Silkworm Genome Informatics Database

Gene

KWMTBOMO04217

Pre Gene Modal

BGIBMGA014468

Annotation

TRAS3_[Danaus_plexippus]

Location

Bomo_Chr7(-):13915211-13920269 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.868

CDS

ATGGCACCCGTAATCCCTGAAATAACATTACCCGCGTCTGCAGAGGACATAAACAGTAGGGACACATACCTCGAAACCGTCCGTAAGCTCATATCCTGCATCACAACAGCTGTGACTGAGGGAAAAAGTGTTACCGCAGCCAACAAGCGCCTTATCTGCTCCGCGGCGGAGGAAATTCGTAGGGCGACGAGAGTGTTGGAAACAACACTCGCATCGACACTGACACCACCAACCCCCTCTCCACCTGCCACCAACGAAGGTTTGAAGGAGGAGATTATCGCTTGCGTCAGAGAGGAGTTCAAGCGGCATAGACAACTACCGCCGCTGACCCTTCAATCACAAGTTCGCCCATCGTATGCCCAAGCCGCAGCACCCAACCCCCGGAAACCAGCCCTTACGACCAAACCAACACCCAAAACATATCCAGCTACAAAACCTGCAATTATTGTCTCAGCAAAAACCGAAGTAAAGACGAAACAGGATATTATCGAGGCCTGGAGGCGCAACATCAGCTTCAAAAATTCCGGCTTTGCCCCTAGCAGAGTACAAGCTGTATCAAATAACAAACTAAGAATCGAGTTCGATAACATAGAACAAAGGAACGATACCCTCACTCGTATCACTAACTCCCAGACAATTCACGCCGAACCCGCTCGCAGGCTGCTGCCTATGCTCAATCTCAAGGGAGTCTCCAAAGACGTTCCCGCTGAAGATCTAGTGAGCATAATCAGCAGACAGAACCCGGAACTCACTAACGCAATCAACCAAAAGGAGGACTTGCGGTTCCGTTTCCAGCGCTCCAACAGAAACCCCAACTTATATAACGCCATCCTAATTGCACAGCCAACTGTCTGGCGTAAGTGTATAAGCCTGGGCAGAATCAGTGTGGACCATCAACGTATTCACGTAGAGGAGTTCACACCGTTCCTGCAGTGTCACAAGTGCCTTAGCTTCGGCCACACTAAAAACAAGTGTTCGTCCACCGAACAATACTGTGCACACTGCAAATCGATTATGGCACCGATTAACTCCGTGAAATTCCTACAGTGCAATGTGGATAAGTCAAAAAACAGTTGGCACGAATTTCTAGTCTCCTTCACCAGCGAACGATATCATTTTGCCCTAATATCCGAACCTTACGTAGGCGCAAATAACGAGGTCAAAAACATCCCCGGAATTAACATTTACCAATTCTCTGACGGCGCGCGTGTCAAGGCCTGCATACTAGCTAAGACAGGTGTCGGCTCAGTCCTCGGCCTATCCCAATACTCTTCGGCAAACCTGTCGGTCATACAGCTAACGGCAGGAAACAAGAAGACGTACATAGCCTCAACGTACATCGAACCCGATGTCGATGCCAACGGCACCATGGAGCGTCTGGAAGTTTTCCTTAAAGACATAGGAGGGGCAAGAGTAATTGTGGGAGGTGACTTCAATGGATGGCACCCATCGTGGGGGAGCGTGAGGGTGAACCCCAGAGGCTCATCACTAGTCGAACTAGCGCACAGCAACGATTTATACATTTGTAACTCAGGAGACACTCCAACCTTCGAAACCATCACTCATGGCCGCAATAGATCATCCATCATCGACCTTACTCTTGCATCCAGCGACCTCTTCAACAGCATCTCTGAATGGCACGTAAATCTTAACACATGCCCCACCTCCCAACACAACGCCATTGAATTCTCACTTAACACCAACGAAAACACAAATAAACACGCAGAAAACACTTCCACATTCCTATACAAGTCGGAACAAGCCAATTGGACAATATTTAGAAACACCCTCCACACTCTTATGGCCAACACAGACATCCTTGATAGGAGCGTTGAAAGCTTAAGCCCAGAGGGACTTGAGTCGCTCCTTCGGGAAGTCACGGACATCCTACACCGGGCCTGTAGGGCATCGATGCGAGTAAAAGCAGGCTCTGGGAATAGACACAAGCCGCCTTGGCTCACTGGGAAAACTGAATTCCTCCCCAATGACATTTCTTATGAGAAACCTGTCCCCGTCAAGGACCTCCTACATCCCGCTAGAAGGCCGACAATCAAACCCATACCCTCCTCTGAACACCGAATTAACTCCGAAATGACGGACAGTACTCTGGTCACTCGCGTATTCACTGACGGAAGTAAGCAGGACGATGGATCAGTTGGAGCCGCATTCGTGCTTTACAGACCCGGCGACACTGAAACATCCGTAACAAAAAAGTACAAATTACACAGTAGCTGCACAGTCTTCCAGGCAGAGCTGTACGCCATTTGGAAAGCCTGTCAGTGGATTGTAAGCGAAAATCATCCCCACACATACATCTTCACCGATTCTCTCTCATCAATATACGCGATAAATAACAGAAGCAACACACACCCCATCATAGTGAACATACACAAACTCATACACGCTAACCACACTACACACAAAATTTTCATAGACTGGGTAAAGGGACACTCGGGTATCATAGGAAACGAGGAAGCCGATGCGGCTGCCAACAGCGGCGCACGCATGCACAAGGCCCCCGACTACTCGCAGTTCTCAATATCCTACGTGAAACACAAGATTCACACAGAACACCACGCCATCTGGCAAGCCAGATACGAAAGCTCCCCGCAGGGCTCACACACAAAAACACTACTACCAAAACTGAACGACATCAAAGAACTCAACAAATGCACACAAACAAACTTTCAGCTTACACAAATACTCACAGGCCATGGATATCACAAGACATACTTACATCGCTTCAAAATAGCACCAGATGACACCTGCCCCTGCGACGGCACTTCCAGCCAAACTGTAGAACACCTCCTTAAAAACTGCCAAGTGTTCGCTGCGAAAAGGCACAGCCACGAAGAAACGTGCCACGAAGTACAGGTGTCACCATATAATTTACCTGAAATGTTAAAAAAGAAAGCTGCAATCAACTCTTTCACTTCGTTTTGCCAAACAATAATCAACAACATCAAGAAAATAAATGAAAACAATTAG

