Silkworm Genome Informatics Database

Gene

KWMTBOMO04220

Pre Gene Modal

BGIBMGA004760

Annotation

PREDICTED:_uncharacterized_protein_LOC105842707_[Bombyx_mori]

Location

Bomo_Chr8(+):69826-71414 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.224

CDS

ATGAGGAAGGATATCAAGAACTTCCTGGAGGTTCAGTCGGATAGGGGCCAGCGTGTCCTCTACGAGCTCAGCAAGCGGATGACGCGTTTAGAAGCAGCAAGAAAACCACTGTCACCCACAGCTTCGACTTCACCAGAATATGAAGATCACATTCTGGAACGCCTGGGTCAAGTGGAAATAAACCTGCAGACGCGGCTAAACGACCTGGAAGCCAAAATGACCTCATCCTTCGAAGAACAAAATGTTCTCCGCGACGACGGCGGCGCTGACATCATCGACAAAATTATCGACAGAGTCGACGAGGTCGGAGGGGCCATTGACAAAACCGCCGAGAGCGTCAGAGTCATGGTCTGCTCCCAGAACACCGTCGGCGACAAGCTCGATCATATTGCCGCTGATGTCGCGTCAGCAAAAACTGCAATCGACATAGTCGCTCAAGGTGTGGTCACAGGCGAGCAAAGACCTATCTCCAGGTCGTATGCCAACGTCGCGGCCACCAAGTCAGGGCATCGGCCGGCACTACACTCGATGGCGGTCACCCTCGAAGGCAATCAGGAGACTGCCGACGAGGTGCTTGAGAGAGTGAGGAAGGCGGTCGATGCCAGGGGTACTGGCCTGAAAATAAGCAAGGTGCGCAAAGCAAAAAATCAAACAGTTATTTTAGGGTGTGACACCGAAGCGGAACTATACAAGGTGAAAGAAACGATTGAAAGCCGGGGGAAGGGTTTAATTGTTTCCCGCATGAAAAATAAAAACCCGCTTGTCATCCTAAAAGATGTCTTCCTCCCGAGTGACGACGAGGAGATAATTAAAGCGCTTCATATTCAGAACGAGGATATATTTAGGGACTTGTCTCAGGAAGATAAAGAAACGACCATAAAGTTCAAGAAGAGGACAAAAAATCCCAAAACGGCGCACGTCATTGTCCAGGTTGGTCCCGTGGTATGGCAAAGGATGACGGAGGCTGGGGCCCTCTACCTGGACCTGCAAAGGATCAGAGTCGAGGACCAGTCTCCGCTCATCCAATGCACTAGGTGCCTCGCATTTGGACATGGTCGAAAATTTTGCACCGAGAGTGTGGACAGATGCAGTCACTGTGGAGGACCGCATCTGCGCGAGAAATGCGCAGACTTCATCGCAGGGACCGAACCGCAGTGCTGCAACTGCTCACACTCTGGGTTGCGGAAGGCCGACCATAACGCTTTTAGCGCCGAATGCCCGCACAAGAACACTTACATGAACCACAAACAGTAA

Protein

MRKDIKNFLEVQSDRGQRVLYELSKRMTRLEAARKPLSPTASTSPEYEDHILERLGQVEINLQTRLNDLEAKMTSSFEEQNVLRDDGGADIIDKIIDRVDEVGGAIDKTAESVRVMVCSQNTVGDKLDHIAADVASAKTAIDIVAQGVVTGEQRPISRSYANVAATKSGHRPALHSMAVTLEGNQETADEVLERVRKAVDARGTGLKISKVRKAKNQTVILGCDTEAELYKVKETIESRGKGLIVSRMKNKNPLVILKDVFLPSDDEEIIKALHIQNEDIFRDLSQEDKETTIKFKKRTKNPKTAHVIVQVGPVVWQRMTEAGALYLDLQRIRVEDQSPLIQCTRCLAFGHGRKFCTESVDRCSHCGGPHLREKCADFIAGTEPQCCNCSHSGLRKADHNAFSAECPHKNTYMNHKQ

Uniprot

H9JG79 A0A2P8ZKU7 A0A0J7NQR3 A0A132A2M4 A0A132AHA1

Pubmed

19121390 29403074 26555130

EMBL

BABH01002157 PYGN01000027 PSN57126.1 LBMM01002461 KMQ94800.1 JXLN01010145 + More
KPM05191.1 JXLN01014890 KPM10307.1

Proteomes

UP000005204 UP000245037 UP000036403

PRIDE

H9JG79

Pfam

PF00098 zf-CCHC

Interpro

IPR001878 Znf_CCHC + More
IPR036875 Znf_CCHC_sf

SUPFAM

SSF57756 SSF57756

ProteinModelPortal

H9JG79 A0A2P8ZKU7 A0A0J7NQR3 A0A132A2M4 A0A132AHA1

KEGG

105841662 no KO assigned | (RefSeq) uncharacterized LOC105841662

GO

GO:0003676 GO:0008270

Length:

417

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0016

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01957

outside

1 - 417

Pi

234.519397

Theta

161.189141

Tajima's D

2.892309

CLR

0.206608

CSRT

0.974301284935753

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree