SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04226
Pre Gene Modal
BGIBMGA014246
Annotation
PREDICTED:_putative_inorganic_phosphate_cotransporter_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 4.98
 

Sequence

CDS
ATGGGTGTTGCTACAAATGCGTTGGAAATAAGACCCAAAGGCCTAGGCATCCGTCATGTCCAGACTATACTACTTTTCCTGGCGATGCTGGTGGCGTTCATGATGAGGGTCAACATAAGCATGGCCATCGTAGACATGACTGATGAGAGGAAAGACGAGTATTTCGACTGGAGCCACAGTGTGCAGTCCGTGGTCTTGTCCTCATTTTTCTGGGGCTACGTGATACTTCAGGTGCCAGCTGGTGAACTAGCGAGAAAGTTCGGCGGAAAACCATTAATCACCATCTCCGTGTCTGTTAATGCGTTGATCTCATTGCTCCTGCCGACTGCCGCTAAAATTGGTGATTGGAAACTGGTGTGCGTCTGCCGAATCCTCCAAGGCTTCACGCAGGCATTCGTGTACCCTTGTATGCACCATCTCGTCAGCCAGTGGGTACCTCTGGAAGAGAAAGGATTGCTCACCACCATTGTCTACGCCGGTGGCCAATTAGGTATAGCGATCCAACTGATAATATCCGGGTTTATAGCCACAGACTGGGGCTGGCAGGCCATATTCTATACGAACGGAACCCTTGGGGCAATTTGGACTGTAGTCTACTTGATATTCGGCTCAGATTCCCCTGAGACATCCAAATACATTTCGAAAGAGGAAGTCAAATATATACAGGTCTCTCTGGGACGTGTTGGCGAGCAAAAGATATATCCTGCACCATGGCTTAAGATCATGACTTCCTTGCCGTTCTGGGCAGTGATAGTTGCACATTGCGGTCAGAACTGGGGATTCTTCACTCTGATGACGGAAATGCCAACATACATGTCTAAAGTCCTCAACGTGAATCTTAAAAATAACGGCGTTTTGTCTTCATTGCCGTATTTATCCATGTATATCCTGAGTTTCCCCATGGGCTACATGACCGACGTGATTATAAGGAACAAGTGGTTGAACGTGTCCAATACGAGGAAACTCTTTAATACTATAGGTCATTGGGGTCCAGCTATAGCGCTCATTGGCTTATCATACGCGCCGGCCGGAGACACAGTACTGGCTGTCGTGATGTTAACAGTGGCAGTCGGTATCAATGCTGGGCAGTACACCGGATACTTGCTAGTACACATCGATTTGGCTCCAAATTTCAGCGCATCACTAATGGGCATCACCAACTTCTTGGCCAATATTATTTCGATCATCGCTCCTTTGGTTTGCGGCTTCATCGTTAACGACGAGACCCAACCATCGGAATGGCGTAAAGTATTCTTCGTGGCTTCAGGAGTATACTTCTTCGGGAACCTGTTCTTTATATTGTTTTGTACCTCAAAAAGGCAACCTTGGAATGAACCAAAGGAGTCTGATATTGAATCGAAGGAACCAGAAAACAAGGCAGCTGAAAGGCAAACAGACACAAATTATATTTGA
Protein
MGVATNALEIRPKGLGIRHVQTILLFLAMLVAFMMRVNISMAIVDMTDERKDEYFDWSHSVQSVVLSSFFWGYVILQVPAGELARKFGGKPLITISVSVNALISLLLPTAAKIGDWKLVCVCRILQGFTQAFVYPCMHHLVSQWVPLEEKGLLTTIVYAGGQLGIAIQLIISGFIATDWGWQAIFYTNGTLGAIWTVVYLIFGSDSPETSKYISKEEVKYIQVSLGRVGEQKIYPAPWLKIMTSLPFWAVIVAHCGQNWGFFTLMTEMPTYMSKVLNVNLKNNGVLSSLPYLSMYILSFPMGYMTDVIIRNKWLNVSNTRKLFNTIGHWGPAIALIGLSYAPAGDTVLAVVMLTVAVGINAGQYTGYLLVHIDLAPNFSASLMGITNFLANIISIIAPLVCGFIVNDETQPSEWRKVFFVASGVYFFGNLFFILFCTSKRQPWNEPKESDIESKEPENKAAERQTDTNYI

