Silkworm Genome Informatics Database

Gene

KWMTBOMO04262

Pre Gene Modal

BGIBMGA014234

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Amyelois_transitella]

Location

Bomo_Chr8(-):1298240-1311929 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.189

CDS

ATGACCTACATCCAGGCGAACTTCTGCAATTCGATGGTCGACATGGACATCTACTGGCTGCAGATATGCGCCGCCCACCTGCCGCCGGACCAGTTCATGGACATGTGCATTGACATGTTCGGAGTCCGGGAGTGGTTGAGCATGCTGCCCATGTCGCCGGTGCAGGCGGCCGAGCAGGACGCCATGGTCGAGGGCCTGCTCACGTTCCTGGCGATACTGGTCTCCTCCAGGACCAACCTGGGCAACGACGAGCTCACGCAGTCCCGGCTGGAGGTGAGCACGCTGCTGGCCGCCGGCGACAAGACGCACTCGCAGCTGCTGGAGCTCATGCCCGAGCGCTCCGGGAACGCGCACACCAAGAACTTCGAGACCGTGCTCAAGGAGCTGTCCACGTACCGGCCGCCGCCCCGGGGCTCCGAGAACCTGGAGCAGGGGCTGTTCGTGCCGCGCCCCGTCGTGTGGGAGCAATACTACGACCCGCTGCACGTGCTGCGCCGCGCCGTGCACCGCCGCGACTTCCACGCCTCCATGGAGCGCTACACGGCCTACGTCCGGGAGAAGAGGAAGGGAGCGGGCTCGGCGGCGCGCCTGGGCACGCTGTGGCCCCCCCTGCGCGCGCCGCCCGGCCCCGCGCCCCCCGGCGCCGGCGACCCGCGCGCCGTGTGCCGCAGCGGCGTGCTGCTGGGCGCGCTGCTGGCCGTGCTGCACCGCGCCGTGCACCGCCGCGCCGCCGACCAGCCGCCGCCGCACGCGCCGCCCGACCACGTGCTGGCGCTGGCGCTGCACCTGCTGGACGCGGCGCTGGCGCCCGGCGCGCCCGCGGACCCGCGCAGCGCGGTGCTGCAGCGCGAGGAGGGCGCGGCGCGCTGCGTGTCGGGCGCGGCGCTGCTGCGGGCGCTGGGCGGCGCGTGCCCCACGCAGGCGGCGTGCACGCGCGTGCTGGCCGTGCCGCGCCCCGCGCCCCGCCCCGCGCCGCCCGCGCACTACGCGCCCGTCGACAGCGACACGGAGTGGGAGTCCTCGGAGCTGGAGCCGGCGCTGCTGTCGCTGCCCACGGCCCCCAGCACGGCGCTGGCGGTGCCCTCGCCGCGACAGGTGGCGCGCGGGGACTCCATGGCGGAGGACCGCTCCGACGACGCCGACGTCATGCCCTACGTGCGCGCACTCGAGGGGATCATGGAGGACGAGAGCCGCGCCCTGGTGCTGCAGGACTCCGAGATGAGCCTCGCGCTGCCCGCTGGCCCCCCGCGCGCCCCCCCGCCGCACCGCATCGACTATGACACGGAGGGTCCGGAGTGGGACGACGCCCCCGCGCTGCCCGCCCCCCCACACTTCGACCTGCCGTCCACCAGCAACCACGACACGCAGATGGAGCTGCAGAACCAGACGGAGGAGGACTCGATACCCGTGAACGAGTCCATAATATCGCTGCTGCTGAAGCTGCACTCGCAGCTGTCCGGCCGCCTCGACTCCTTCAGCCCCGACGAGCCCGCGCCCGCCGCGCACGAGCCCGTCGGCGACGGCCCGTTCTGGATCGGGCGCGTGCTGCGGCGCATGTGCAGCCTGGACCCGCGCTGCCGCCAGCACGTGCAGCACGTGCGCGAGCAGCTGTGGCCGCAGCAGCGGGAGCGCCACGCCGAGCACCTGGCCAGGGAACGCGCAGAGAAGGAGGAGCGGTCCAGGCGAGCTCGCGAGCGGCAGGAGCAAGTGATGCGCGAGTTCGCCGCGCGACAGCAACGGTTCCTGTCCAGCATGCGCGACATGGACGACGAGGAGTGGGTCGAGGAGCCGCTGGAGCCCGACTACACCTGCGTCATCTGCAACACGTGCGCGCCCGCCTCCGCCGCCGACCCCGTGGGGCTGGTGGTGCTGGTGCAGGCCAGCAGCGTGCTGGCGCACCGCGCGCCCGCCGGCTGCGAGCCCGCGCGCCTGCCGCTCACCGAGCCCGACCGCGCCCGCCTGCGCGCGCACCGCGACCGCACCGCCGGCCAGCACCAGGCGCGCGTGCTGGACGAGCTGCGCCAGCACTTCGACGGCGCCGGCGTGGACTCGTGGGAGGGCGGCGTGCACGTGCAGTCCTGCCAGCACCACCTGCACCTGCACTGTCTGCACGCCTACCTGCGCGCCCTGCACGCGCCGCGCCCGCACAACCTGCACGTGGAGCGCGGCGAGTTCCTGTGCCCGCTGTGCCGCCAGCTCGCCAACACCGTGCTGCCGCTGGCGCCGCGCCCCGCCCGCCCGCCGCGCCTGCCGCTGCCCGCCGCGCTGCCCGAGCCCGCGCCGCAGCCGGTGCGACACACGCCACTTGCACTCGACCACGCTGCGCCCACGAAGCTCTCGGAAGCGATGGGGAAGGCCATGGAGGACATCACGGCGGCCGCGGGGGGCAAGCTGAAGCAGCGGTACGGGTCCTCGCCCGCCGACATCTTCGCCTTCGTCACGTCCCTGGTGCGGACCAACCTGGAGTGCGAGCTGGTGCAGCGAGGAGGGACCCTGCTCACCGCGAGCGCGCCCAGATATAAACCTAGAAATGAGTGTATAGTGCCGCTGATGGTGGTGGCGGGCTTCCACAGCCGCGTGCTGAGCGCGGCGGGCGCGGGGCTGGGCGTGGCGGACACGTGGCGCCTCGTGTCGCCGCCCCCCGCCGCCCCCGCGCCCGCCGGCCCCGCCCCCGCCCCCGCGCTGGCCCCCGCGCCGCCCAGCGACGCGCGCCCCGTGCCCATCCTGCTCAAGGACCCGCTGGACCTGCTCATACAGCTGCTGCTAGTGGCGCCGCCCGACCCGCCGCACGTCGACATACAGGACTTTAATCTGATCGTGCGGCAACTGTACACCCTCACGTACTATCAAATAGTATGTCAGTTTTGTGCGAACGCGACGCCAGAGGAGAGGGCGGCGCTGGCGGCGGGGGGAGGGGGCGACGATGACGTCAGGACCAACGCCAGGGTCGTGCTGGCCGCCCTCGCCGACTCCGAGCTGTTCACTGAGGACGGGCCACCCGCGCAGGAGCAACCCGCGCCCATGGACTTCGAGAAACTTGAAGAAGAGTTGAAGCGGTTGTCGCTGCCGTTCCTGCGCGTGTGCGCCCTGCTGCGGCACCACATGTACGGCGCCGCGCTGCCGGACGTGGCGGCGCCCGAGCAGGAGTACGCGCGGCTGGCGCAGTACCTGGACCTTGGCGCGGCGGGGCGTGGCGCGGCGGGGCGGGGCGCGGCGCGCGGCTGGGCGCGGCAGCTGGGCGCGGCGGCGCAGCGCTCGCAGCTGGGCCTGCGGCGGCTGCTGCGCGCGCAGCACGTGGAGTGGGCGCCGCCCGCGCTGCTGGCGCTGCCGCACGAGTACGACCGGCTGTTCACGCACTACCACGAGCGCGTGTGCTCGCAGTGCGGCGCCGCGCCCAAGGAGGCGTCCGTGTGCCTGGCGTGCGGCACGCTGGTGTGCCTGAAGGCGGCGTGCTGCCGGCGGCACCAGGTGGCGGAGGCGGTGCGGCACGCGGCCCACTGCGGCGCCGGCACCGCCATCTTCCTGGTCGTCACCTCCACCTACATTATCGTCATCCGCGGCCGCCGCGCCTGCCTGTGGGGCAGCCTGTACCTGGACGACTACGACGAGGAGGACCGCGACCTCAAACGCGGCAAGCCCCTGTACCTCAGCCGGGACCGGCTCGAGCTGCTGCAGGCACAGTGGCTGGCGCACAGGTTCGACCACACGAAGCGGACCTGGGTCTGGCACCGGGACTCGCTCTAG

