Gene

KWMTBOMO04201

Pre Gene Modal

BGIBMGA008648

Annotation

PREDICTED:_dystrophin?_isoform_B-like_[Bombyx_mori]

Location

Bomo_Chr7(-):13360093-13375354      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.061

CDS

ATGGAGGAACCACAAGGTTGGCTCTCGCACTGCGACAAGCGCGTACGAGCCTTCACCAACTCTCTTGACGAGCTCGCCAGCAGAGTCCAAGCTGCTGAAGCGGCCAGGTCTTCATGGCGAGGACCAGGCGACGCAAGAGACGCTCGGGCACAACTGGATGCTGTCTCCAGAGCCAGAGCTCAACTGCCACCACTCAGGAGATTGGCTGATGAGCTACACGCTCAAGCACAGACACTAGCGAGAGACAAAATCCAGCTACCAGATCAATTACTGGCGAAACTTGATGACTTAAATACAAGAGTCGGTGCTCTCTGCGCTGGTGGGGAGGAACGGGCCCGTCAGCTGGCAGGCGTGGCCCGCGACGGTGGGGCCGGCGCTGCCCAGGGATTCCTCGCTGGTTCCGTGGACCCACCGTGGGAGCGAGCCGTCACGCCAGCCAACGTACCTTATTATATTAACCATGAGTTAGAGACAACGCACTGGGACCACCCCAAGATGATTGAACTAATGAACTCCTTAGCCGACCTCAACGAGGTTCGGTTCTCGGCCTACAGGACCGCTCTCAAGCTACGGACGGTGCAGAAAGCTCTGTGCATGCACATGCTGCAGCTCCCGGCCGCGCTCGAGGCTTTCGACTCGCACGGTCTACGCGCGCAAAACGACAGACTCATCGACATTCCCGACATGATCACCGTCCTCACCACTCTGTACGAAGTGATTGCGGCGGAGAACCCAAGCGCCGTGAACGTGCCGCTGTGTCTGGACCTCTCCATGAACTGGCTGCTGAACGTGTACGACAGCCAGCGCACCGGACAGATCAGGGTGTTGAGCTTCAAAGTCGGCTTGGTGTTGCTCTGTAAAGGACATCTGGAGGAAAAGTATAGGTATTTATTCCGGTTAATCGCCGACCCATCATGCAGGGCAGACCAAAGGAAGCTGGGTCTCTTGCTGCACGATTGTATTCAGGTGCCGAGACAGTTGGGCGAGGTTGCAGCTTTCGGCGGCTCCAATATCGAACCCTCAGTCCGGAGTTGCTTCGAGCAGGCCTCCACTGCTGCCAAGGAGGGCAGCAAAGGAGGAACTCTTGACAGGAAAACTGAAAAAGAAAAGGATGAAACGAAAGAGAAGCCAGTCGAGCGAGACGCGGACGGCCAGGTCCAGTACATCGAAGCGTTCCAGTTCCTGCAGTGGCTGCAGCGCGAGCCGCAGTCCATGGTGTGGCTGCCCGTGCTGCACCGCCTGGCCGCCGCCGAGGGGGCCCGCCACCAAGCCAAGTGCAACATCTGCAAGGACTATCCTATCGTTGGGTTCAGGTACCGCTGCCTCAAGTGCTTCAACTTCGACATGTGTCAAAAGTGCTTCTTCAACGGCCGGAAGGCCAAGAACCACAAATTGACGCATCCGATGCAGGAGTACTGCACTGCGACGACGTCGGGAGAGGACGTGCGCGACTTCACGAGGGCGCTCCGCAACAAGTTCAAGTCGGCGCGCTACTTCAAGAAGCACCCCAGGGTCGGGTACTTGCCTGTACAAACCGTTTTAGAAGGTGATGCTCTGGAGTCCCCCGCTCCCTCTCCGCAGCACGGCGCGTCCCTCGGCCCCGACATGCACTCGCGCCTCGAGCTGTACGCCACCCGCCTCGCGCAGGTCGAGCTCAGCGCCGCCGACACTCCCGACAGCGATGAAGAACATCAGCTCATAGCTCAGTACTGCGCCTCACTGAACGGCGGAGGGGAGTCCGAAGAAGCTCCTCGCTCGCCTGTGCAAGTGGTCTCCATTATCCACCGCGAGCAGAGACACGAACTCGAGGCCATGATTAGGGAACTGGAAGAAGAAAACGCAAGTCTCCAAGCGGAGTACGAGCGTCTGAAGGCTAAGCAGACTCCAGGCTCCACGCCCGAGGAGCAGCAGCACGGCGTCAGCGACAATAGCCGCAGCGGACCGGTAGACCAGGACATGATGGCCGAGGCTCGTCTTCTCCGTCAGCACAAGGGCCGGCTGGAGGCTCGCATGCACATTCTGGAGGAACACAACAGACAACTCGAAGCTCAGCTGCAGCGTCTACGCACCTTACTCGACGAGCCGGCCCAGGGCTCGCCCCCAGCGCGCACCGGAACATTACAGACACGTTCGGTGACCGCTTCGCAGCTTGCAACTGATTCACCAGCCAAAATGCACAATGGACTCTACCACGAGTCACAAACAAATGGCGGCGCTCGTTGGGCTGGCGCCGAGCGGCCCCCCCCGCCCCCGCACACCGTGCACTCCCTCATGCACTGCGCAGATGACTTGGGCCGTGCCGTAGAAGAGCTCGTCTCGGTGATGTCCGAGGACTCCGGCACGCCGAGCAACGCGCCACCGCAGTACACGAACGGGAAACCGGCAAACAACGAATGA

