Gene

KWMTBOMO04188  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008729

Annotation

PREDICTED:_synapse-associated_protein_of_47_kDa_[Bombyx_mori]

Location

Bomo_Chr7(+):13116052-13121384      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.447 Nuclear   Reliability : 1.8

CDS

ATGTTCTCAGGTCTCACAAACCAGGTCAGCTCATGGATGGGAGCCGCTAAGGGCGAGCCGCAAGATGAAGAAGTACCCACCCCTACCAAAGACGCAACAGCAGAGGCCGCAGCCGACGTCGAAAGACAAAGTCCAACTAAAGGTGGCAGCAAGCTGGACATCATCACCAACGTGAAGTCACAGATGACCGGTTGGCTTGGTTCTGGCATCCCTATACCCGGGTTGAGAAAAAATGAACCCGCTGCTGCTGAATCTGCGGAGCCAGCTCCCGAACCAGAGCCTGAATTGAAGACAGACATCAAGGACGACGATGATAACTCCAGTGCCACTGGCGGCGCGGACAGCCGACCAGCTTCCACCGGGGGCACCCCCACTGAAGAGCAGCCGGCAGGTGTTGGCAACGTGACAACAAAAGCGGTCGCCGGCGCAAAGTCCCTGGGCAACTTCCTGTACTCCGCCGTGAACAAAGCCGGGGCCAAGGTCAGCGAGGCCAGCGCCAAGATCAAGAAGACGGTGGAAGAGAACGTGAGTACTAGATTAGGTTTTCCAGGTCTGGTCGGGGAATCTACTACAGGAGTTCACGATGCCGCACCCAGGCTGTACTCGATGCGCCAAAAGTCTGAGGAGATCATCGGGTAA

Protein

MFSGLTNQVSSWMGAAKGEPQDEEVPTPTKDATAEAAADVERQSPTKGGSKLDIITNVKSQMTGWLGSGIPIPGLRKNEPAAAESAEPAPEPEPELKTDIKDDDDNSSATGGADSRPASTGGTPTEEQPAGVGNVTTKAVAGAKSLGNFLYSAVNKAGAKVSEASAKIKKTVEENVSTRLGFPGLVGESTTGVHDAAPRLYSMRQKSEEIIG

Uniprot

H9JGT2   A0A194RDE7   A0A212F545   A0A194PW87   A0A2A4K3V9   A0A2W1B9X5   + More
A0A2A4K4F3   A0A2A4K4W3   A0A0L7LUL2   A0A139WPJ7   D6W7Y3   A0A0T6B916   V5GV31   A0A1W4XB29   A0A1Y1K415   A0A1Y1K6U5   A0A0L7QRP7   A0A026W9Q0   A0A1Y1K6Y0   A0A067QTV0   A0A1Y1K7P2   V9ID63   V9IDQ2   A0A2A3E8J4   N6T9F4   A0A088ALI7   A0A3L8DTK1   A0A195C6E2   A0A151WF77   K7IS96   A0A195FD03   A0A195BGG7   A0A0C9QS45   A0A1B6LES7   A0A0C9QMU4   A0A1B6KKR3   A0A1B6KPY6   A0A158NBL1   A0A2P8YK54   A0A1B6CA49   A0A1B6D2G3   A0A1B6CJQ8   A0A1B6JJR0   J9JKS9   A0A2S2QHD5   A0A2M3Z644   A0A182MKH8   A0A1B6G4E8   A0A2M4BKY2   A0A182UQ59   A0A182L6Z9   Q173T4   A0A182UH24   A0A1B6K2S3   A0A1B6LWB3   A0A154PR66   A0A182XX30   A0A1B6KTM1   A0A1B6MHT8   A0A084WP12   A0A2M4AQQ6   W5JGS8   A0A023F2E9   A0A2M3Z613   A0A2M4AMF0   Q173T6   A0A2M4BME8   A0A2M4CIA0   A0A182Q3J9   A0A2M4CI67   A0A182JCR9   A0A2M4BKT4   Q7PQP1   Q173T5   F5HL82   A0A069DS44   A0A1Q3FCF7   A0A0P4VTJ0   A0A1J1ILK8   A0A1J1IHV9   A0A1Q3FBW9   A0A1Q3FBU0   A0A1B6HPM1   A0A1J1IGL5   A0A1B6FPQ6   A0A1B6K805   A0A2H8TIX4   B0W694   A0A1S4EI98   A0A023EV36   U5ETZ9   A0A1L8DFU3   A0A1L8DFH8   F5HL81   A0A146LH73   A0A1B6CPZ5   A0A1B6E6R5  

Pubmed

19121390    26354079    22118469    28756777    26227816    18362917    + More
19820115    28004739    24508170    24845553    23537049    30249741    20075255    21347285    29403074    20966253    17510324    25244985    24438588    20920257    23761445    25474469    12364791    14747013    17210077    26334808    27129103    24945155    26823975   

EMBL

BABH01034407    BABH01034408    KQ460367    KPJ15489.1    AGBW02010265    OWR48850.1    + More
KQ459589    KPI97641.1    NWSH01000158    PCG78947.1    KZ150304    PZC71521.1    PCG78949.1    PCG78948.1    JTDY01000054    KOB79143.1    KQ971307    KYB29817.1    EFA11027.1    LJIG01009302    KRT83351.1    GALX01002939    JAB65527.1    GEZM01093617    JAV56219.1    GEZM01093615    JAV56221.1    KQ414775    KOC61303.1    KK107372    EZA51749.1    GEZM01093619    JAV56218.1    KK853022    KDR12365.1    GEZM01093616    JAV56220.1    JR039185    AEY58572.1    JR039184    AEY58571.1    KZ288324    PBC28093.1    APGK01039172    KB740967    KB632399    ENN76884.1    ERL94628.1    QOIP01000004    RLU23229.1    KQ978219    KYM96412.1    KQ983227    KYQ46471.1    KQ981673    KYN38288.1    KQ976500    KYM83262.1    GBYB01006564    JAG76331.1    GEBQ01017817    JAT22160.1    GBYB01004834    JAG74601.1    GEBQ01027944    JAT12033.1    GEBQ01026490    JAT13487.1    ADTU01011206    ADTU01011207    ADTU01011208    PYGN01000536    PSN44623.1    GEDC01027168    JAS10130.1    GEDC01017495    JAS19803.1    GEDC01023733    JAS13565.1    GECU01008291    JAS99415.1    ABLF02011535    GGMS01007962    MBY77165.1    GGFM01003229    MBW23980.1    AXCM01000384    GECZ01026628    GECZ01015277    GECZ01013618    GECZ01012463    GECZ01006200    JAS43141.1    JAS54492.1    JAS56151.1    JAS57306.1    JAS63569.1    GGFJ01004589    MBW53730.1    CH477416    EAT41364.1    GECU01013924    GECU01001934    JAS93782.1    JAT05773.1    GEBQ01011995    JAT27982.1    KQ435075    KZC14415.1    GEBQ01025209    JAT14768.1    GEBQ01004447    JAT35530.1    ATLV01024813    ATLV01024814    ATLV01024815    KE525361    KFB51956.1    GGFK01009793    MBW43114.1    ADMH02001267    ETN63291.1    GBBI01003523    JAC15189.1    GGFM01003208    MBW23959.1    GGFK01008630    MBW41951.1    EAT41363.1    GGFJ01004992    MBW54133.1    GGFL01000855    MBW65033.1    AXCN02000084    GGFL01000856    MBW65034.1    GGFJ01004539    MBW53680.1    AAAB01008880    EAA08554.6    EAT41365.1    EGK97041.1    GBGD01002036    JAC86853.1    GFDL01009781    JAV25264.1    GDKW01000018    JAI56577.1    CVRI01000050    CRK99345.1    CRK99346.1    GFDL01010057    JAV24988.1    GFDL01010066    JAV24979.1    GECU01031161    JAS76545.1    CRK99344.1    GECZ01017574    JAS52195.1    GECU01023619    GECU01000393    JAS84087.1    JAT07314.1    GFXV01002251    MBW14056.1    DS231847    EDS36441.1    GAPW01001254    JAC12344.1    GANO01002548    JAB57323.1    GFDF01008880    JAV05204.1    GFDF01008881    JAV05203.1    EGK97042.1    GDHC01011750    JAQ06879.1    GEDC01021739    JAS15559.1    GEDC01003678    JAS33620.1   

