SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04289  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014574
Annotation
PREDICTED:_lipase_1-like_[Bombyx_mori]
Full name
Lipase      
Location in the cell
PlasmaMembrane   Reliability : 1.417
 

Sequence

CDS
ATGGTATATACGAGTGCAATTTTCCACCTGGTCATGATGATACTCCTGTATCTGAGTAGTACTGGTTATTCACTCACTCCAATTGTGGAAGATCTCTTTTTGGAAAAGCTTGGAGGTGACGTGTTAAGGGAGTTTCCAAAACTAGATGAGAACGTGATCAAAATTAATGTACCAGCAGACGCTAAGCTGAACTTCAACGCTCTCGCCGCGAAATACGGGCACCCGTGCGAGGAACATTATGTCGAGTCAGAGGACGGTTATGTAACCAAGTTATTTCATTTACCGGGAGACAGGAAACGGCCGGTGCTCATGATGCACGGCCTCTTCGAATCTGCTGATACTTTTATCATCAGAGGCAACAGATCAATGGCGATATCCCTCGCGAACGCTGGCTACGACGTGTGGCTGGGAAACATGAGAGGAAACAAACATTCCCGGAGACACGTTACTCTGAATCCCGACAAAGATGCCGAATTTTGGAACTTCAGTTACCACGAAATGGCGTTGTACGATCTACCTGCGACTATCGACTACATCCTGGGTCACACCGGCCAGACACAGATCTATGGTATCGCCCATTCTCAGGGCAACAATATTTTCTTCGCAATGACAGCAATGTTGCCACAATATAACACAAAGATCAGGGTTTTGATTTCGTTAGGACCGGCAGTCCATATTGAGAATATTAAATCGCCGACGAAAATACTAGTTCAGCTGTCTCCTCTTATAAACTATCTGTTCGAAGGGATCGGCAATGAGGAAATTTTGCCGGAGGGGGAAATTCTTAGGAGCCAACTGCAAAAAGTCTGCCCCTTAGGATTGCCGGGATATGTTTTATGCGTTCAGTTGATTATATTTCAACTAGCCGGTTACAATACGGCAGAACTGGAGCAAGAATTCTTCCCGGTTGTACTCGGTCATAGCCCCAGTGGAACTTCAAGGAAAAACTTCAATCATTTAGTACAGTCGGGGAAATACAAGCGTTTTGCTTATTACGATGCCGGCGCTGAAGAAAATATCCGACTATATGGAAGAGAGGAACCTCCTTTGTACGATCTCAGCGTGGTCACCATGAAGGTGGCTATTTTTGCTGGAAACAACGACAAATTGGTCGTTCTCAAGGATACCGAGAGACTGCGAGACGAGCTGACAAATGTTGTCGAGTACAGGGTATTGGAACCGAGAAAATGGAATCACTTGGATTTCGTATGGGGGAGGAATGCCAACAAGTTTTTGTTTCCATATATTTTTGAATTGCTGCACAAATATTAG
Protein
MVYTSAIFHLVMMILLYLSSTGYSLTPIVEDLFLEKLGGDVLREFPKLDENVIKINVPADAKLNFNALAAKYGHPCEEHYVESEDGYVTKLFHLPGDRKRPVLMMHGLFESADTFIIRGNRSMAISLANAGYDVWLGNMRGNKHSRRHVTLNPDKDAEFWNFSYHEMALYDLPATIDYILGHTGQTQIYGIAHSQGNNIFFAMTAMLPQYNTKIRVLISLGPAVHIENIKSPTKILVQLSPLINYLFEGIGNEEILPEGEILRSQLQKVCPLGLPGYVLCVQLIIFQLAGYNTAELEQEFFPVVLGHSPSGTSRKNFNHLVQSGKYKRFAYYDAGAEENIRLYGREEPPLYDLSVVTMKVAIFAGNNDKLVVLKDTERLRDELTNVVEYRVLEPRKWNHLDFVWGRNANKFLFPYIFELLHKY

