SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04291  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014573
Annotation
PREDICTED:_ankyrin_repeat_domain-containing_protein_13D-like_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 2.46
 

Sequence

CDS
ATGATACACAGGAACAAAAGCGGCATCTGGGGCTGGCGGCAAGACAAGACCGAGCCAGTCAACGGGTACGAGTGCAAGGTGTTCAGCGCCAATAACGTGGAGCTCGTCTCCAAGACTCGCACCGAGCATCTGGACAAGGCGCGGCGCTCCAGCCCCCGGGCTCCGCTGGCGGGGCTGCTGGCGCTCGCGGACTCCGACACCAGCGCGCCCTCTACCCCGCTCCTCACTCCTGAAACGGAAGAGCCTCCGCGCAGTAGGTCCCGTGAAGAGTTGAATGTGGTATCCTGGGAGGAGTACTTCTCTGGGGAGGCGATGGAGAGGGACATCGGGAGGCCGAAGGAGATGACCGAGAAAGTGCAAAAGTTCAAAGCCACTCTTTGGTTGTGCGAAGACTATCCATTGGAGCTGCAAGAGCAAATAATGCCGATATTGGATTTGATGGCCGCTATATCCTCGCCTCACTTCGCGAAGCTGAAGGACTTCATACAGATGCAGCTCCCGGCTGGGTTCCCAGTTAAAATAGAGATCCCGCTGTTCCACGTGCTGAACGCGCGCATCACGTTCGGCAACATCTTCGGCACGGAGAGCGGCGCGGCGCACGTGCAGTGCATCGCGGAGGGGCGGCGCGCGGCGTGCGTGCTGGACGACGCGTGCTTCGAGCTGGGCCGCGGCTACCGGGACGCCGCCGCGCCCGAGCCGCGCGGGGAGATGGACCACGACGAGCGCCTCATGCACTACGCCATACAGCAGAGCCTCATGGACGCCGGCACGCACGACGACCAGGTGGACGTGTGGGAGGCGCTGCGGGGCGCGCGGCCCCCCTCGCCGCTGCACGAGACGCAACTACAGAGGTACGAACGCTGTTATATCTTATCTTATCTTATATCTTTAAACGAGCAATTCTTGTATATATAA
Protein
MIHRNKSGIWGWRQDKTEPVNGYECKVFSANNVELVSKTRTEHLDKARRSSPRAPLAGLLALADSDTSAPSTPLLTPETEEPPRSRSREELNVVSWEEYFSGEAMERDIGRPKEMTEKVQKFKATLWLCEDYPLELQEQIMPILDLMAAISSPHFAKLKDFIQMQLPAGFPVKIEIPLFHVLNARITFGNIFGTESGAAHVQCIAEGRRAACVLDDACFELGRGYRDAAAPEPRGEMDHDERLMHYAIQQSLMDAGTHDDQVDVWEALRGARPPSPLHETQLQRYERCYILSYLISLNEQFLYI

Summary

EMBL
BABH01043411    KQ460211    KPJ16566.1    GDQN01006913    JAT84141.1    RSAL01000048    + More
RVE50466.1    KZ150021    PZC74891.1    AGBW02009971    OWR49450.1    KQ459580    KPI99355.1    NWSH01006751    PCG63266.1    KK107536    EZA49189.1    KK852704    KDR18063.1    GL888206    EGI65149.1    GBYB01002227    JAG71994.1    KZ288405    PBC26188.1    KQ981427    KYN41770.1    ADTU01017593    KQ976453    KYM85374.1    GBYB01002228    JAG71995.1    GBYB01002226    JAG71993.1    KQ971362    EFA08921.1    GL443548    EFN61909.1    GL450311    EFN81198.1    NEVH01024944    PNF16606.1    KQ978317    KYM95175.1    QOIP01000008    RLU19808.1    GECU01036767    JAS70939.1    KQ414632    KOC67225.1    PNF16605.1    NNAY01005456    OXU16666.1    GECZ01015133    JAS54636.1    KQ434874    KZC09740.1    GALX01002937    JAB65529.1    MWRG01003984    PRD30938.1    GBGD01000915    JAC87974.1    GEDC01021110    GEDC01009121    JAS16188.1    JAS28177.1    GDIQ01172257    JAK79468.1    GEDC01022029    JAS15269.1    KQ435922    KOX68520.1    GEDC01020952    GEDC01016420    GEDC01011422    GEDC01008754    GEDC01002673    GEDC01001559    GEDC01001198    JAS16346.1    JAS20878.1    JAS25876.1    JAS28544.1    JAS34625.1    JAS35739.1    JAS36100.1    GDIP01165636    JAJ57766.1    GFTR01007363    JAW09063.1    GDIP01087446    JAM16269.1    GDIP01112943    JAL90771.1    GDIQ01084754    JAN09983.1    GECL01001203    JAP04921.1    APGK01040123    KB740975    KB632267    ENN76564.1    ERL91009.1    GBBI01003069    JAC15643.1    GDIQ01187550    JAK64175.1    GDIP01064151    JAM39564.1    GDIP01184728    JAJ38674.1    GDIP01044594    JAM59121.1    GDIQ01241436    JAK10289.1    GDIQ01182360    JAK69365.1    GDIQ01241435    JAK10290.1    GDIP01211634    JAJ11768.1    GDIP01139738    JAL63976.1    GDIQ01192808    JAK58917.1    GDIP01064150    JAM39565.1    GDIQ01242835    JAK08890.1    GDIQ01239891    JAK11834.1    LJIG01022525    KRT80121.1    GDIP01200581    JAJ22821.1    GDIP01119485    JAL84229.1    GDIQ01244043    JAK07682.1    GDIP01240027    JAI83374.1    GDIP01093385    JAM10330.1    GDIP01164887    JAJ58515.1    QCYY01003054    ROT65692.1    GDIQ01036363    JAN58374.1    GDIP01163032    JAJ60370.1    GDIP01240026    JAI83375.1    GDIP01221088    JAJ02314.1    GDIP01166428    JAJ56974.1    GDIP01093384    JAM10331.1    GDIP01221089    JAJ02313.1    GDIP01064149    JAM39566.1    GDIQ01092448    JAL59278.1    GDIQ01075791    JAN18946.1    GDIQ01253498    GDIQ01244041    GDIQ01205509    GDIQ01197953    GDIQ01196451    GDIQ01033819    JAJ98226.1    GDIP01036105    JAM67610.1    GDIP01232431    JAI90970.1    GDIP01219928    JAJ03474.1    GDIQ01061900    JAN32837.1    GDIQ01230133    JAK21592.1    GDIP01157641    JAJ65761.1    GDIQ01092449    JAL59277.1    GDIQ01182359    JAK69366.1    AJWK01019191    AJWK01019192    GDIP01036104    JAM67611.1    GDIQ01200556    JAK51169.1    GFDF01004226    JAV09858.1    GDIP01219929    JAJ03473.1    GDIP01102934    JAM00781.1    GDIP01219930    JAJ03472.1    GDIQ01244042    GDIQ01203857    JAK47868.1    GDIP01037259    JAM66456.1    GDIP01138638    JAL65076.1   
Pfam
PF11904   GPCR_chapero_1        + More
PF12796   Ank_2
PF00023   Ank
PF02809   UIM
Interpro
IPR021832   ANKRD13        + More
IPR003903   UIM_dom       
IPR036770   Ankyrin_rpt-contain_sf       
IPR020683   Ankyrin_rpt-contain_dom       
IPR002110   Ankyrin_rpt       
SUPFAM
SSF48403   SSF48403       
Gene 3D

Ontologies

Topology

Length:
304
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01826
Exp number, first 60 AAs:
0.00012
Total prob of N-in:
0.05992
outside
1  -  304
 
 

Population Genetic Test Statistics

Pi
250.404364
Theta
151.899825
Tajima's D
2.179942
CLR
0.236265
CSRT
0.910954452277386
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 ITFDIGDIYPIK 100.00 6e-11
27530593 RPLSEPPSPAHSRA 100.00 6e-05
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号