Protein

MEEPQGWLSHCDKRVRAFTNSLDELASRVQAAEAARSSWRGPGDARDARAQLDAVSRARAQLPPLRRLADELHAQAQTLARDKIQLPDQLLAKLDDLNTRVGALCAGGEERARQLAGVARDGGAGAAQGFLAGSVDPPWERAVTPANVPYYINHELETTHWDHPKMIELMNSLADLNEVRFSAYRTALKLRTVQKALCMHMLQLPAALEAFDSHGLRAQNDRLIDIPDMITVLTTLYEVIAAENPSAVNVPLCLDLSMNWLLNVYDSQRTGQIRVLSFKVGLVLLCKGHLEEKYRYLFRLIADPSCRADQRKLGLLLHDCIQVPRQLGEVAAFGGSNIEPSVRSCFEQASTAAKEGSKGGTLDRKTEKEKDETKEKPVERDADGQVQYIEAFQFLQWLQREPQSMVWLPVLHRLAAAEGARHQAKCNICKDYPIVGFRYRCLKCFNFDMCQKCFFNGRKAKNHKLTHPMQEYCTATTSGEDVRDFTRALRNKFKSARYFKKHPRVGYLPVQTVLEGDALESPAPSPQHGASLGPDMHSRLELYATRLAQVELSAADTPDSDEEHQLIAQYCASLNGGGESEEAPRSPVQVVSIIHREQRHELEAMIRELEEENASLQAEYERLKAKQTPGSTPEEQQHGVSDNSRSGPVDQDMMAEARLLRQHKGRLEARMHILEEHNRQLEAQLQRLRTLLDEPAQGSPPARTGTLQTRSVTASQLATDSPAKMHNGLYHESQTNGGARWAGAERPPPPPHTVHSLMHCADDLGRAVEELVSVMSEDSGTPSNAPPQYTNGKPANNE

Uniprot

A0A2H1VIY5   A0A2W1BY66   A0A1E1WUH3   A0A212ER20   A0A1E1W3G0   A0A194PX88   + More
A0A195D7N4   A0A195EYG8   A0A151X450   A0A158NE51   E9J516   A0A2J7PV58   A0A154PH74   A0A0L7R870   A0A195BR01   F4W825   A0A310SEN3   A0A195CLI0   A0A088AJ46   E2B8D5   A0A026WH37   V9ICT2   A0A2A3EC27   A0A2J7PV18   A0A0C9RVM7   A0A2J7PV24   A0A0C9RBW3   A0A0C9QUT0   A0A2A4JAJ2   A0A2A3EDD6   A0A0C9RFK4   A0A0N0BDW7   A0A232FMZ6   A0A1B6HWQ9   A0A1B6DAH2   A0A1Q3FU53   A0A1B6HGJ5   A0A3L8DXZ2   A0A1B6FA46   B0X0E8   A0A0P6IXE5   A0A067RB92   A0A023EUZ7   A0A0A9YLR0   A0A0A9Z766   E0VJZ9   Q175I9   A0A0A9ZD78   A0A0A9ZD72   A0A069DY06   A0A224X947   A0A023F0P7   A0A0K8T9F1   W4VR82   A0A0K8T9F7   A0A336MTP1   A0A0K8T9D3   A0A1L8E5U7   W8B6P5   W8AXC5   W8AC76   W8AIH3   A0A1I8MJ19   A0A0K8W373   T1PM18   A0A0A1WU22   A0A034V0N6   A0A0A1WQW4   A0A0A9Z770   A0A1I8PLW7   A0A0A1X3X5   A0A0A1XNJ6   A0A3B0JNE1   A0A034V2T5   A0A0A9Z5J2   A0A1J1HVV4   A0A0A9Z5J6   A0A0A9Z3C7   T1P855   A0A0K8VES8   A0A0A1WM29   A0A0A9Z8S5   A0A0A9Z8T0   W5JVQ4   A0A0L0CIP1   A0A0A9YSD3   A0A0R3NPN5   A0A0P8Y0C2   A0A1W4VX52   A0A0P8Y0C3   A0A0A9YQV7   A0A182JPI6   A0A0P9AS37   A0A0P8YN77   A0A0B4KGH0   A0A1W4VX22   A0A1W4W848   A0A0R3NKE7   A0A0R3NQL5   A0A0R3NR30  

