SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04263  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA014269
Annotation
PREDICTED:_uncharacterized_protein_LOC101735738_isoform_X2_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.695
 

Sequence

CDS
ATGTCCGTTCGCTTCGTGCGCACGATTCTCGTGCTACTAGCGATCGTTCACAATTCGCGCGCTCTAGTCGATGAAGTCGTCGACGTACTCAAACTCGGGAAGGAGATAGGCGAAGAGATAATCGCATCATGGAACGTTGTAGGAAAGACGCTAAACGTATCGGAGGGCGTCGAACTCCCCCTAATCAGAAGACGTGAAAGATTAATACTGGCAAAACTCTCGCATATATCGCAATCGATCGACAGATTGGAGCTGGGAATAGAGAAGGCCGGTGCGGTGGCCTTGTTCCTGGCCAAGAACGGAGGGAGAGGAACCCGTTTTGAGTTGAAACTGCACGACATGACGGTCCTTCTGAACAAAGTGGCGGCAGTGGACAGACAGATGAGAGTGTACGTCGGCCTTCAAGAGGAATTGGAGCGAAGCACGTTGTTAGGCTTTGCTCAATCGTGTGTCTTTTACGAGCCGGATGCGCTACCTGGCGTGCTGGAGCAGATACACGCGCACATTGTTCCACCCCATAAGCTATTGTTAGGCAAGGGCCTTCTGCAGCAAATCGTCGAGGAAGTTCAGGTTGGTACAACACTGTATGAGAATTGTAACTTTGATACGTTATTATGA
Protein
MSVRFVRTILVLLAIVHNSRALVDEVVDVLKLGKEIGEEIIASWNVVGKTLNVSEGVELPLIRRRERLILAKLSHISQSIDRLELGIEKAGAVALFLAKNGGRGTRFELKLHDMTVLLNKVAAVDRQMRVYVGLQEELERSTLLGFAQSCVFYEPDALPGVLEQIHAHIVPPHKLLLGKGLLQQIVEEVQVGTTLYENCNFDTLL

Summary

EMBL
BABH01032787    ODYU01002512    SOQ40105.1    KQ459580    KPI99342.1    KZ150080    + More
PZC73896.1    KZ150021    PZC74905.1    KQ460480    KPJ14355.1    JTDY01005861    KOB66538.1    GAIX01006098    JAA86462.1    AGBW02011366    OWR46777.1    GDQN01001449    JAT89605.1    GDQN01003016    JAT88038.1    KB631763    ERL85943.1    UFQS01000919    UFQT01000919    SSX07672.1    SSX28010.1    KQ971357    EFA08553.2    SSX07671.1    SSX28009.1    KQ981490    KYN41387.1    GBXI01017201    JAC97090.1    GECZ01030212    JAS39557.1    GL435311    EFN73534.1    AJVK01002938    GEDC01015607    JAS21691.1    GEDC01029098    GEDC01001492    JAS08200.1    JAS35806.1    GAMC01007152    JAB99403.1    GEZM01013042    JAV92797.1    CVRI01000035    CRK92910.1    LBMM01000713    KMQ97670.1    CH963925    KRF98860.1    CH954180    EDV47520.2    ADTU01013733    GDHF01018860    JAI33454.1    GAKP01003249    JAC55703.1    JXJN01007607    CM000162    EDX02318.2    KY563580    ARK19989.1    KQ978287    KYM95616.1    GECU01020541    JAS87165.1    GDHF01030882    JAI21432.1    CH902622    EDV34390.2    AE014298    AY058541    AAF46301.1    AAL13770.1    KQ979479    KYN21359.1    CH480865    EDW53677.1    PYGN01000697    PSN42087.1    KA645693    AFP60322.1    CH940653    EDW62580.2    CCAG010012254    CH933811    EDW06299.2    DS232047    EDS33064.1    CP012528    ALC48651.1    CH916371    EDV91735.1    KK853387    KDR07959.1    NNAY01000179    OXU30262.1    JXUM01016245    JXUM01016246    JXUM01016247    JXUM01016248    JXUM01016249    KQ560453    KXJ82341.1    KQ982430    KYQ56572.1    CH379063    EAL32401.3    JRES01000987    KNC26404.1   
Pfam
PF16061   DUF4803
Interpro
IPR032062   DUF4803       

Ontologies

Topology

SignalP
Position:   1 - 21,         Likelihood:  0.901855
 
 
Length:
205
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0747600000000001
Exp number, first 60 AAs:
0.07409
Total prob of N-in:
0.08478
outside
1  -  205
 
 

Population Genetic Test Statistics

Pi
163.596122
Theta
192.824043
Tajima's D
-0.463641
CLR
0
CSRT
0.242837858107095
Interpretation
Uncertain
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