Proteomes

UP000005204    UP000053240    UP000007151    UP000053268    UP000218220    UP000037510    + More
UP000007266    UP000192223    UP000053825    UP000053097    UP000027135    UP000242457    UP000019118    UP000030742    UP000005203    UP000279307    UP000078542    UP000075809    UP000002358    UP000078541    UP000078540    UP000005205    UP000245037    UP000007819    UP000075883    UP000075903    UP000075882    UP000008820    UP000075902    UP000076502    UP000076408    UP000030765    UP000000673    UP000075886    UP000075880    UP000007062    UP000183832    UP000002320    UP000079169   

PRIDE

H9JGT2   

Pfam

PF03909   BSD

Interpro

IPR005607   BSD_dom        + More
IPR035925   BSD_dom_sf       

Gene 3D

1.10.3970.10    

ProteinModelPortal

H9JGT2   A0A194RDE7   A0A212F545   A0A194PW87   A0A2A4K3V9   A0A2W1B9X5   + More
A0A2A4K4F3   A0A2A4K4W3   A0A0L7LUL2   A0A139WPJ7   D6W7Y3   A0A0T6B916   V5GV31   A0A1W4XB29   A0A1Y1K415   A0A1Y1K6U5   A0A0L7QRP7   A0A026W9Q0   A0A1Y1K6Y0   A0A067QTV0   A0A1Y1K7P2   V9ID63   V9IDQ2   A0A2A3E8J4   N6T9F4   A0A088ALI7   A0A3L8DTK1   A0A195C6E2   A0A151WF77   K7IS96   A0A195FD03   A0A195BGG7   A0A0C9QS45   A0A1B6LES7   A0A0C9QMU4   A0A1B6KKR3   A0A1B6KPY6   A0A158NBL1   A0A2P8YK54   A0A1B6CA49   A0A1B6D2G3   A0A1B6CJQ8   A0A1B6JJR0   J9JKS9   A0A2S2QHD5   A0A2M3Z644   A0A182MKH8   A0A1B6G4E8   A0A2M4BKY2   A0A182UQ59   A0A182L6Z9   Q173T4   A0A182UH24   A0A1B6K2S3   A0A1B6LWB3   A0A154PR66   A0A182XX30   A0A1B6KTM1   A0A1B6MHT8   A0A084WP12   A0A2M4AQQ6   W5JGS8   A0A023F2E9   A0A2M3Z613   A0A2M4AMF0   Q173T6   A0A2M4BME8   A0A2M4CIA0   A0A182Q3J9   A0A2M4CI67   A0A182JCR9   A0A2M4BKT4   Q7PQP1   Q173T5   F5HL82   A0A069DS44   A0A1Q3FCF7   A0A0P4VTJ0   A0A1J1ILK8   A0A1J1IHV9   A0A1Q3FBW9   A0A1Q3FBU0   A0A1B6HPM1   A0A1J1IGL5   A0A1B6FPQ6   A0A1B6K805   A0A2H8TIX4   B0W694   A0A1S4EI98   A0A023EV36   U5ETZ9   A0A1L8DFU3   A0A1L8DFH8   F5HL81   A0A146LH73   A0A1B6CPZ5   A0A1B6E6R5  

KEGG

101736843    no KO assigned | (RefSeq) synapse-associated protein of 47 kDa

GO

Length:

212

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00169

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.03659

outside

1  -  212

 

 

Pi

218.788403

Theta

162.244382

Tajima's D

0.8739

CLR

0

CSRT

0.624018799060047

Interpretation

Uncertain