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Feature
chain  Lipase
EMBL
BABH01043411    BABH01034815    BABH01038893    BABH01038894    KQ459580    KPI99336.1    + More
JTDY01008561    JTDY01003454    KOB64514.1    KOB69530.1    KQ460480    KPJ14361.1    ODYU01002476    SOQ40012.1    JTDY01007194    KOB65389.1    GDQN01001224    JAT89830.1    KZ150080    PZC73881.1    BABH01032765    BABH01038896    AGBW02010690    OWR48036.1    KQ461196    KPJ06301.1    BABH01032763    JTDY01002846    KOB70611.1    AK403268    BAM19670.1    AGBW02011015    OWR47367.1    KPI99333.1    AGBW02008642    OWR52889.1    BABH01038949    OWR48034.1    GAIX01002709    JAA89851.1    GDRN01044880    JAI66895.1    NWSH01002215    PCG68894.1    GALX01003535    JAB64931.1    LJIJ01000666    ODM95481.1    NEVH01009768    PNF32784.1    KQ982580    KYQ54458.1    CP012523    ALC38095.1    LNIX01000009    OXA50396.1    GL445305    EFN89852.1    JXUM01107700    KQ565165    KXJ71265.1    CH933807    EDW12729.2    EDW12728.1    KK853197    KDR09957.1    ODYU01011128    SOQ56675.1    ADMH02001587    ETN61958.1    EDW12727.1    KRG03395.1    KQ979657    KYN19900.1    DS231848    EDS36642.1    LJIJ01000475    ODM97066.1    KQ981523    KYN40354.1    AXCN02000090    KK852827    KDR15388.1    CM002910    KMY89574.1    GDHF01022533    JAI29781.1    CH916368    EDW03602.1    NEVH01011896    PNF31184.1    EDW12735.1    JTDY01004649    KOB67911.1    KQ976755    KYN08590.1    CH480818    EDW52462.1    KQ976731    KYM76202.1    NWSH01002126    PCG69082.1    AAAB01008820    EAA05393.4    APCN01002227    PCG68895.1    ODYU01004246    SOQ43916.1    ADTU01007002    AE014134    AY089586    AAF52971.1    AAL90324.1    KQ460855    KPJ11879.1    KMY89575.1    AAF52978.1    AGB92892.1    AY089450    AAL90188.1    CH940649    EDW64189.1    AGB92891.1    KQ459193    KPJ03000.1    EDS36638.1    KQ461072    KPJ09861.1    CH954177    EDV59018.1    NEVH01021196    PNF20013.1    LJIG01001091    KRT85849.1    CH902620    EDV32370.2    ABLF02039332    CH963857    EDW76535.2    KK853131    KDR10945.1    ADV37035.1    CM000157    EDW87962.1    CH477866    EAT35491.1    EDV59009.1    CH478517    EAT32843.1    LNIX01000004    OXA56097.1    EDW52471.1    AAAB01008879    EGK96944.1    GEDC01029317    GEDC01024313    GEDC01024096    GEDC01020251    JAS07981.1    JAS12985.1    JAS13202.1    JAS17047.1    EDW76533.1    KQS70596.1   
Pfam
PF00561   Abhydrolase_1        + More
PF04083   Abhydro_lipase
PF12146   Hydrolase_4
Interpro
IPR025483   Lipase_euk        + More
IPR000073   AB_hydrolase_1       
IPR029058   AB_hydrolase       
IPR006693   AB_hydrolase_lipase       
IPR022742   Hydrolase_4       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
1K8Q     E-value=1.62745e-53,     Score=530

Ontologies

Topology

SignalP
Position:   1 - 24,         Likelihood:  0.903686
 
 
Length:
423
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.72943
Exp number, first 60 AAs:
22.39304
Total prob of N-in:
0.98770
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  423
 
 

Population Genetic Test Statistics

Pi
246.569812
Theta
162.936175
Tajima's D
1.845436
CLR
0.189791
CSRT
0.857607119644018
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 VFISIAPAVHIENIK 100.00 2e-08
24093152 YGGDVVIQCR 100.00 2e-08
26822097 EPPIYDISVVTMK 100.00 0.001
26822097 IRDEITNVVEYR 100.00 0.008
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