Gene

KWMTBOMO04190  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008730

Annotation

PREDICTED:_synapse-associated_protein_of_47_kDa_[Bombyx_mori]

Location

Bomo_Chr7(+):13176622-13181892      View in EpiBrowser

Full name

Synapse-associated protein of 47 kDa      

Location in the cell

Cytoplasmic   Reliability : 0.794

CDS

ATGCACATGCTCTGTGTAAAGTTTGCCATCCAAGCTCTATCGCAAATGAGCTTCCATTCCGATATAATGAGCATCTTGGGTGAATTCAATCGCGAGCAGGACGCCTTCATCAAAGGACAAGAGAAAGCCGGTGCTGGGTCGGCTATTGCTCCCTGGATCGGCGCTCCTAACGAAGCTGCTCTGAAGGAAGAATGCCTCTCCCTTTCCACTGATCGAAGGAACTTTGTCCGCGCTCCGCCGGCGGGCGTGGAGTTCGACTTCGATTACGACAAGATGTACCCGGTGGCGGTCGCAATTATGACCGAGGACCCGAACCTTGAGAAGATGCGCTTTGATCTTGTGCCAAAAGTTATCACTGAAGAGAACTTTTGGAGGAACTACTTCTACCGCCTGTCGCTGATCTGCCAGGCCAACGAGGCCGACGCCCTCGCGGCGCGCCATTCCTCCGCCGACGACTCCCAGGCTTAA

Protein

MHMLCVKFAIQALSQMSFHSDIMSILGEFNREQDAFIKGQEKAGAGSAIAPWIGAPNEAALKEECLSLSTDRRNFVRAPPAGVEFDFDYDKMYPVAVAIMTEDPNLEKMRFDLVPKVITEENFWRNYFYRLSLICQANEADALAARHSSADDSQA

Keywords

Alternative splicing   Complete proteome   Phosphoprotein   Reference proteome  

Feature

chain  Synapse-associated protein of 47 kDa
splice variant  In isoform F, isoform G and isoform I.

Uniprot

H9JGT3   A0A2H1VP24   A0A194PW87   A0A194RCB8   A0A3S2LSW5   A0A212F533   + More
A0A1E1W4Q7   S4PW91   A0A2W1B5S7   A0A2A4K4F3   A0A2A4K3V9   A0A2A4K4W3   A0A1W4XB29   A0A0A9W017   A0A0A9XNQ4   A0A0A9XMR6   A0A0A9XKK8   A0A0K8S9K3   A0A146LH73   A0A0A9XQZ0   A0A0A9XMS2   A0A0T6B916   A0A146LFW7   A0A1B6G6M2   D6W7Y3   A0A182PM84   A0A1B6C4T4   A0A1Y1K6Y0   A0A1Y1K415   A0A139WPJ7   A0A182W167   A0A182SDQ0   A0A182XG09   A0A1B6CA49   V5GV31   A0A1Y1K6U5   A0A1Y1K7P2   A0A1B6CPZ5   A0A1B6JJR0   A0A1B6HPM1   A0A1B6D2G3   A0A067QS14   A0A182FPG0   A0A1B6K2S3   A0A1B6K805   A0A1B6CJQ8   A0A182ID55   A0A182KCI5   A0A2J7PGZ2   A0A2R7VXW3   Q173T4   A0A182UQ59   F5HL82   E0VK05   N6T9F4   A0A182L6Z9   A0A1B6G4E8   A0A1B6FPQ6   A0A182H6G4   A0A182GTY3   Q173T6   A0A182XX30   A0A182JCR9   A0A084WP12   A0A1Q3FCF7   A0A2M4CIA0   A0A2M4CI67   Q173T5   A0A023EV36   A0A2M4BKY2   A0A2M4BKT4   A0A1B6LES7   A0A2M4AQQ6   A0A1B6LWB3   F5HL80   A0A069DS44   A0A0P4VTJ0   A0A2M4AMF0   A0A1B6KTM1   A0A1B6KKR3   A0A224XUK1   A0A182MKH8   A0A2S2QHD5   A0A1B6MHT8   A0A1B6KPY6   A0A0C9PU23   A0A0R1E7U0   Q960T2-4   A0A1B0BBV9   W5JGS8   A0A0K8WHY5   A0A1B6E6R5   T1P7T5   F3YDF6   A0A0R1E777   Q960T2-3   A0A0B4LH71   A0A1A9ZTC1   Q960T2-2   T1PK00  

Pubmed

19121390    26354079    22118469    23622113    28756777    25401762    + More
26823975    18362917    19820115    28004739    24845553    17510324    12364791    14747013    17210077    20566863    23537049    20966253    26483478    25244985    24438588    24945155    26334808    27129103    17994087    17550304    7494462    10731132    12537572    12537569    18327897    20920257    23761445    12537568    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01034414    BABH01034415    ODYU01003353    SOQ42004.1    KQ459589    KPI97641.1    + More
KQ460367    KPJ15488.1    RSAL01000271    RVE43165.1    AGBW02010265    OWR48851.1    GDQN01009193    JAT81861.1    GAIX01007198    JAA85362.1    KZ150304    PZC71519.1    NWSH01000158    PCG78949.1    PCG78947.1    PCG78948.1    GBHO01043811    GBRD01016398    JAF99792.1    JAG49428.1    GBHO01022338    JAG21266.1    GBHO01022345    JAG21259.1    GBHO01022342    GBRD01016395    JAG21262.1    JAG49431.1    GBRD01016396    JAG49430.1    GDHC01011750    JAQ06879.1    GBHO01022341    JAG21263.1    GBHO01022335    GBRD01015389    JAG21269.1    JAG50437.1    LJIG01009302    KRT83351.1    GDHC01011476    JAQ07153.1    GECZ01011681    JAS58088.1    KQ971307    EFA11027.1    GEDC01028777    JAS08521.1    GEZM01093619    JAV56218.1    GEZM01093617    JAV56219.1    KYB29817.1    GEDC01027168    JAS10130.1    GALX01002939    JAB65527.1    GEZM01093615    JAV56221.1    GEZM01093616    JAV56220.1    GEDC01021739    JAS15559.1    GECU01008291    JAS99415.1    GECU01031161    JAS76545.1    GEDC01017495    JAS19803.1    KK853022    KDR12364.1    GECU01013924    GECU01001934    JAS93782.1    JAT05773.1    GECU01023619    GECU01000393    JAS84087.1    JAT07314.1    GEDC01023733    JAS13565.1    APCN01005030    NEVH01025158    PNF15600.1    KK854149    PTY12179.1    CH477416    EAT41364.1    AAAB01008880    EGK97041.1    DS235235    EEB13711.1    APGK01039172    KB740967    KB632399    ENN76884.1    ERL94628.1    GECZ01026628    GECZ01015277    GECZ01013618    GECZ01012463    GECZ01006200    JAS43141.1    JAS54492.1    JAS56151.1    JAS57306.1    JAS63569.1    GECZ01017574    JAS52195.1    JXUM01027088    JXUM01027089    KQ560777    KXJ80933.1    JXUM01088159    JXUM01088160    JXUM01088161    JXUM01088162    JXUM01088163    KQ563684    KXJ73495.1    EAT41363.1    ATLV01024813    ATLV01024814    ATLV01024815    KE525361    KFB51956.1    GFDL01009781    JAV25264.1    GGFL01000855    MBW65033.1    GGFL01000856    MBW65034.1    EAT41365.1    GAPW01001254    JAC12344.1    GGFJ01004589    MBW53730.1    GGFJ01004539    MBW53680.1    GEBQ01017817    JAT22160.1    GGFK01009793    MBW43114.1    GEBQ01011995    JAT27982.1    EGK97043.1    GBGD01002036    JAC86853.1    GDKW01000018    JAI56577.1    GGFK01008630    MBW41951.1    GEBQ01025209    JAT14768.1    GEBQ01027944    JAT12033.1    GFTR01004326    JAW12100.1    AXCM01000384    GGMS01007962    MBY77165.1    GEBQ01004447    JAT35530.1    GEBQ01026490    JAT13487.1    GBYB01004833    JAG74600.1    CM000160    KRK03714.1    X80110    X80111    AE014297    AY051871    JXJN01011702    JXJN01011703    JXJN01011704    JXJN01011705    ADMH02001267    ETN63291.1    GDHF01003214    GDHF01001829    JAI49100.1    JAI50485.1    GEDC01003678    JAS33620.1    KA644597    AFP59226.1    BT126317    AEB41030.1    AGB95997.1    KRK03713.1    AHN57349.1    KA649091    AFP63720.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000283053    UP000007151    UP000218220    + More
UP000192223    UP000007266    UP000075885    UP000075920    UP000075901    UP000076407    UP000027135    UP000069272    UP000075840    UP000075881    UP000235965    UP000008820    UP000075903    UP000007062    UP000009046    UP000019118    UP000030742    UP000075882    UP000069940    UP000249989    UP000076408    UP000075880    UP000030765    UP000075883    UP000002282    UP000000803    UP000092460    UP000000673    UP000092445   

