SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04235
Pre Gene Modal
BGIBMGA014257
Annotation
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.927
 

Sequence

CDS
ATGCAGATACCAGCTGGACTCCTCGCAAAGAAGTATGGGGGAAAACCAATACTGCTGGTCGCATTGTTAGCAAATGGGTCACTTTGCGTGCTGTTGCCAACGGTCGCTAGTTTGGGAGGTTGGCCGATGATATGCCTCTGTCGAGTACTCATGGGCTTAACGCAAGCTTGCCTCTTTCCAGCCAGTCACACGCTCCTGGGAAGATGGTTACCAGCAAACGAACGTACTACCCTGGCTGGCGTTGTATACGGAGGAGCACAAATGGGTACAATCATAGCCATGCCGGTATCAGGAGTTTTGGCAGAAACTGCAATGGGCTGGAAGTTAATCTTTTATGCTACGGGAGGATCTATGTTTGTCACTGCTGGACTCTGGTTCTGGTTTTCGGCCAGCTCTCCCGAAGAACATCCAATGATGTCTGAAGAAGAGAAATATTATATTGAAATGGGGTTGAATATGAGTACGGCCTTTCACATGGGCAACCGCCCGACACCATGGAAAGAGATGCTTAAGACAGGGCCACTGTGGGCCATCACGGTCTCGCATATCGCCAACACCGTCGCTTTCGTGCTATTTTTCGTCGACTTGCCAACGTACTTGGAAATGGCCATGCAAATATCTCTGAAGAATAGTGCTCTGCTATCAGCGCTACCTTATTTCGGTATGTGGGTTGGCAGTATTGCCTCTTCAATTATTTGTGAGAAGATATACAACAGAGGTTTACTTTCCATCGGCGCCTGTAGGAAGATATTCAATTCTTTAGGATTATTCGGGACGGGTGCGGGATTAATTGTCTTAGCTTTTATGGGGCCAGAACACAAGAATATAGCTATCGCCACTGTAGTTGCATTACTTACTATGTGTGGTTGCACTTCTGCCGGCTTCATGGTAAATCACTTGGACCTGTCTCCACACTTTGCCGGCGTGATGCTCTCTATAACCAACTTCGCCGGTAGTATCGGCAGTATACTAACGCCGGTTGGCACTAGTCTTATATTACGTAATGATTCGTCGGACATCTCAAGTTGGCGCATCGTATTTCTAGCAACCTCGGCCATTTGCGTCACTGCCAACATCATTTACCTGATATTCGGCAGTGGCGAGAGGCAGCCCTGGGATCGTCCTGATTGGGGAAACAGAAATAAATCAGATGCAGAAGAAATACGTCCGGTGTTGACTATGAAACATTTAAATGTTGAAGAACAGGAGAAGACTGCAGAACCATAG
Protein
MQIPAGLLAKKYGGKPILLVALLANGSLCVLLPTVASLGGWPMICLCRVLMGLTQACLFPASHTLLGRWLPANERTTLAGVVYGGAQMGTIIAMPVSGVLAETAMGWKLIFYATGGSMFVTAGLWFWFSASSPEEHPMMSEEEKYYIEMGLNMSTAFHMGNRPTPWKEMLKTGPLWAITVSHIANTVAFVLFFVDLPTYLEMAMQISLKNSALLSALPYFGMWVGSIASSIICEKIYNRGLLSIGACRKIFNSLGLFGTGAGLIVLAFMGPEHKNIAIATVVALLTMCGCTSAGFMVNHLDLSPHFAGVMLSITNFAGSIGSILTPVGTSLILRNDSSDISSWRIVFLATSAICVTANIIYLIFGSGERQPWDRPDWGNRNKSDAEEIRPVLTMKHLNVEEQEKTAEP

Summary

EMBL
KZ150053    PZC74365.1    NWSH01000795    PCG74170.1    ODYU01005491    ODYU01008171    + More
SOQ46394.1    SOQ51552.1    KQ459585    KPI98331.1    AGBW02009834    OWR49785.1    JTDY01000396    KOB77376.1    RSAL01000225    RVE43975.1    KQ460470    KPJ14577.1    ODYU01005717    SOQ46839.1    KPI98324.1    KQ460211    KPJ16523.1    GANO01002583    JAB57288.1    CVRI01000061    CRL04181.1    KQ414668    KOC64623.1    UFQS01000292    UFQT01000292    SSX02540.1    SSX22914.1    UFQS01000360    UFQT01000360    SSX03128.1    SSX23494.1    AGBW02009333    OWR51071.1    GFDL01005653    JAV29392.1    GFDL01005671    JAV29374.1    GFDF01009281    JAV04803.1    DS231876    EDS41975.1    NEVH01019069    PNF23028.1    PNF23027.1    CH954179    KQS62108.1    CM000158    KRJ99964.1    EDW91571.1    GDHF01031536    JAI20778.1    EDV55140.2    NWSH01000802    PCG74112.1    PZC74363.1    KB631278    ERL84203.1    KZ288409    PBC26101.1    CH902619    KPU77220.1    APGK01017174    APGK01017175    APGK01017176    APGK01017177    KB739998    ENN81941.1    GFDF01009314    JAV04770.1    GBXI01004017    GBXI01002141    JAD10275.1    JAD12151.1    GFDL01005603    JAV29442.1    GFDL01005627    JAV29418.1    EDV38027.1    ODYU01000335    SOQ34909.1    AE013599    AFH07950.1    AFH07951.1    PCG74111.1    PZC74361.1    CH954177    KQS70911.1    CH940648    EDW61462.1    AY119060    AAF59171.3    AAM50920.1    CM002911    KMY92119.1    KMY92120.1    EDV59614.1    KRF79997.1    ABLF02016022    ABLF02016025    ABLF02016026    JXUM01072235    JXUM01072236    KQ562709    KXJ75293.1    CH477210    EAT47708.1    CH480816    EDW46839.1    KQS70912.1    CH982331    EDX15594.1    KMY94943.1    GGFL01002003    MBW66181.1    CH933808    KRG04447.1    BT001852    AAF57634.1    AAN71613.1    JRES01000264    KNC32870.1    BT021280    AAF57633.1    AAX33428.1    ODYU01000336    SOQ34910.1    KMY94944.1    EDW09103.1    ODYU01001711    SOQ38292.1    GBXI01012109    JAD02183.1    EDW48523.1    ADMH02000203    ETN67381.1    GGFM01006318    MBW27069.1    CM000157    KRJ98328.1    GBXI01009556    JAD04736.1    CP012524    ALC42739.1    CM000362    EDX06089.1    GGFJ01004982    MBW54123.1    EDW89255.1    GEDC01005745    JAS31553.1    AAAB01008984    EAA14814.5    NWSH01001263    PCG71945.1    KRJ98329.1    GGFJ01004823    MBW53964.1    GFDG01003272    JAV15527.1    CH916367    EDW01195.1    APCN01003380    GGFK01005927    MBW39248.1    KK853091    KDR11545.1    ATLV01014397    KE524970    KFB38667.1    GGFJ01005003    MBW54144.1    GEDC01005492    JAS31806.1   
Pfam
PF07690   MFS_1        + More
PF06470   SMC_hinge
PF02463   SMC_N
Interpro
IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR027417   P-loop_NTPase       
IPR010935   SMC_hinge       
IPR003395   RecF/RecN/SMC_N       
IPR041738   SMC4_ABC_euk       
IPR036277   SMC_hinge_sf       
SUPFAM
SSF103473   SSF103473        + More
SSF75553   SSF75553       
SSF52540   SSF52540       
PDB
6E9O     E-value=2.48428e-07,     Score=131

Ontologies

Topology

Length:
408
Number of predicted TMHs:
10
Exp number of AAs in TMHs:
210.17675
Exp number, first 60 AAs:
31.40731
Total prob of N-in:
0.73078
POSSIBLE N-term signal
sequence
inside
1  -  16
TMhelix
17  -  39
outside
40  -  48
TMhelix
49  -  71
inside
72  -  77
TMhelix
78  -  100
outside
101  -  109
TMhelix
110  -  129
inside
130  -  173
TMhelix
174  -  196
outside
197  -  210
TMhelix
211  -  233
inside
234  -  253
TMhelix
254  -  271
outside
272  -  275
TMhelix
276  -  298
inside
299  -  310
TMhelix
311  -  333
outside
334  -  342
TMhelix
343  -  365
inside
366  -  408
 
 

Population Genetic Test Statistics

Pi
257.166392
Theta
171.040101
Tajima's D
0.754875
CLR
0.629943
CSRT
0.591220438978051
Interpretation
Uncertain
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