Pubmed

28756777    22118469    26354079    21347285    21282665    21719571    + More
20798317    24508170    28648823    30249741    26999592    24845553    24945155    25401762    20566863    17510324    26334808    25474469    24495485    25315136    25830018    25348373    20920257    23761445    26108605    15632085    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

ODYU01002550    SOQ40204.1    KZ149948    PZC76713.1    GDQN01000371    JAT90683.1    + More
AGBW02013189    OWR43894.1    GDQN01009536    JAT81518.1    KQ459589    KPI97633.1    KQ981153    KYN08886.1    KQ981906    KYN33263.1    KQ982548    KYQ55193.1    ADTU01012837    ADTU01012838    ADTU01012839    ADTU01012840    ADTU01012841    ADTU01012842    ADTU01012843    ADTU01012844    ADTU01012845    ADTU01012846    GL768123    EFZ12083.1    NEVH01020989    PNF20190.1    KQ434899    KZC10824.1    KQ414637    KOC66951.1    KQ976424    KYM88389.1    GL887888    EGI69695.1    KQ760629    OAD59720.1    KQ977600    KYN01563.1    GL446312    EFN88034.1    KK107207    EZA55377.1    JR038061    AEY58099.1    KZ288290    PBC29240.1    PNF20188.1    GBYB01011751    JAG81518.1    PNF20189.1    GBYB01004391    JAG74158.1    GBYB01004392    JAG74159.1    NWSH01002258    PCG68786.1    PBC29239.1    GBYB01007170    JAG76937.1    KQ435851    KOX70714.1    NNAY01000019    OXU31890.1    GECU01028599    JAS79107.1    GEDC01014605    JAS22693.1    GFDL01003977    JAV31068.1    GECU01033967    JAS73739.1    QOIP01000002    RLU25330.1    GECZ01022734    JAS47035.1    DS232235    EDS38109.1    GDUN01000260    JAN95659.1    KK852759    KDR17040.1    GAPW01000323    JAC13275.1    GBHO01009597    JAG34007.1    GBHO01003853    JAG39751.1    DS235235    EEB13705.1    CH477400    EAT41731.1    GBHO01003849    JAG39755.1    GBHO01003854    JAG39750.1    GBGD01000006    JAC88883.1    GFTR01009002    JAW07424.1    GBBI01003645    JAC15067.1    GBRD01003657    JAG62164.1    GANO01003961    JAB55910.1    GBRD01003638    JAG62183.1    UFQT01002627    SSX33802.1    GBRD01003659    JAG62162.1    GFDF01000169    JAV13915.1    GAMC01021106    JAB85449.1    GAMC01021104    JAB85451.1    GAMC01021105    JAB85450.1    GAMC01021108    JAB85447.1    GDHF01006979    JAI45335.1    KA648958    AFP63587.1    GBXI01011718    JAD02574.1    GAKP01022136    JAC36816.1    GBXI01013241    JAD01051.1    GBHO01003848    JAG39756.1    GBXI01008510    JAD05782.1    GBXI01001765    JAD12527.1    OUUW01000008    SPP83747.1    GAKP01022138    JAC36814.1    GBHO01003850    JAG39754.1    CVRI01000024    CRK92192.1    GBHO01003845    JAG39759.1    GBHO01003847    JAG39757.1    KA644762    AFP59391.1    GDHF01014946    JAI37368.1    GBXI01014839    JAC99452.1    GBHO01003851    JAG39753.1    GBHO01003846    JAG39758.1    ADMH02000278    ETN67140.1    JRES01000342    KNC32077.1    GBHO01009596    JAG34008.1    CM000070    KRT01343.1    CH902617    KPU80241.1    KPU80239.1    GBHO01009598    JAG34006.1    KPU80240.1    KPU80243.1    AE014297    AGB96112.1    KRT01355.1    KRT01349.1    KRT01360.1   

Proteomes

UP000007151    UP000053268    UP000078492    UP000078541    UP000075809    UP000005205    + More
UP000235965    UP000076502    UP000053825    UP000078540    UP000007755    UP000078542    UP000005203    UP000008237    UP000053097    UP000242457    UP000218220    UP000053105    UP000215335    UP000279307    UP000002320    UP000027135    UP000009046    UP000008820    UP000095301    UP000095300    UP000268350    UP000183832    UP000000673    UP000037069    UP000001819    UP000007801    UP000192221    UP000075881    UP000000803   

Pfam

PF09069   EF-hand_3        + More
PF00569   ZZ
PF00397   WW
PF09068   EF-hand_2
PF00435   Spectrin
PF00361   Proton_antipo_M
PF00307   CH

Interpro

IPR000433   Znf_ZZ        + More
IPR036020   WW_dom_sf       
IPR001202   WW_dom       
IPR011992   EF-hand-dom_pair       
IPR015154   EF-hand_dom_typ2       
IPR018159   Spectrin/alpha-actinin       
IPR015153   EF-hand_dom_typ1       
IPR002017   Spectrin_repeat       
IPR001750   ND/Mrp_mem       
IPR035436   Dystrophin/utrophin       
IPR001589   Actinin_actin-bd_CS       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       

SUPFAM

SSF51045   SSF51045        + More
SSF47473   SSF47473       
SSF47576   SSF47576       

Gene 3D

1.10.418.10    

CDD

cd00201  WW
cd00014  CH

ProteinModelPortal

A0A2H1VIY5   A0A2W1BY66   A0A1E1WUH3   A0A212ER20   A0A1E1W3G0   A0A194PX88   + More
A0A195D7N4   A0A195EYG8   A0A151X450   A0A158NE51   E9J516   A0A2J7PV58   A0A154PH74   A0A0L7R870   A0A195BR01   F4W825   A0A310SEN3   A0A195CLI0   A0A088AJ46   E2B8D5   A0A026WH37   V9ICT2   A0A2A3EC27   A0A2J7PV18   A0A0C9RVM7   A0A2J7PV24   A0A0C9RBW3   A0A0C9QUT0   A0A2A4JAJ2   A0A2A3EDD6   A0A0C9RFK4   A0A0N0BDW7   A0A232FMZ6   A0A1B6HWQ9   A0A1B6DAH2   A0A1Q3FU53   A0A1B6HGJ5   A0A3L8DXZ2   A0A1B6FA46   B0X0E8   A0A0P6IXE5   A0A067RB92   A0A023EUZ7   A0A0A9YLR0   A0A0A9Z766   E0VJZ9   Q175I9   A0A0A9ZD78   A0A0A9ZD72   A0A069DY06   A0A224X947   A0A023F0P7   A0A0K8T9F1   W4VR82   A0A0K8T9F7   A0A336MTP1   A0A0K8T9D3   A0A1L8E5U7   W8B6P5   W8AXC5   W8AC76   W8AIH3   A0A1I8MJ19   A0A0K8W373   T1PM18   A0A0A1WU22   A0A034V0N6   A0A0A1WQW4   A0A0A9Z770   A0A1I8PLW7   A0A0A1X3X5   A0A0A1XNJ6   A0A3B0JNE1   A0A034V2T5   A0A0A9Z5J2   A0A1J1HVV4   A0A0A9Z5J6   A0A0A9Z3C7   T1P855   A0A0K8VES8   A0A0A1WM29   A0A0A9Z8S5   A0A0A9Z8T0   W5JVQ4   A0A0L0CIP1   A0A0A9YSD3   A0A0R3NPN5   A0A0P8Y0C2   A0A1W4VX52   A0A0P8Y0C3   A0A0A9YQV7   A0A182JPI6   A0A0P9AS37   A0A0P8YN77   A0A0B4KGH0   A0A1W4VX22   A0A1W4W848   A0A0R3NKE7   A0A0R3NQL5   A0A0R3NR30  

PDB

1EG4     E-value=1.64229e-90,     Score=852

KEGG

101738393    no KO assigned | (RefSeq) dystrophin, isoform B-like

GO

GO:0008270   GO:0046872   GO:0003779   GO:0005515   GO:0016043   GO:0006384   GO:0016021   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

Length:

798

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00019

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1  -  798

 

 

Pi

291.048819

Theta

182.960114

Tajima's D

1.620345

CLR

0.224071

CSRT

0.812959352032398

Interpretation

Uncertain