV05286.1    GEZM01001061    JAV98191.1    GFDF01008480    JAV05604.1    AJWK01014365    KQ971371    EFA10020.1    DS235849    EEB18631.1    KB632276    ERL91175.1    APGK01058895    APGK01058896    KB741292    ENN70335.1    ABLF02030669    GGMS01003153    MBY72356.1    DS231907    EDS45470.1    CH477209    EAT47731.1    GFDL01013961    JAV21084.1    GDAI01002479    JAI15124.1    AAAB01006459    EAU77895.2    GFDL01014171    JAV20874.1    OUUW01000001    SPP73166.1    GAKP01020812    JAC38140.1    GDHF01023700    JAI28614.1    UFQT01000021    SSX17911.1    GBXI01015723    JAC98568.1    CH933808    EDW09816.1    JRES01001518    JRES01000737    KNC22293.1    KNC28867.1    KK854031    PTY09856.1    CP012524    ALC42619.1    CH940648    EDW61156.1    CH479181    EDW31517.1    CH916367    EDW01901.1    CM000071    EAL24801.2    CH963850    EDW74782.1    CH954179    EDV56888.1    GAMC01000299    JAC06257.1    CH480824    EDW57031.1    CM000362    CM002911    EDX08453.1    KMY96149.1    CM000158    EDW92417.1    CH902619    EDV36251.1    CAQQ02373170    AE013599    AAF47089.1    ACZ94554.1    BT021964    AAX94785.1    JXUM01059531    KQ562059    KXJ76786.1    AXCP01007770    GAPW01001192    JAC12406.1    JXUM01063734    KQ562265    KXJ76272.1    CVRI01000053    CRK99784.1    JXJN01014862    GDIQ01073162    JAN21575.1    GDIQ01137242    GDIQ01118403    JAL33323.1    GDIQ01041180    JAN53557.1    GDIQ01095443    JAL56283.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    + More
UP000027135    UP000078540    UP000005205    UP000078492    UP000235965    UP000075809    UP000076502    UP000078541    UP000053825    UP000007755    UP000000311    UP000279307    UP000053097    UP000078542    UP000008237    UP000053105    UP000005203    UP000242457    UP000245037    UP000092462    UP000192223    UP000092461    UP000007266    UP000009046    UP000030742    UP000019118    UP000007819    UP000079169    UP000002320    UP000008820    UP000007062    UP000268350    UP000095300    UP000009192    UP000037069    UP000092553    UP000008792    UP000008744    UP000001070    UP000001819    UP000007798    UP000008711    UP000001292    UP000000304    UP000002282    UP000075903    UP000007801    UP000015102    UP000000803    UP000069940    UP000249989    UP000095301    UP000075880    UP000192221    UP000183832    UP000091820    UP000092443    UP000092460    UP000078200    UP000075884   

PRIDE

H9JX56    Q9W1H5    Q52KA4   

Pfam

PF06058   DCP1        + More
PF16741   mRNA_decap_C

Interpro

IPR011993   PH-like_dom_sf        + More
IPR010334   Dcp1       
IPR031953   mRNA_decap_C       

Gene 3D

2.30.29.30    

ProteinModelPortal

H9JX56   A0A2A4IV98   A0A2W1BNM9   A0A2H1V1A5   A0A194Q1Z9   A0A194RKR5   + More
S4NSU2   A0A212F6T8   A0A0L7LDK1   A0A067R8W4   A0A195B614   A0A158NQA7   A0A151JNJ4   A0A2J7PTV7   A0A151X9Y4   A0A154PF41   A0A151K116   A0A0T6AVZ9   A0A0L7R6M3   F4WBE9   E2B027   A0A3L8DC29   A0A026WLH7   A0A195CV03   E2BEK1   A0A0N0U393   A0A088A9F6   A0A2A3ED57   A0A1B6I4A3   A0A1B6GVX2   A0A2P8XI78   A0A1B6MRT8   A0A1B0GLW1   A0A1W4XLQ9   A0A1B6CJ42   A0A1L8DFR7   A0A1Y1NJX3   A0A1L8DGY6   A0A1B0CJA2   D6X0J0   E0VZ25   U4UME1   N6TM53   J9K8Y4   A0A2S2Q3R3   A0A1S3CW67   B0WEB0   Q17M13   A0A1S4EY16   A0A1Q3F0L5   A0A0K8TLC4   A0NAU2   A0A1Q3F002   A0A3B0JIU8   A0A034V8R5   A0A0K8UPI3   A0A336LMB7   A0A0A1WHN9   A0A1I8PGD1   B4KMC8   A0A0L0C9F6   A0A2R7VR28   A0A0M3QVL6   B4LNY7   B4GCX9   B4J643   Q292R0   B4MRP3   B3NQ15   W8CBP9   B4I8V6   B4QB16   B4PA91   A0A182V4G3   B3MCL7   T1H0H7   Q9W1H5   Q52KA4   A0A182GF77   A0A1I8N5D9   A0A182JFE2   A0A023EU20   A0A182GHH4   A0A1W4UMK9   A0A1J1IHV5   A0A1A9WP54   A0A1A9Y6H9   A0A1B0BI89   A0A0P6DTF4   A0A0N8C3I2   A0A0N8EC61   A0A0N8CBQ2   A0A1A9UJ05   A0A182NF54  

PDB

2LYD     E-value=5.94001e-38,     Score=395

KEGG

101745129    K12611 mRNA-decapping enzyme 1B [EC:3.-.-.-] | (RefSeq) mRNA-decapping enzyme 1B

PATHWAY

03018    RNA degradation - Bombyx mori (domestic silkworm)

GO

GO:0000290   GO:0008047   GO:0031087   GO:0000932   GO:0032440   GO:0043186   GO:0045451   GO:2000637   GO:0035195   GO:0010603   GO:0042802   GO:0000956   GO:0005737   GO:0043085   GO:0004637   GO:0009113   GO:0005524   GO:0046872   GO:0009058   GO:0016742   GO:0003824  

PANTHER

PTHR16290  

Length:

402

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01039

outside

1  -  402

 

 

Pi

204.084693

Theta

142.079348

Tajima's D

0.079348

CLR

0

CSRT

0.390230488475576

Interpretation

Uncertain