Gene

KWMTBOMO04200  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008650

Annotation

cyclin-dependent_kinase_regulatory_subunit_[Bombyx_mori]

Location

Bomo_Chr7(+):13353975-13356387      View in EpiBrowser

Full name

Cyclin-dependent kinases regulatory subunit      

Location in the cell

Mitochondrial   Reliability : 1.017 Nuclear   Reliability : 1.368

CDS

ATGCCCGTGGACCAGATTCAATATTCGGAAAGATATACAGATGACGTCTACGAATACAGGCATGTCATCTTACCACCGGATATAGCCCGCATGGTGCCAAAATCCCATCTTATGACAGAGACAGAGTGGCGAAACCTTGGTGTTCAGCAGAGTCCCGGCTGGCTCCACTTTATGGTGCATAATCCTGAACCCCATGTTCTATTATTTAGAAGACCTAGAACTGATATACCGGCTCCCTTGAATGGCTTAGATACAAATACTAGTTCTGCTGTGAAGTTGATTACGAAATTGGCTTGGCTGCAAACGCGAAACTAA

Protein

MPVDQIQYSERYTDDVYEYRHVILPPDIARMVPKSHLMTETEWRNLGVQQSPGWLHFMVHNPEPHVLLFRRPRTDIPAPLNGLDTNTSSAVKLITKLAWLQTRN

Description

Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.

Similarity

Belongs to the CKS family.

Uniprot

H9JGK3   Q2F6C0   A0A2A4J9M4   A0A0B4KK24   A0A212EQW5   S4PWJ6   + More
A0A2H1VH89   A0A0L7LTU2   A0A194PY07   A0A194RCY5   A0A034WTE9   A0A0A1X3B8   A0A0K8UI31   A0A023EEI9   Q17AP8   A0A232EJX9   A0A1Q3FDX1   A0A0L0C923   A0A3L8D691   A0A1A9WPT4   A0A067R430   A0A2J7QT56   K7IXS1   A0A1I8PJF2   A0A023EE40   A0A182WV61   Q7QFX2   A0A182I8T6   A0A1I8N8F9   A0A182NL45   B0WH04   A0A2A3E959   A0A088A8A9   A0A1A9Z868   A0A1A9XM48   A0A1B0BQB5   A0A182P789   W8BDG0   D3TPR3   A0A1A9VDG8   U5ETE0   A0A182R5W9   A0A2P8XWX3   D1FQ33   A0A310SHA7   A0A0K8TNY1   F4WWH9   A0A195FCT3   A0A0N1ITP1   A0A195BNF4   A0A158NKN9   B4JI00   A0A182F9H1   A0A2M4C526   B4K7J7   B4HL28   B4PTU2   B3P4U3   A0A1W4W2T5   Q9VHN1   B3LXG6   B4NB03   B4LZG5   A0A182XXE3   A0A3B0KCW2   Q294K5   B4GMZ3   A0A2M4CLT7   A0A1L8DKQ3   A0A336LNA2   J3JTS3   D0QWL8   A0A1B0DLP6   A0A1W4XWT4   A0A1Q3EXP6   A0A2B4REK6   D2A136   A0A1B0CJ40   E0VTD9   A0A3M6UVM4   A0A094ZG01   A0A183NZP3   A0A183JXZ4   A0A183MF79   A0A075AF98   Q5BSH4   C1LJY4   A0A183RDG0   G4VHW3  

Pubmed

19121390    28756777    22118469    23622113    26227816    26354079    + More
25348373    25830018    24945155    26483478    17510324    28648823    26108605    30249741    24845553    20075255    12364791    14747013    17210077    25315136    24495485    20353571    29403074    26369729    21719571    21347285    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25244985    15632085    22516182    23537049    19859648    18362917    19820115    20566863    30382153    22246508    16617374    22253936   

