Gene
KWMTBOMO04267
Pre Gene Modal
BGIBMGA014272
Annotation
PREDICTED:_uncharacterized_protein_LOC101736090_[Bombyx_mori]
Full name
Transporter
Location in the cell
PlasmaMembrane Reliability : 3.458
Sequence
CDS
ATGGACGGTACAAACACTCGTACTAAACAGGTTTTCACTACGAGAGAAATAGAAAACAAAGAGTTCGTTCAATGGGCACAATGCGGCGAAGGTCTGGTCACGGCGGCCCCGACGGTGTTGTGGGCGGTTGGCGCCGTGCTGCTGGCGCAGAGAATGATCGCGGCCTTGTTCAGACGTTTCGCGTTCCGTAGGGTTCCGTTTTGGGAGCTGGTTTTGCAAAATCTCCTTTTCCTGTGGATGGTGATCTACAGCTTACATTTCTGGGCGGTGCTGGTGAAAATCGCGAAATCTGTAGTCGAATATACTTATACAAATCTTGATAACAGTGTCGGTCCAGAAGACGCAGAGAGCTGTCAGCTCATGCAGCTGTGGGTCGTCTGGATGCTCGCGGCCGGACCCCTGGCTTATTATCTATACACGAGAGCGAAGCCAGAGAGTCAGCCGCTCATGATATGGATCACGACGAACCCGTGGCAGCGCCGCGAGATGGGCCCGTACGGCTACTACCTGAACCGGCCGCCCTCCGCGGAGCGTCGCCCGAGCGACTCCGGGCAGCGGCCCTGCGCCCTCCGCCGGGCCCTCAGCGACTCCACGGTTATCAGAGATGGGCCCAGAAAAAAACGATACTCCAAGTCTGTGTAG
Protein
MDGTNTRTKQVFTTREIENKEFVQWAQCGEGLVTAAPTVLWAVGAVLLAQRMIAALFRRFAFRRVPFWELVLQNLLFLWMVIYSLHFWAVLVKIAKSVVEYTYTNLDNSVGPEDAESCQLMQLWVVWMLAAGPLAYYLYTRAKPESQPLMIWITTNPWQRREMGPYGYYLNRPPSAERRPSDSGQRPCALRRALSDSTVIRDGPRKKRYSKSV
Summary
Similarity
Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
Uniprot
EMBL
Proteomes
Pfam
PF00209 SNF
SUPFAM
SSF161070
SSF161070
ProteinModelPortal
Ontologies
PANTHER
Topology
Length:
213
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
60.34788
Exp number, first 60 AAs:
18.64612
Total prob of N-in:
0.15171
POSSIBLE N-term signal
sequence
outside
1 - 31
TMhelix
32 - 49
inside
50 - 69
TMhelix
70 - 92
outside
93 - 119
TMhelix
120 - 139
inside
140 - 213
Population Genetic Test Statistics
Pi
359.681021
Theta
170.302876
Tajima's D
3.16975
CLR
0.181976
CSRT
0.986700664966752
Interpretation
Uncertain