PRIDE

H9JGT3    Q960T2    F3YDF6   

Pfam

PF03909   BSD

Interpro

IPR035925   BSD_dom_sf        + More
IPR005607   BSD_dom       

Gene 3D

1.10.3970.10    

ProteinModelPortal

H9JGT3   A0A2H1VP24   A0A194PW87   A0A194RCB8   A0A3S2LSW5   A0A212F533   + More
A0A1E1W4Q7   S4PW91   A0A2W1B5S7   A0A2A4K4F3   A0A2A4K3V9   A0A2A4K4W3   A0A1W4XB29   A0A0A9W017   A0A0A9XNQ4   A0A0A9XMR6   A0A0A9XKK8   A0A0K8S9K3   A0A146LH73   A0A0A9XQZ0   A0A0A9XMS2   A0A0T6B916   A0A146LFW7   A0A1B6G6M2   D6W7Y3   A0A182PM84   A0A1B6C4T4   A0A1Y1K6Y0   A0A1Y1K415   A0A139WPJ7   A0A182W167   A0A182SDQ0   A0A182XG09   A0A1B6CA49   V5GV31   A0A1Y1K6U5   A0A1Y1K7P2   A0A1B6CPZ5   A0A1B6JJR0   A0A1B6HPM1   A0A1B6D2G3   A0A067QS14   A0A182FPG0   A0A1B6K2S3   A0A1B6K805   A0A1B6CJQ8   A0A182ID55   A0A182KCI5   A0A2J7PGZ2   A0A2R7VXW3   Q173T4   A0A182UQ59   F5HL82   E0VK05   N6T9F4   A0A182L6Z9   A0A1B6G4E8   A0A1B6FPQ6   A0A182H6G4   A0A182GTY3   Q173T6   A0A182XX30   A0A182JCR9   A0A084WP12   A0A1Q3FCF7   A0A2M4CIA0   A0A2M4CI67   Q173T5   A0A023EV36   A0A2M4BKY2   A0A2M4BKT4   A0A1B6LES7   A0A2M4AQQ6   A0A1B6LWB3   F5HL80   A0A069DS44   A0A0P4VTJ0   A0A2M4AMF0   A0A1B6KTM1   A0A1B6KKR3   A0A224XUK1   A0A182MKH8   A0A2S2QHD5   A0A1B6MHT8   A0A1B6KPY6   A0A0C9PU23   A0A0R1E7U0   Q960T2-4   A0A1B0BBV9   W5JGS8   A0A0K8WHY5   A0A1B6E6R5   T1P7T5   F3YDF6   A0A0R1E777   Q960T2-3   A0A0B4LH71   A0A1A9ZTC1   Q960T2-2   T1PK00  

PDB

1X3A     E-value=1.19472e-25,     Score=283

KEGG

101736843    no KO assigned | (RefSeq) synapse-associated protein of 47 kDa

GO

GO:0007268   GO:0045202   GO:0048172   GO:0008306  

Length:

155

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00248

Exp number, first 60 AAs:

0.00188

Total prob of N-in:

0.10158

outside

1  -  155

 

 

Pi

158.675381

Theta

156.082966

Tajima's D

-0.558631

CLR

22.247119

CSRT

0.227388630568472

Interpretation

Uncertain