EMBL

BABH01039110    DQ311152    ABD36097.1    NWSH01002258    PCG68785.1    KC242802    + More
KZ149948    AGW00925.1    PZC76714.1    AGBW02013189    OWR43893.1    GAIX01006673    JAA85887.1    ODYU01002550    SOQ40203.1    JTDY01000101    KOB78862.1    KQ459589    KPI97634.1    KQ460367    KPJ15482.1    GAKP01001899    JAC57053.1    GBXI01009052    JAD05240.1    GDHF01031695    GDHF01025977    GDHF01010597    JAI20619.1    JAI26337.1    JAI41717.1    JXUM01007517    GAPW01006528    KQ560241    JAC07070.1    KXJ83642.1    CH477331    EAT43338.1    NNAY01003942    OXU18611.1    GFDL01009299    JAV25746.1    JRES01000752    KNC28755.1    QOIP01000013    RLU15358.1    KK852771    KDR16878.1    NEVH01011202    PNF31753.1    GAPW01006527    JAC07071.1    AAAB01008844    EAA06091.3    APCN01003117    DS231931    EDS27329.1    KZ288325    PBC28004.1    JXJN01018551    GAMC01009828    GAMC01009827    JAB96727.1    CCAG010012556    EZ423415    ADD19691.1    GANO01001963    JAB57908.1    PYGN01001224    PSN36510.1    EZ419933    ACZ28288.1    KQ766586    OAD53665.1    GDAI01001757    JAI15846.1    GL888406    EGI61521.1    KQ981693    KYN37854.1    KQ435768    KOX75224.1    KQ976439    KYM86731.1    ADTU01018942    CH916369    EDV92908.1    GGFJ01011281    MBW60422.1    CH933806    EDW15341.1    CH480815    EDW42992.1    CM000160    EDW96553.1    CH954181    EDV49887.1    AE014297    AY102666    AAF54272.1    AAM27495.1    CH902617    EDV42810.1    CH964232    EDW80967.1    CH940650    EDW68200.1    OUUW01000008    SPP84049.1    CM000070    EAL28963.1    CH479185    EDW38217.1    GGFL01002057    MBW66235.1    GFDF01007031    JAV07053.1    UFQS01000027    UFQT01000027    SSW97693.1    SSX18079.1    APGK01023056    BT126632    KB740462    AEE61595.1    ENN80606.1    FJ821033    ACN94717.1    AJVK01072439    GFDL01015067    JAV19978.1    LSMT01000669    PFX15239.1    KQ971338    EFA02600.1    AJWK01014019    DS235762    EEB16645.1    RCHS01000617    RMX57746.1    KL250514    KGB32722.1    UZAL01028320    VDP40292.1    UZAK01032399    VDP26912.1    UZAI01016813    VDP16471.1    KL596721    KER27504.1    AY915290    AAX30511.2    FN314628    FN319284    FN319285    CAX75012.1    HE601627    CCD79014.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000037510    UP000053268    UP000053240    + More
UP000069940    UP000249989    UP000008820    UP000215335    UP000037069    UP000279307    UP000091820    UP000027135    UP000235965    UP000002358    UP000095300    UP000076407    UP000007062    UP000075840    UP000095301    UP000075884    UP000002320    UP000242457    UP000005203    UP000092445    UP000092443    UP000092460    UP000075885    UP000092444    UP000078200    UP000075900    UP000245037    UP000007755    UP000078541    UP000053105    UP000078540    UP000005205    UP000001070    UP000069272    UP000009192    UP000001292    UP000002282    UP000008711    UP000192221    UP000000803    UP000007801    UP000007798    UP000008792    UP000076408    UP000268350    UP000001819    UP000008744    UP000019118    UP000092462    UP000192223    UP000225706    UP000007266    UP000092461    UP000009046    UP000275408    UP000050791    UP000050789    UP000050790    UP000277204    UP000050792    UP000008854   

PRIDE

H9JGK3    Q2F6C0    Q9VHN1   

Pfam

PF01111   CKS        + More
PF00147   Fibrinogen_C

Interpro

IPR036858   Cyclin-dep_kinase_reg-sub_sf        + More
IPR000789   Cyclin-dep_kinase_reg-sub       
IPR002181   Fibrinogen_a/b/g_C_dom       
IPR036056   Fibrinogen-like_C       

SUPFAM

SSF55637   SSF55637        + More
SSF56496   SSF56496       

Gene 3D

3.30.170.10    

CDD

cd00087  FReD

ProteinModelPortal

H9JGK3   Q2F6C0   A0A2A4J9M4   A0A0B4KK24   A0A212EQW5   S4PWJ6   + More
A0A2H1VH89   A0A0L7LTU2   A0A194PY07   A0A194RCY5   A0A034WTE9   A0A0A1X3B8   A0A0K8UI31   A0A023EEI9   Q17AP8   A0A232EJX9   A0A1Q3FDX1   A0A0L0C923   A0A3L8D691   A0A1A9WPT4   A0A067R430   A0A2J7QT56   K7IXS1   A0A1I8PJF2   A0A023EE40   A0A182WV61   Q7QFX2   A0A182I8T6   A0A1I8N8F9   A0A182NL45   B0WH04   A0A2A3E959   A0A088A8A9   A0A1A9Z868   A0A1A9XM48   A0A1B0BQB5   A0A182P789   W8BDG0   D3TPR3   A0A1A9VDG8   U5ETE0   A0A182R5W9   A0A2P8XWX3   D1FQ33   A0A310SHA7   A0A0K8TNY1   F4WWH9   A0A195FCT3   A0A0N1ITP1   A0A195BNF4   A0A158NKN9   B4JI00   A0A182F9H1   A0A2M4C526   B4K7J7   B4HL28   B4PTU2   B3P4U3   A0A1W4W2T5   Q9VHN1   B3LXG6   B4NB03   B4LZG5   A0A182XXE3   A0A3B0KCW2   Q294K5   B4GMZ3   A0A2M4CLT7   A0A1L8DKQ3   A0A336LNA2   J3JTS3   D0QWL8   A0A1B0DLP6   A0A1W4XWT4   A0A1Q3EXP6   A0A2B4REK6   D2A136   A0A1B0CJ40   E0VTD9   A0A3M6UVM4   A0A094ZG01   A0A183NZP3   A0A183JXZ4   A0A183MF79   A0A075AF98   Q5BSH4   C1LJY4   A0A183RDG0   G4VHW3  

PDB

4YC6     E-value=1.1861e-24,     Score=273

KEGG

101738123    K02219 cyclin-dependent kinase regulatory subunit CKS1 | (RefSeq) cyclin-dependent kinases regulator

GO

GO:0007049   GO:0051301   GO:0016538   GO:0016301   GO:0016021   GO:0043130   GO:0042393   GO:0061575   GO:0019005   GO:0007346   GO:0000307   GO:0019901   GO:0016740   GO:0007113   GO:0000278   GO:0016043   GO:0006384   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

Length:

104

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00216

Exp number, first 60 AAs:

0.00024

Total prob of N-in:

0.27846

outside

1  -  104

 

 

Pi

250.197479

Theta

205.772839

Tajima's D

0.664636

CLR

141.160753

CSRT

0.56277186140693

Interpretation

Uncertain