Gene

KWMTBOMO04257

Pre Gene Modal

BGIBMGA014238

Annotation

Low_affinity_cationic_amino_acid_transporter_2_[Papilio_xuthus]

Location

Bomo_Chr8(-):1180391-1194535      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.888

CDS

ATGTGGTTTTTACTACGTGGTATAAAAGCCGGGGCGACTCATGCAGCCCGGCTCGCGTACCAGGTCCTCTCTCGACGTAAGGTTGCCGAGGAAGGCGCGGCTAGACTGGCAAGAGTCTTGACCGCCTTCGATCTGACAGCGTTAGGGGTCGGCAGCACTCTAGGAGTCGGAGTGTACGTGCTAGCTGGTGACGTGGCCAAGAACTATGCCGGACCAGCTGTGGTCATATCATTCTTGCTGGCCGCAGTGGCTAGTGTGTTTGCAGGCTTGTGCTATGCTGAGTTCGGTGCTCGCGTGCCGAAGGCGGGCTCGGCGTACGTGTACAGCTATGTGTGCGTGGGCGAGTTCATAGCTTTCATAATCGGATGGAATCTCATACTCGAATATATTATAGGCGCGGCGTCGGTGGTGAAGGCGCTGAGCGAGTACTTGGACTCGTTGCTGAACAAGGCGATCTCGTCGCACCTGGAGGCCGCGCTGCCCATCGACTCGCCGCACCTGGCCGACTACCCCGACGTCTTCGCCTTCTCCGTCATCATGGCTTTCTCTGTGGCGCTGTCGTTCGGCGTGAAGGAGTCCACGAAGTTCAACAATGTGTGCACCGCCATCAACCTCTGCGTCGTGCTCTTCGTCATCGTCTCCGGCTCGCTCAAGGCGGACACGAGCAACTGGCGCATTCCGGAGTCGGAGGTGCCCAAGGACGAGGGGCGGAGCTACGGCACCGGGGGGTTCGCGCCCTACGGACTCGCCGGCATCATCCGGGGCGCCGCCGTCTGCTTCTACGGGTTCATCGGGTTCGACTGCGTGGCGACGGCGGGCGAGGAGGCGCGGCGCCCGCAGCGCAGCATCCCGGCGGCCGTGGCGGGCTCGCTGCTCGTCGTGTTCCTGGCCTACTGCGGCGTGTCCTGCGTGCTCACGCTCGTGCTGCCCTACTACCTGCAGGACGAAAAAGCGCCATTCCCGTTTGTATACGATCGTCTAGGCTGGCCGTGGGCTAAGTATGCGGTCAGTGTTGGAGCCATATGCGCCCTGTGTTCAAGTTTGATGGGCGCGGTGTTCCCGTTGCCGCGGATCATCTACGCGATGGCGTCGGACGGGCTGCTGTTCCGGTGGCTGGGCCGCGTCAACGAGAAGTACCAGACGCCGCTCGTCGGGACCATCACGGCCGGCTTCCTCACCGGTACGTTGGCCATGATATTCAAACTGGAGCAGCTGATTCACATGATGTCCATCGGCACTTTGCTGGCGTATTCTATGGTCGCTTCGTGCGTGTTACTACTTAGGTGA

Protein

MWFLLRGIKAGATHAARLAYQVLSRRKVAEEGAARLARVLTAFDLTALGVGSTLGVGVYVLAGDVAKNYAGPAVVISFLLAAVASVFAGLCYAEFGARVPKAGSAYVYSYVCVGEFIAFIIGWNLILEYIIGAASVVKALSEYLDSLLNKAISSHLEAALPIDSPHLADYPDVFAFSVIMAFSVALSFGVKESTKFNNVCTAINLCVVLFVIVSGSLKADTSNWRIPESEVPKDEGRSYGTGGFAPYGLAGIIRGAAVCFYGFIGFDCVATAGEEARRPQRSIPAAVAGSLLVVFLAYCGVSCVLTLVLPYYLQDEKAPFPFVYDRLGWPWAKYAVSVGAICALCSSLMGAVFPLPRIIYAMASDGLLFRWLGRVNEKYQTPLVGTITAGFLTGTLAMIFKLEQLIHMMSIGTLLAYSMVASCVLLLR