Summary

EMBL
BABH01032689    BABH01032690    ODYU01001711    SOQ38292.1    KZ150053    PZC74363.1    + More
KQ460211    KPJ16521.1    KQ459585    KPI98325.1    AGBW02007960    OWR54368.1    NWSH01000802    PCG74111.1    KPJ16522.1    JTDY01003347    KOB69692.1    BABH01032693    PZC74373.1    NWSH01001263    PCG71945.1    ODYU01000336    SOQ34910.1    KPI98326.1    ODYU01002771    SOQ40673.1    ODYU01004887    SOQ45220.1    BABH01032696    PCG71944.1    ODYU01000335    SOQ34909.1    PZC74374.1    KPJ16520.1    PCG71946.1    PZC74377.1    JTDY01003667    KOB69179.1    PCG74112.1    PZC74375.1    KK853091    KDR11545.1    NEVH01019069    PNF23027.1    PNF23028.1    PZC74361.1    CH477210    EAT47708.1    JRES01000264    KNC32870.1    PCG71947.1    AAAB01008984    ODYU01006429    SOQ48265.1    GFDF01009314    JAV04770.1    KPI98324.1    GANO01002583    JAB57288.1    JXUM01072235    JXUM01072236    KQ562709    KXJ75293.1    KA650153    AFP64782.1    GDHF01001900    JAI50414.1    GDHF01033016    GDHF01031912    GDHF01024350    JAI19298.1    JAI20402.1    JAI27964.1    APCN01003380    EZ424035    ADD20311.1    CCAG010020356    DS231876    EDS41975.1    GGFJ01004823    MBW53964.1    GGFJ01004983    MBW54124.1    GGFJ01004982    MBW54123.1    JXJN01017217    GGFK01005927    MBW39248.1    GGFK01006136    MBW39457.1    GGFL01002003    MBW66181.1    GAMC01006696    GAMC01006694    JAB99859.1    GAMC01006695    JAB99860.1    GGFJ01004684    MBW53825.1    AGBW02009333    OWR51071.1    GAKP01013839    JAC45113.1    ADMH02000203    ETN67381.1    UFQS01000360    UFQT01000360    SSX03128.1    SSX23494.1    GGFJ01005003    MBW54144.1    UFQS01000292    UFQT01000292    SSX02540.1    SSX22914.1    KPJ16523.1    JRES01000105    KNC34073.1    AXCM01007649    AXCN02000794    GFDL01005653    JAV29392.1    GFDL01005671    JAV29374.1    GBXI01004017    GBXI01002141    JAD10275.1    JAD12151.1    GFDF01009316    JAV04768.1    ATLV01014397    KE524970    KFB38667.1    GBXI01012109    JAD02183.1    GBXI01009556    JAD04736.1    GDHF01031536    JAI20778.1    JTDY01004737    KOB67817.1    GAPW01001428    JAC12170.1   
Pfam
PF07690   MFS_1
Interpro
IPR020846   MFS_dom        + More
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR027378   Nucleotide_channel_N       
IPR005829   Sugar_transporter_CS       
SUPFAM
SSF103473   SSF103473       
Gene 3D
PDB
6E9O     E-value=1.10155e-07,     Score=135

Ontologies

Topology

Length:
470
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
235.44062
Exp number, first 60 AAs:
24.22043
Total prob of N-in:
0.40034
POSSIBLE N-term signal
sequence
inside
1  -  20
TMhelix
21  -  43
outside
44  -  57
TMhelix
58  -  80
inside
81  -  91
TMhelix
92  -  111
outside
112  -  153
TMhelix
154  -  176
inside
177  -  182
TMhelix
183  -  202
outside
203  -  244
TMhelix
245  -  262
inside
263  -  282
TMhelix
283  -  305
outside
306  -  324
TMhelix
325  -  342
inside
343  -  346
TMhelix
347  -  369
outside
370  -  383
TMhelix
384  -  406
inside
407  -  417
TMhelix
418  -  435
outside
436  -  470
 
 

Population Genetic Test Statistics

Pi
285.17576
Theta
193.048575
Tajima's D
1.333781
CLR
0.003603
CSRT
0.742912854357282
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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