SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04230
Pre Gene Modal
BGIBMGA014242
Annotation
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 4.963
 

Sequence

CDS
ATGTCTGTCAAGGAAGTTAGCAATGACATTAAAAAACCCGATGCAATCTTGGGTATTCGGCATCTTCAAACTGCAATGTTATTCCTGGCAATGGTGTTGGCATATGGAATGCGAGTCAACATTAGCATGGCCATCGTTGCTATGACCGACAAGGACAACGAGGATTCCTTCAATTGGAGCATGCAAACCCAAAGCGTGATCCTCTCCTCGTTCTTTTGGGGCTACGTGGTGCTGCAGATACCTGGTGGAGAACTGGCAGCTAAATTCGGAGGAAAAATCCTGGTCATCATTTCACTTGGTGTCAATTCTGTTGTTTCCATGCTCATACCGTTAGCAGCTTATTATGGTGGATGGCAGGCGGTGTGTGCTTGCCGTGTACTCCAAGGCTTATCCCAAGGATTCACGTACCCATCCATTCACAACCTTATCGGGAAATGGGTTCCTCTAGAAGAGAAAAGCAGATTGGGCACCATTATTTACGCTGGTGGTCAACTTGGAACGGCTCTTCAACTTATGGCATCTGGTTTCATAGCCCAGTACTGGGGCTGGCCGGCAATATTTTACGTCAACGGTGCTTTAGGTGCCATCTGGACAGCATTCTACGTGTTCCTGGGCTCAGCTTCCCCTCAAACTAGCGGAATGATCAGTGAAGAGGAAAAAATTTATATACAGACTTCTTTGGGACAAGTTGGGGAACCAAAGAAATTCAAGACGCCTTGGCTGACAATATTTACGTCAGTCCCCTTCCTGTCGCTGGCTATCGTGCATTGTTGCCAAGCGTGGGGCTTTTGGACTCTGATGACGGAGATGCCGTCGTACTTGAAGCAAGTTCTCGGAGTCGATATTAAAGCGAATGGCGTCATGTCGGCTTTACCTTACCTTGCTATGTACCTGTTGAGTTTTCCATTTGGTTTTCTCTCAGATTACGTACTGAAGAAGGAGTTGATCAGCATCACCGCTACGAGGAAATTTAATAATTCAGTCGGATTATTTGGACCGGCGATAGCTCTAATTGGCTTGTCATATTCACCGGCTGGTAACGTCACGATGGCCGTTCTAATTCTCACAGTGGTGGTTGGGTTGAATGCTGGGCATCTAACAGGCTTTATGTTGGTGCACATTGACATGGCTCCCAACTTCGCTGGCACATTGATGGGCATCACCAACTGTGTTGCCAATATTGTATCGATAATTGCGCCCTTAGCCGCTGGAGCAGTACTGAAAGACGAAACGGACGCTAATGAGTGGCGTAAAGTGTTCTATATGGCTTCCGCATTGTACATCGTCGGCAACCTGCTGTTTATTTTCTTCGGGACCAGCGAGAGACAGAAATGGAACGATGTCGATGAAAATGAGTCAAAGGATACGACTTCAGAGCAGAGAATAGAAAAAGTTGTATAA
Protein
MSVKEVSNDIKKPDAILGIRHLQTAMLFLAMVLAYGMRVNISMAIVAMTDKDNEDSFNWSMQTQSVILSSFFWGYVVLQIPGGELAAKFGGKILVIISLGVNSVVSMLIPLAAYYGGWQAVCACRVLQGLSQGFTYPSIHNLIGKWVPLEEKSRLGTIIYAGGQLGTALQLMASGFIAQYWGWPAIFYVNGALGAIWTAFYVFLGSASPQTSGMISEEEKIYIQTSLGQVGEPKKFKTPWLTIFTSVPFLSLAIVHCCQAWGFWTLMTEMPSYLKQVLGVDIKANGVMSALPYLAMYLLSFPFGFLSDYVLKKELISITATRKFNNSVGLFGPAIALIGLSYSPAGNVTMAVLILTVVVGLNAGHLTGFMLVHIDMAPNFAGTLMGITNCVANIVSIIAPLAAGAVLKDETDANEWRKVFYMASALYIVGNLLFIFFGTSERQKWNDVDENESKDTTSEQRIEKVV

Summary

EMBL
BABH01032696    KQ459585    KPI98326.1    NWSH01001263    PCG71945.1    KZ150053    + More
PZC74373.1    BABH01032693    PCG71944.1    ODYU01002771    SOQ40673.1    ODYU01004887    SOQ45220.1    ODYU01000336    SOQ34910.1    AGBW02007960    OWR54368.1    JTDY01006556    KOB65894.1    KQ460211    KPJ16520.1    ODYU01000335    SOQ34909.1    KPI98325.1    KPJ16522.1    PZC74374.1    ODYU01001711    SOQ38292.1    BABH01032689    BABH01032690    JTDY01004737    KOB67817.1    PCG71946.1    PZC74363.1    JTDY01003667    KOB69179.1    KPJ16521.1    PZC74377.1    PZC74375.1    PCG71947.1    NWSH01000802    PCG74111.1    GFDF01009316    JAV04768.1    DS231876    EDS41975.1    JXUM01072235    JXUM01072236    KQ562709    KXJ75293.1    CH477210    EAT47708.1    APCN01003380    AAAB01008984    KA650153    AFP64782.1    KPI98324.1    GFDL01005653    JAV29392.1    GFDL01005671    JAV29374.1    JXJN01017217    ATLV01014397    KE524970    KFB38667.1    NEVH01019069    PNF23027.1    CCAG010020356    EZ424035    ADD20311.1    JRES01000264    KNC32870.1    UFQS01000292    UFQT01000292    SSX02540.1    SSX22914.1    UFQS01000360    UFQT01000360    SSX03128.1    SSX23494.1    PCG74112.1    PZC74361.1    GAPW01001428    JAC12170.1    JTDY01003347    KOB69692.1    PNF23028.1    GGFK01005927    MBW39248.1    AXCN02000794    GGFK01006136    MBW39457.1    ODYU01008929    SOQ52935.1    KK853091    KDR11545.1    GGFL01002003    MBW66181.1    AXCM01007649    GGFJ01004684    MBW53825.1    ADMH02000203    ETN67381.1    GGFJ01004982    MBW54123.1    GGFJ01005003    MBW54144.1    GGFJ01004983    MBW54124.1    GGFJ01004823    MBW53964.1    GDHF01001900    JAI50414.1    GDHF01033016    GDHF01031912    GDHF01024350    JAI19298.1    JAI20402.1    JAI27964.1    GAMC01006695    JAB99860.1    GAMC01006696    GAMC01006694    JAB99859.1    GBXI01012109    JAD02183.1    GBXI01009556    JAD04736.1    KPJ16523.1    ODYU01006429    SOQ48265.1    GAKP01013839    JAC45113.1    CH940648    EDW61462.1    CM002911    KMY94944.1    KRF79997.1    CH982331    EDX15594.1    KMY94943.1    CH963846    KRF97576.1    CH479181    EDW31644.1    CM000071    KRT01647.1   
Pfam
PF07690   MFS_1
Interpro
IPR011701   MFS        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR027378   Nucleotide_channel_N       
IPR005829   Sugar_transporter_CS       
SUPFAM
SSF103473   SSF103473       
Gene 3D
PDB
6E9O     E-value=1.91491e-18,     Score=228

Ontologies

Topology

Length:
466
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
234.97503
Exp number, first 60 AAs:
23.27371
Total prob of N-in:
0.22719
POSSIBLE N-term signal
sequence
outside
1  -  23
TMhelix
24  -  46
inside
47  -  65
TMhelix
66  -  83
outside
84  -  92
TMhelix
93  -  115
inside
116  -  154
TMhelix
155  -  177
outside
178  -  181
TMhelix
182  -  204
inside
205  -  242
TMhelix
243  -  265
outside
266  -  288
TMhelix
289  -  311
inside
312  -  323
TMhelix
324  -  346
outside
347  -  349
TMhelix
350  -  372
inside
373  -  383
TMhelix
384  -  406
outside
407  -  418
TMhelix
419  -  438
inside
439  -  466
 
 

Population Genetic Test Statistics

Pi
210.687944
Theta
19.828525
Tajima's D
0.561966
CLR
0.175407
CSRT
0.534823258837058
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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