Protein

MAPVIPEITLPASAEDINSRDTYLETVRKLISCITTAVTEGKSVTAANKRLICSAAEEIRRATRVLETTLASTLTPPTPSPPATNEGLKEEIIACVREEFKRHRQLPPLTLQSQVRPSYAQAAAPNPRKPALTTKPTPKTYPATKPAIIVSAKTEVKTKQDIIEAWRRNISFKNSGFAPSRVQAVSNNKLRIEFDNIEQRNDTLTRITNSQTIHAEPARRLLPMLNLKGVSKDVPAEDLVSIISRQNPELTNAINQKEDLRFRFQRSNRNPNLYNAILIAQPTVWRKCISLGRISVDHQRIHVEEFTPFLQCHKCLSFGHTKNKCSSTEQYCAHCKSIMAPINSVKFLQCNVDKSKNSWHEFLVSFTSERYHFALISEPYVGANNEVKNIPGINIYQFSDGARVKACILAKTGVGSVLGLSQYSSANLSVIQLTAGNKKTYIASTYIEPDVDANGTMERLEVFLKDIGGARVIVGGDFNGWHPSWGSVRVNPRGSSLVELAHSNDLYICNSGDTPTFETITHGRNRSSIIDLTLASSDLFNSISEWHVNLNTCPTSQHNAIEFSLNTNENTNKHAENTSTFLYKSEQANWTIFRNTLHTLMANTDILDRSVESLSPEGLESLLREVTDILHRACRASMRVKAGSGNRHKPPWLTGKTEFLPNDISYEKPVPVKDLLHPARRPTIKPIPSSEHRINSEMTDSTLVTRVFTDGSKQDDGSVGAAFVLYRPGDTETSVTKKYKLHSSCTVFQAELYAIWKACQWIVSENHPHTYIFTDSLSSIYAINNRSNTHPIIVNIHKLIHANHTTHKIFIDWVKGHSGIIGNEEADAAANSGARMHKAPDYSQFSISYVKHKIHTEHHAIWQARYESSPQGSHTKTLLPKLNDIKELNKCTQTNFQLTQILTGHGYHKTYLHRFKIAPDDTCPCDGTSSQTVEHLLKNCQVFAAKRHSHEETCHEVQVSPYNLPEMLKKKAAINSFTSFCQTIINNIKKINENN

Uniprot

NA

ProteinModelPortal

NA

PDB

1WDU E-value=1.46956e-23, Score=275

KEGG

NA

GO

GO:0003676 GO:0004523 GO:0016043 GO:0006384 GO:0016021 GO:0042555 GO:0006260 GO:0004672 GO:0048384

Length:

995

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00314

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1 - 995

Pi

246.889384

Theta

169.355526

Tajima's D

1.990581

CLR

0.025947

CSRT

0.88035598220089

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree