SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04245
Annotation
PREDICTED:_uncharacterized_protein_LOC101746896_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.931
 

Sequence

CDS
ATGGCTTCAAAAGTGCTCGTGCCCACATCGCCGTTTTCGAAATTGCAACTCAAGAAGACTCCTCCTGAAGGCGGCGGCTTCGTGATCAGCAATGACGCGGCGGCCAGGGTGGCTCACCTCGAGCACAGCGTCAGGTTCCTCCAGGAGCAGCACCGGTCGATGCTGAGCGGCCTCCACGCTGAAATCGAGGCGCTCAGGGAAAGAAACAGAGATTTACAATTCCAATTGATCTTCAACAAGGAGTCTTCGAAGGCCAGCTCCCCTACCACGATGCCTGAGCCGCCGCGTAATAATGAGCAATCGAGTTTAAAGGCATTGGTACTTCGTCTGGAACACGAAGTGGCAGCTGCCAAGGAAGAAGCGCGTGCTGCGGAGGCTAAAGCAGCTCAGCTACAGAAGTTGGTCGATACAGAAACCGAAAAACTTCGTGAATTCGAAGCGGAGAGTAGAAAGTGCAAGTGTTCCCAAGCGGTGGGGAACGAGGAGACGGGCGCGGAGCTGCGCGCTCGGCTGGCGGAGGCGGAGCGGCTCGTGCGGAGACTGCGCGCCGACGCCGAGCGCCAGCGACGAGAGCTGCATTGCATGAAGAACTCTCTGCAGGCCAGCATCCGAGTAAGCGGTCTGGAGCCAGGCTTCGGTTACCAGAACAACTATCACTTCCCTCCTGTGCACAATCCTGAGTTCTGGAGGGAACCGATGAGAGAAGACTTCAATTTGATTGGTGCTCGCGGCAGAAGCACCCGACGACCTCTGACGTTACCAGAGTTGTCTGGGCAGGGAATACATCGCTCCACCGTCTATGCCAATAATCATACACGGCCGAGAGCGAATGGCTACGAACAGAAGAGCAAGAAGACACAACCGAACGCCGAGAACATCTCCCCCAGAACTCCCGAAGAGACAGAATGCCGTTTAAATACAACCGAATGTCTCCCGAAAATCGGTGATTGTAATAAAGATGTTAACGCGAAACATCCGCAATTGAAAATTGTTGTCTCGAAATACATACCCCACGGAAACGTGAACACGGATCAGCCCGAGTCGAAGTCTCGCGGCCGTCGACCGAATCATCGCAAGCATGGCGCCGACCACACGTAA
Protein
MASKVLVPTSPFSKLQLKKTPPEGGGFVISNDAAARVAHLEHSVRFLQEQHRSMLSGLHAEIEALRERNRDLQFQLIFNKESSKASSPTTMPEPPRNNEQSSLKALVLRLEHEVAAAKEEARAAEAKAAQLQKLVDTETEKLREFEAESRKCKCSQAVGNEETGAELRARLAEAERLVRRLRADAERQRRELHCMKNSLQASIRVSGLEPGFGYQNNYHFPPVHNPEFWREPMREDFNLIGARGRSTRRPLTLPELSGQGIHRSTVYANNHTRPRANGYEQKSKKTQPNAENISPRTPEETECRLNTTECLPKIGDCNKDVNAKHPQLKIVVSKYIPHGNVNTDQPESKSRGRRPNHRKHGADHT

Summary

Pfam
PF14916   CCDC92
Interpro
IPR039496   CCDC92/74_CC_dom        + More
IPR040370   CCDC74A/CCDC74B/CCDC92       

Ontologies

GO

Topology

Length:
365
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00818
outside
1  -  365
 
 

Population Genetic Test Statistics

Pi
223.617231
Theta
22.163132
Tajima's D
1.475816
CLR
0.195
CSRT
0.790760461976901
Interpretation
Uncertain
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