Uniprot

A0A194Q2V8   A0A2H1VGY1   A0A3S2LWI7   A0A212F2R6   A0A2W1BMF0   A0A194QL91   + More
A0A2A4IXY9   A0A026W9I0   A0A1Y1KAP6   A0A1W4VSA6   B3M3U7   W8BRZ7   W8C1T2   E2AUA5   B3NDC1   A0A0Q5U4X9   Q9VVM0   B5RJ28   Q7KUR6   A0A0A1WH76   A0A0J9RXJ3   B4QPB9   A0A0J9RXE5   B4HLB6   A0A0K8VXE3   Q8MT96   A0A0R1DY18   A0A0K8VA69   B4PJH7   A0A0R3P519   Q2LZ14   A0A0R3P521   A0A3B0J4J8   A0A3B0JT08   B4GZR9   A0A1I8PFC7   A0A2A3EL75   A0A0M9A9K1   A0A0M3QWP9   A0A1W4XP81   B4N5H3   A0A151X255   A0A1A9ZS56   A0A158P296   A0A1B0FFA4   A0A1B0BPC9   A0A1A9UQJ3   K7J057   A0A1B0GHL5   A0A1A9WFH8   A0A151I0Y9   A0A232FBF3   A0A1I8MIN5   A0A0C9Q5K6   A0A1I8MIN2   A0A1I8MIN0   A0A087ZW64   F4W6J1   A0A195D310   A0A195FJ79   A0A212F0U3   A0A195E4W0   A0A0L7QPM2   E2C035   A0A1L8DEE8   A0A034VGR9   A0A0L0CD82   A0A0L0CRI8   A0A1Y0AWI8   E9IB29   A0A1I8PZF6   A0A336LCN3   A0A2J7R746   A0A2J7R739   A0A151WSG4   A0A195ET83   A0A151I7E1   A0A158NVX0   A0A026X573   F4X4X5   A0A2A3ERP8   A0A2J7R736   A0A151HYS8   A0A1I8MEN9   A0A087U8F1   A0A2J7R752   A0A2J7R757   A0A1L8ECN8   A0A2J7R774   A0A1Y0AWR5   A0A1L8EC89   A0A2J7R744   A0A0J9S020   B4IB57   A0A1Y1MQL8   A0A1Y1MQM0   A0A067RRF9   B4PJ49   A0A0R1E182   A0A0J7KAN6  

Pubmed

26354079    22118469    28756777    24508170    28004739    17994087    + More
24495485    20798317    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    25830018    22936249    17550304    15632085    21347285    20075255    28648823    25315136    21719571    25348373    26108605    28341416    21282665    30249741    24845553   

EMBL

KQ459580    KPI99334.1    ODYU01002476    SOQ40011.1    RSAL01000147    RVE45877.1    + More
AGBW02010690    OWR48035.1    KZ150080    PZC73890.1    KQ461196    KPJ06302.1    NWSH01005355    PCG64278.1    KK107323    EZA52608.1    GEZM01087622    JAV58563.1    CH902618    EDV39281.1    GAMC01006877    JAB99678.1    GAMC01006879    JAB99676.1    GL442815    EFN62962.1    CH954178    EDV51914.2    KQS44014.1    AE014296    AAF49291.2    BT044302    ACH92367.1    AAF49292.1    GBXI01016462    JAC97829.1    CM002912    KMZ00328.1    CM000363    EDX10913.1    KMZ00327.1    CH480815    EDW41936.1    GDHF01008762    JAI43552.1    AY118300    AAM48329.1    CM000159    KRK01979.1    GDHF01016849    JAI35465.1    EDW94665.2    CH379069    KRT08283.1    EAL29695.2    KRT08282.1    OUUW01000002    SPP76497.1    SPP76496.1    CH479199    EDW29496.1    KZ288215    PBC32460.1    KQ435713    KOX79276.1    CP012525    ALC44529.1    CH964101    EDW79612.1    KQ982580    KYQ54492.1    ADTU01007040    CCAG010000766    JXJN01017884    AJWK01005319    KQ976632    KYM78892.1    NNAY01000467    OXU28166.1    GBYB01009368    JAG79135.1    GL887707    EGI70326.1    KQ976885    KYN07288.1    KQ981523    KYN40317.1    AGBW02011015    OWR47365.1    KQ979657    KYN19937.1    KQ414807    KOC60585.1    GL451712    EFN78731.1    GFDF01009354    JAV04730.1    GAKP01017653    GAKP01017650    JAC41302.1    JRES01000558    KNC30220.1    JRES01000005    KNC34980.1    KY921797    ART29386.1    GL762106    EFZ22227.1    UFQS01002658    UFQT01002658    SSX14473.1    SSX33879.1    NEVH01006738    PNF36665.1    PNF36651.1    KQ982782    KYQ50731.1    KQ981993    KYN31122.1    KQ978426    KYM94033.1    ADTU01027569    ADTU01027570    ADTU01027571    KK107020    QOIP01000006    EZA62579.1    RLU21141.1    GL888679    EGI58548.1    KZ288191    PBC34473.1    PNF36655.1    KQ976730    KYM76403.1    KK118705    KFM73640.1    PNF36659.1    PNF36660.1    GFDG01002440    JAV16359.1    PNF36656.1    KY921795    ART29384.1    GFDG01002441    JAV16358.1    PNF36653.1    KMZ01252.1    CH480826    EDW44520.1    GEZM01024123    JAV87953.1    GEZM01024124    JAV87952.1    KK852470    KDR23205.1    EDW95573.1    KRK02523.1    KRK02524.1    KRK02525.1    KRK02528.1    KRK02529.1    KRK02526.1    LBMM01010620    KMQ87352.1   

Proteomes

UP000053268    UP000283053    UP000007151    UP000053240    UP000218220    UP000053097    + More
UP000192221    UP000007801    UP000000311    UP000008711    UP000000803    UP000000304    UP000001292    UP000002282    UP000001819    UP000268350    UP000008744    UP000095300    UP000242457    UP000053105    UP000092553    UP000192223    UP000007798    UP000075809    UP000092445    UP000005205    UP000092444    UP000092460    UP000078200    UP000002358    UP000092461    UP000091820    UP000078540    UP000215335    UP000095301    UP000005203    UP000007755    UP000078542    UP000078541    UP000078492    UP000053825    UP000008237    UP000037069    UP000235965    UP000279307    UP000054359    UP000027135    UP000036403   

PRIDE

Q9VVM0    B5RJ28    Q7KUR6    Q8MT96   

Pfam

PF13520   AA_permease_2        + More
PF13906   AA_permease_C

Interpro

IPR002293   AA/rel_permease1        + More
IPR029485   CAT_C       

ProteinModelPortal

A0A194Q2V8   A0A2H1VGY1   A0A3S2LWI7   A0A212F2R6   A0A2W1BMF0   A0A194QL91   + More
A0A2A4IXY9   A0A026W9I0   A0A1Y1KAP6   A0A1W4VSA6   B3M3U7   W8BRZ7   W8C1T2   E2AUA5   B3NDC1   A0A0Q5U4X9   Q9VVM0   B5RJ28   Q7KUR6   A0A0A1WH76   A0A0J9RXJ3   B4QPB9   A0A0J9RXE5   B4HLB6   A0A0K8VXE3   Q8MT96   A0A0R1DY18   A0A0K8VA69   B4PJH7   A0A0R3P519   Q2LZ14   A0A0R3P521   A0A3B0J4J8   A0A3B0JT08   B4GZR9   A0A1I8PFC7   A0A2A3EL75   A0A0M9A9K1   A0A0M3QWP9   A0A1W4XP81   B4N5H3   A0A151X255   A0A1A9ZS56   A0A158P296   A0A1B0FFA4   A0A1B0BPC9   A0A1A9UQJ3   K7J057   A0A1B0GHL5   A0A1A9WFH8   A0A151I0Y9   A0A232FBF3   A0A1I8MIN5   A0A0C9Q5K6   A0A1I8MIN2   A0A1I8MIN0   A0A087ZW64   F4W6J1   A0A195D310   A0A195FJ79   A0A212F0U3   A0A195E4W0   A0A0L7QPM2   E2C035   A0A1L8DEE8   A0A034VGR9   A0A0L0CD82   A0A0L0CRI8   A0A1Y0AWI8   E9IB29   A0A1I8PZF6   A0A336LCN3   A0A2J7R746   A0A2J7R739   A0A151WSG4   A0A195ET83   A0A151I7E1   A0A158NVX0   A0A026X573   F4X4X5   A0A2A3ERP8   A0A2J7R736   A0A151HYS8   A0A1I8MEN9   A0A087U8F1   A0A2J7R752   A0A2J7R757   A0A1L8ECN8   A0A2J7R774   A0A1Y0AWR5   A0A1L8EC89   A0A2J7R744   A0A0J9S020   B4IB57   A0A1Y1MQL8   A0A1Y1MQM0   A0A067RRF9   B4PJ49   A0A0R1E182   A0A0J7KAN6  

PDB

5OQT     E-value=1.08793e-58,     Score=574

KEGG

101735503    K13864 solute carrier family 7 (cationic amino acid transporter), member 2 | (RefSeq) cationic amino

GO

GO:0022857   GO:0016021   GO:0015171   GO:0003333   GO:0040008   GO:0055088   GO:0015174   GO:0016020   GO:0006508   GO:0003676   GO:0042555   GO:0006260   GO:0004672   GO:0048384   GO:0055085  

Length:

428

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

218.01898

Exp number, first 60 AAs:

20.71004

Total prob of N-in:

0.98527

POSSIBLE N-term signal

sequence

inside

1  -  38

TMhelix

39  -  61

outside

62  -  70

TMhelix

71  -  93

inside

94  -  104

TMhelix

105  -  127

outside

128  -  172

TMhelix

173  -  190

inside

191  -  194

TMhelix

195  -  217

outside

218  -  243

TMhelix

244  -  266

inside

267  -  286

TMhelix

287  -  309

outside

310  -  337

TMhelix

338  -  360

inside

361  -  380

TMhelix

381  -  400

outside

401  -  404

TMhelix

405  -  427

inside

428  -  428

 

 

Pi

230.271573

Theta

155.99531

Tajima's D

2.789869

CLR

0.585402

CSRT

0.965601719914004

Interpretation

Uncertain