SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04288
Pre Gene Modal
BGIBMGA012649
Annotation
PREDICTED:_lipase_3-like_[Bombyx_mori]
Full name
Lipase      
Location in the cell
PlasmaMembrane   Reliability : 2.799
 

Sequence

CDS
ATGATATTTCCGAGTCTGATTTTTAAAATTGCGTTCATTTTACTCGTCGCCTTTTTAAATAAAGTTTCTAATTCACTTATAGACTCACCGATCTTGGAAAGCATTCCAGGAGACATTGCCATTGAACAAAACGATTTCGTAAAATCGTACGGTTTGGATCCGGTAGGGAATTTAGTGTCCATTGAAGTACCCGAAGACGCTAACCTTGATTTCAACGGTCTCGCCAAGAAGTACGGGCATCCGTGCGAAGAGCATTACATCGAGTCAGAGGATGGTTATATCACCAAGTTATTTCATTTACCGGGAGATAAGAAACGGCCGGTACTCATGATGCACGGCATCTTCGATTCTGCCGATACTTTTATCATCAGAGGCAACAGATCAATGGCCATATCCCTCGCGAACACTGGCTACGACGTGTGGGTGGGAAACATGAGAGGAAACAAACATTCCCGGAGACACGTTACTCTGAATCCCGACAAAGATCCTGAATTTTGGAACTTCAGTTACCACGAAATGGCGTTGTACGATCTACCTGCGACTATCGACTACATCCTGGGTCACACCGGCCAGACACGGATCTATGGTATCGGTCATTCCCTGGGCAACAGTATTTTCTTTGCAATGACGTCAATGTTGCCACAATATAACAAAAAAATCAGGATTTTCATTTCGTTAGCACCGGCTGCTCACCTTGACAATATTAAATTGCCGACAAGAATACTGGCTGTGCTATCTCCCCTTAACAACTATTTGTTGAAAGGTACTGGGCAAGAGGAAATACTTGCGGATTCAACTATCCTGTTTAAAATTTTACGAAAAGTTTGTCCGATTGGTCTGCCTGGATATATTTTATGCGCTGAATTGATTATATTTTACATAGGTGGCTACGATAGGGCAGAACTAGAGCGTGAATTCTTGCCGGTCGTTATAGGTCATGTTACCAGTGGTACCTCAAGGAAAAACTTCATTCACTTGGCGCAGTCGGGTAAATACAAACGTTTCGCACGTTATGATGCCGGAGTCAAAGAAAATCTTCGTGTATACGGAGCCAAGGTACCTCCGGCGTATAATATCAGTGCGGTGACCATGAAAGTAGCTATTTTTGCGGGAAATAACGACAAAATAGTCGTTGTGAAGGACACAAAGAGACTACGAGATGAGTTGAATAATGTAGTGGAATACAGAGTATTGAAACCAAATAAAATTAGCCACTTTGACTTCGTATGGGGAAGGAACGCTAACAGATATTTGTTTCCATTCATATTTGATTTGTTATCGAGTTACTAA
Protein
MIFPSLIFKIAFILLVAFLNKVSNSLIDSPILESIPGDIAIEQNDFVKSYGLDPVGNLVSIEVPEDANLDFNGLAKKYGHPCEEHYIESEDGYITKLFHLPGDKKRPVLMMHGIFDSADTFIIRGNRSMAISLANTGYDVWVGNMRGNKHSRRHVTLNPDKDPEFWNFSYHEMALYDLPATIDYILGHTGQTRIYGIGHSLGNSIFFAMTSMLPQYNKKIRIFISLAPAAHLDNIKLPTRILAVLSPLNNYLLKGTGQEEILADSTILFKILRKVCPIGLPGYILCAELIIFYIGGYDRAELEREFLPVVIGHVTSGTSRKNFIHLAQSGKYKRFARYDAGVKENLRVYGAKVPPAYNISAVTMKVAIFAGNNDKIVVVKDTKRLRDELNNVVEYRVLKPNKISHFDFVWGRNANRYLFPFIFDLLSSY

Summary

Similarity
Belongs to the AB hydrolase superfamily. Lipase family.
Feature
chain  Lipase
EMBL
BABH01038893    BABH01038894    BABH01034815    BABH01043411    KQ459580    KPI99336.1    + More
KQ460480    KPJ14361.1    JTDY01008561    JTDY01003454    KOB64514.1    KOB69530.1    GDQN01001224    JAT89830.1    JTDY01007194    KOB65389.1    ODYU01002476    SOQ40012.1    BABH01032765    KQ461196    KPJ06301.1    KZ150080    PZC73881.1    AGBW02010690    OWR48036.1    BABH01038896    AK403268    BAM19670.1    KPI99333.1    JTDY01002846    KOB70611.1    AGBW02011015    OWR47367.1    AGBW02008642    OWR52889.1    BABH01032763    BABH01038949    OWR48034.1    NWSH01002215    PCG68894.1    GAIX01002709    JAA89851.1    PCG68895.1    GL445305    EFN89852.1    KQ982580    KYQ54458.1    JTDY01004649    KOB67911.1    LNIX01000009    OXA50396.1    LJIG01001091    KRT85849.1    GALX01003535    JAB64931.1    LJIJ01000666    ODM95481.1    KK852827    KDR15388.1    KQ981523    KYN40354.1    KK853131    KDR10945.1    NEVH01009768    PNF32784.1    KQ979657    KYN19900.1    GDRN01044880    JAI66895.1    ADMH02002130    ETN58533.1    CH933807    EDW12735.1    ABLF02039332    NEVH01011896    PNF31184.1    ADTU01007002    KQ976755    KYN08590.1    AGBW02010351    OWR48653.1    GBYB01007122    JAG76889.1    LJIJ01000475    ODM97066.1    GECU01030185    JAS77521.1    KQ976731    KYM76202.1    LNIX01000004    OXA56097.1    GL887707    EGI70294.1    GEDC01029317    GEDC01024313    GEDC01024096    GEDC01020251    JAS07981.1    JAS12985.1    JAS13202.1    JAS17047.1    JXUM01107700    KQ565165    KXJ71265.1    NWSH01002126    PCG69082.1    ADMH02001587    ETN61958.1    DS234991    EEB09972.1    GECZ01012738    JAS57031.1    CH940649    EDW64189.1    NWSH01000119    PCG79374.1    KQ982409    KYQ56662.1    KK853197    KDR09957.1    KQ460855    KPJ11879.1    LJIG01001092    KRT85848.1    ODYU01011128    SOQ56675.1    KQ978747    KYN28654.1    GDHF01006507    JAI45807.1    KQ460949    KPJ10406.1    QCYY01001042    ROT80984.1    PNF31187.1    KYN40355.1    KZ150291    PZC71579.1    GL445725    EFN89157.1    EDW12727.1    KRG03395.1    JTDY01001496    KOB73727.1    CH480818    EDW52462.1    KQ977720    KYN00465.1    KK852794    KDR16428.1    CM002910    KMY89574.1    NEVH01014836    PNF27554.1    KYN08589.1    CH477866    EAT35491.1    CH478517    EAT32843.1    GDHF01022533    JAI29781.1    PNF32787.1    KZ149971    PZC76037.1    KQ981685    KYN38026.1    DS231848    EDS36642.1    GAMC01007031    JAB99524.1    JXJN01010106    QOIP01000012    RLU16237.1    KQ971338    EFA02315.1    EGI70293.1    AXCM01003911    KYQ54457.1    KMY89575.1    GL441846    EFN64155.1   
Pfam
PF00561   Abhydrolase_1        + More
PF04083   Abhydro_lipase
PF12146   Hydrolase_4
Interpro
IPR000073   AB_hydrolase_1        + More
IPR025483   Lipase_euk       
IPR029058   AB_hydrolase       
IPR006693   AB_hydrolase_lipase       
IPR022742   Hydrolase_4       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
1K8Q     E-value=1.09421e-49,     Score=497

Ontologies

Topology

SignalP
Position:   1 - 25,         Likelihood:  0.910572
 
 
Length:
429
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
14.7135
Exp number, first 60 AAs:
2.14585
Total prob of N-in:
0.11038
outside
1  -  429
 
 

Population Genetic Test Statistics

Pi
251.807006
Theta
150.121021
Tajima's D
2.075264
CLR
37.141747
CSRT
0.896555172241388
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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