Protein

MTYIQANFCNSMVDMDIYWLQICAAHLPPDQFMDMCIDMFGVREWLSMLPMSPVQAAEQDAMVEGLLTFLAILVSSRTNLGNDELTQSRLEVSTLLAAGDKTHSQLLELMPERSGNAHTKNFETVLKELSTYRPPPRGSENLEQGLFVPRPVVWEQYYDPLHVLRRAVHRRDFHASMERYTAYVREKRKGAGSAARLGTLWPPLRAPPGPAPPGAGDPRAVCRSGVLLGALLAVLHRAVHRRAADQPPPHAPPDHVLALALHLLDAALAPGAPADPRSAVLQREEGAARCVSGAALLRALGGACPTQAACTRVLAVPRPAPRPAPPAHYAPVDSDTEWESSELEPALLSLPTAPSTALAVPSPRQVARGDSMAEDRSDDADVMPYVRALEGIMEDESRALVLQDSEMSLALPAGPPRAPPPHRIDYDTEGPEWDDAPALPAPPHFDLPSTSNHDTQMELQNQTEEDSIPVNESIISLLLKLHSQLSGRLDSFSPDEPAPAAHEPVGDGPFWIGRVLRRMCSLDPRCRQHVQHVREQLWPQQRERHAEHLARERAEKEERSRRARERQEQVMREFAARQQRFLSSMRDMDDEEWVEEPLEPDYTCVICNTCAPASAADPVGLVVLVQASSVLAHRAPAGCEPARLPLTEPDRARLRAHRDRTAGQHQARVLDELRQHFDGAGVDSWEGGVHVQSCQHHLHLHCLHAYLRALHAPRPHNLHVERGEFLCPLCRQLANTVLPLAPRPARPPRLPLPAALPEPAPQPVRHTPLALDHAAPTKLSEAMGKAMEDITAAAGGKLKQRYGSSPADIFAFVTSLVRTNLECELVQRGGTLLTASAPRYKPRNECIVPLMVVAGFHSRVLSAAGAGLGVADTWRLVSPPPAAPAPAGPAPAPALAPAPPSDARPVPILLKDPLDLLIQLLLVAPPDPPHVDIQDFNLIVRQLYTLTYYQIVCQFCANATPEERAALAAGGGGDDDVRTNARVVLAALADSELFTEDGPPAQEQPAPMDFEKLEEELKRLSLPFLRVCALLRHHMYGAALPDVAAPEQEYARLAQYLDLGAAGRGAAGRGAARGWARQLGAAAQRSQLGLRRLLRAQHVEWAPPALLALPHEYDRLFTHYHERVCSQCGAAPKEASVCLACGTLVCLKAACCRRHQVAEAVRHAAHCGAGTAIFLVVTSTYIIVIRGRRACLWGSLYLDDYDEEDRDLKRGKPLYLSRDRLELLQAQWLAHRFDHTKRTWVWHRDSL

Uniprot

A0A194Q1B0 A0A212EZ48

Pubmed

26354079 22118469

EMBL

KQ459580 KPI99341.1 AGBW02011366 OWR46778.1

Proteomes

UP000053268 UP000007151

Interpro

IPR039164 UBR1-like

ProteinModelPortal

A0A194Q1B0 A0A212EZ48

KEGG

101743077 no KO assigned | (RefSeq) zinc finger protein 431-like

GO

GO:0071596 GO:0016874 GO:0061630

PANTHER

PTHR21497

Length:

1247

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.19428

Exp number, first 60 AAs:

0.06857

Total prob of N-in:

0.00432

outside

1 - 1247

Pi

211.419609

Theta

167.880738

Tajima's D

1.009231

CLR

0.282567

CSRT

0.663316834158292

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics