Silkworm Genome Informatics Database

Gene

KWMTBOMO04251

Pre Gene Modal

BGIBMGA014240

Annotation

PREDICTED:_cationic_amino_acid_transporter_2-like_[Bombyx_mori]

Location

Bomo_Chr8(-):1045497-1061135 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 3.848

CDS

ATGGCTGGTGGGAAGTGGACGTTTTGCGACGTCGTGCGCCGGCGGAAGATTATACAGCCTCATCAGCTTGAAGCTGGAAATTTGAAAAGATGCCTGAGTCTTTGGGACGTGACAGCCCTTGGGGTGGGCAGTACTCTCGGAGCTGGTGTCTACGTCATTATCGGTTATGCAGCCTTCAAGTACGCAGGACCTTCAATTGTGCTCTCGTTCCTGATAGCTGGAGTTGCGGCTTTATTTTCAGGTTTGTGTTACGCTGAATTTGGAGCCAGAGTACCAAGAGCTGGTTCAGCATATGTTTACAGCTACGTGGCCATCGGGGAGGTGGTGGCTTTCTTTATTGGTTGGTGCAATATTCTTGAAGCAGCGATGGGCGCAGCGAGCTTGGCCCGCGGTCTCAGCATGTACGTGGACGGGATGTGCAACAATTCAATATTAGAATGGGCAACAGCTACAATGCCGATCTCTTCCTCATTCTTGTCACCGTACTTTGATCTGCTGGCGTTTGCATTTGTTCTTGTCATTGGAGTACTGCTATCAGTGGGTGGTCGAGAGTCGTCCGCCGTGAACATCGCGTTTGTCTTGCTGAACTTGTTAGTGATTATACTTGTTGTCATCGTTGGAGCTATCAATGCTGATTCAGCTAACTGGAGTATCCCATCCACGGACGTTCCGCAAGGTAGTGGCTCTGGAGGATTCTTCCCATACGGCGTATGGGGCACACTGAAGGGCGCTGCGATTTGCTTTTATGGTTTTGTTGGATTCGATACCATTAACGCTGCGGCCGAAGAGGTTCGAAAACCTCAAGAAACCATTCCAATGGTAATATTGATAGTTCTGCTTACTGCATTTGTTTGTTATTGCGGAATTTCTATTGTTTTGACAATGATGGTGCCATACTATCTGCAGAACTCCACCGATGCTGTTGGGTCAGCGTTCATTTTCATCGGATGGGAGTGGATGAAGTGGGTGGTATTTGTTGGTGCCTTCGCTGGGATCCTTGCCAGTTTATTTGGGGCCTTGTTGCCTCTCCCGCGGCTGTTGTACGCGATGTCCTCAGACGGCTTATTGGTCAGTTGGTTTTCGAAGTTAACGTCGTCGCGCAAGTCTCCTGTTTTTGCCACGATTTCGTCAGCTGCTGTTGTTGCCATACTTGCTGGAATTTTGGAACTAGAACAACTCATACTGATGCTTTGTATTGGAACGCTGCTCTCTTACACCGTAGTGGCTGTCTGTGTGATCGTATTAAGGTTTCGTTCAGAATACGCTCCTCAATCGTCTCCAGGGTTCTTCAAGGAGGTATTCGGCTGTGGCTTCAGGCTCGCCACACGTAGCACCGCCAGGATCGTTTACGCAGTTTTGTTCCTCTTTATAAGCGTATGTGTCTCTATGGCACTTATCTTGGCTCACGTGGAGAGGCCTCTCATACCACTTCTGGTACTACACGTGCTGGCTTTGATGCTGGTCATTATTATGTCGCTTCAGCCTAAAGCGAAGGAGGAGGTAGCTTTTAAGACTCCTCTGGTGCCTCTGATTCCCTGTCTGAGCATATACGTGAACGTGCACTTGATGGCCCTCATCAAACTTCAGACTTGGATTAGAGTCCTGATTTGGCTTGCTATAGGTATACCAGTCTACTTATTAGGATTATGTTGTTTCAAGAAGAAAGACAAAGAAGAAAAGGATATAGTTATGCCACACTCAGATGAGAATGGGAAACCACTACCTGTACAAATAGTAGTAGAATCACCTACGCCGCCTGATAGTATTAATAGAATTGGTAGCCACGGGGACAATACTATACTGGAAGAGAACGAACAAAGTAGCGATCAAATACGTAATGTCAGAAATGAAACATTCAATATCGAGGAAATCAAACATCAAGTGATTATTGAGAATAATGAAGAAAAGGAAGCTAAAATAATAGACCTGTTAGATCAAGTCCTGCAAGCTGAAGAAGAAACATACGGAGAAGCTATCAGTCTGAAAGACCAAAATATAGAAGAAGCTCCTGATGTCAAAGAAGTTATCCACAGAAAATCACTAGGCGAGCTTTCTGACGCAGGGTCTGATGTATCATCAGGTAATCAAGTATTATCTAAATATGATGTAATAGCGCAGGTCCACAGAGAGGATCTGCCTAAGGTAACTGAAGAAGAAGAAGAAAAAAGAGATGATGACGATGATCTAGAACAAGAAACAGAACAACACGAGCAAATCACTGCTTTTAATGACAGTGAGACCAATTCAAGGACCGATGAATCTGGATATTCTGACACGTTAGATAGAAATCCTTTCAGTGAGTCTCTTGAAGAGAAAGAGGATAGGGATGAAGAAGAGGCTCCTAATATACCAGTGCCACCGCCATTAGATGAAAATTTTTTTAGAAGTCCAAATTTTAAGAAATCTTATACAATTTCATCGAGACCTTTAAAAAAAGAAATGTCCGAAGAAGCAGAAGAGATTCCAAGACAAAGCGTTCAGTCGAATAACTCTCATAGCGATGACAATATTACGTTTGGTAGTGATAGACAAAAACATTTCATGAGTAAGCTAAACGATATATTTCAAAACAAGATAACGAATAACCAGGATGATGATGATGAAGAACCAAGAAAAAGATCACAGTCGACTGGAAATGCACCTGAAGACAACACTTTCACCGTAAGTCGTCCGTCTATATTCCTAGATTTGAAAAAGGAGATTGTCTCTCGTGAAGTGGCTCAGAATTTGCGACCTGTCAATCCAGACGAGACGAAAACCGAAGAAGAATCAACAGAAGAAGACAAACAATTGACAAGAGCAGATTTAAAATCTAAGTTAGAAAATATATTCGCTGCGGGCGGCCCTCAACTATTAAAACCTAGGCTGATGAAATCTAATCCTCCTACACCTGAAGAAGCATATCAAACTGATACATCGAGCACAGAAAGTATTGCCAAATTAGCGAAGCTGGACAAAAATGATACTTTAAAACGTCAAAAAGCTAAGTTCGGTGAAGTATTGAATTCCTTTAGGCTCAGTTTTAACAAAGACGATGCAGTTTGA

Protein

MAGGKWTFCDVVRRRKIIQPHQLEAGNLKRCLSLWDVTALGVGSTLGAGVYVIIGYAAFKYAGPSIVLSFLIAGVAALFSGLCYAEFGARVPRAGSAYVYSYVAIGEVVAFFIGWCNILEAAMGAASLARGLSMYVDGMCNNSILEWATATMPISSSFLSPYFDLLAFAFVLVIGVLLSVGGRESSAVNIAFVLLNLLVIILVVIVGAINADSANWSIPSTDVPQGSGSGGFFPYGVWGTLKGAAICFYGFVGFDTINAAAEEVRKPQETIPMVILIVLLTAFVCYCGISIVLTMMVPYYLQNSTDAVGSAFIFIGWEWMKWVVFVGAFAGILASLFGALLPLPRLLYAMSSDGLLVSWFSKLTSSRKSPVFATISSAAVVAILAGILELEQLILMLCIGTLLSYTVVAVCVIVLRFRSEYAPQSSPGFFKEVFGCGFRLATRSTARIVYAVLFLFISVCVSMALILAHVERPLIPLLVLHVLALMLVIIMSLQPKAKEEVAFKTPLVPLIPCLSIYVNVHLMALIKLQTWIRVLIWLAIGIPVYLLGLCCFKKKDKEEKDIVMPHSDENGKPLPVQIVVESPTPPDSINRIGSHGDNTILEENEQSSDQIRNVRNETFNIEEIKHQVIIENNEEKEAKIIDLLDQVLQAEEETYGEAISLKDQNIEEAPDVKEVIHRKSLGELSDAGSDVSSGNQVLSKYDVIAQVHREDLPKVTEEEEEKRDDDDDLEQETEQHEQITAFNDSETNSRTDESGYSDTLDRNPFSESLEEKEDRDEEEAPNIPVPPPLDENFFRSPNFKKSYTISSRPLKKEMSEEAEEIPRQSVQSNNSHSDDNITFGSDRQKHFMSKLNDIFQNKITNNQDDDDEEPRKRSQSTGNAPEDNTFTVSRPSIFLDLKKEIVSREVAQNLRPVNPDETKTEEESTEEDKQLTRADLKSKLENIFAAGGPQLLKPRLMKSNPPTPEEAYQTDTSSTESIAKLAKLDKNDTLKRQKAKFGEVLNSFRLSFNKDDAV

Uniprot

H9JXH4 A0A2W1BGG2 A0A2H1VBM6 A0A212FGT9 A0A194Q1A0

Pubmed

19121390 28756777 22118469 26354079

EMBL

BABH01032749 BABH01032750 BABH01032751 KZ150080 PZC73888.1 ODYU01001674 + More
SOQ38225.1 AGBW02008598 OWR52944.1 KQ459580 KPI99331.1

Proteomes

UP000005204 UP000007151 UP000053268

PRIDE

H9JXH4

Pfam

PF13906 AA_permease_C + More
PF13520 AA_permease_2

Interpro

IPR029485 CAT_C + More
IPR002293 AA/rel_permease1

ProteinModelPortal

H9JXH4 A0A2W1BGG2 A0A2H1VBM6 A0A212FGT9 A0A194Q1A0

PDB

6F34 E-value=2.16474e-56, Score=558

KEGG

101738249 K13864 solute carrier family 7 (cationic amino acid transporter), member 2 | (RefSeq) cationic amino

GO

GO:0016021 GO:0022857 GO:0015171 GO:0016020 GO:0008270 GO:0006384 GO:0042555 GO:0006260 GO:0004672 GO:0048384 GO:0055085

Length:

1014

Number of predicted TMHs:

14

Exp number of AAs in TMHs:

306.57073

Exp number, first 60 AAs:

22.24583

Total prob of N-in:

0.87347

POSSIBLE N-term signal

sequence

inside

1 - 36

TMhelix

37 - 59

outside

60 - 62

TMhelix

63 - 85

inside

86 - 96

TMhelix

97 - 119

outside

120 - 157

TMhelix

158 - 180

inside

181 - 186

TMhelix

187 - 209

outside

210 - 231

TMhelix

232 - 254

inside

255 - 274

TMhelix

275 - 297

outside

298 - 321

TMhelix

322 - 344

inside

345 - 368

TMhelix

369 - 388

outside

389 - 392

TMhelix

393 - 415

inside

416 - 447

TMhelix

448 - 470

outside

471 - 473

TMhelix

474 - 493

inside

494 - 505

TMhelix

506 - 525

outside

526 - 529

TMhelix

530 - 552

inside

553 - 1014

Pi

236.286151

Theta

179.950848

Tajima's D

0.653784

CLR

0.531381

CSRT

0.567121643917804

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics