Gene
KWMTBOMO04187
Pre Gene Modal
BGIBMGA008660
Annotation
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_8-like_[Papilio_machaon]
Location in the cell
Mitochondrial Reliability : 1.281 Nuclear Reliability : 1.583 PlasmaMembrane Reliability : 1.011
Sequence
CDS
ATGACGGAAACACGCCGTAAACAATTGCACCTCGGGAAATGCATCGAAGATCTGGACAAATTACACAATGTTCCAGATTTGAAAACGAAACGGGCTAACCTGTTATGCAAGACAGCACAGAAATTGTTTGAAAGCGCCGAAGAAGCTCGGAAAAATGGTGACGAGGAGTACTCCTACGTATATTACATGAAATATTTGAGAGTCATAGCCTATCTGAGCAAAGATAAGGAGTATCTGAAGGATAAGTCATACTACAACAGCATGCTGGGAGCTAAGAACCCTAACAAGGCTATTGATGCTGCTGAGAAACTAAAGAACAGTCTTATAGACAGGTATGCAATGGAATTGAAGCAGAAACGTCTAAACGACATAAAAGAGAATGAGATATTCAAACAAAAGATTGAGGAGAACAGAAAGAAGGCCATTGAGGTCTCCATCAATGAGCCGCCTTCGACACCTGTCAACTTACCAGGTCCTGATGAGGTGACCATCAAAAGCGAACAACTCTATTCAATCTTGAAGGCCGGCAAGTTGAAGGTCATGATCCTTGATGCAAGACCTGGGAAAGATTACTTAGAATCTCACATCAGCTACCCGGCTTGTATCAGTGTGCCCGAAGAATGCATATCACCTGGCAACAACATCGATCTCCCATCATCAGGTATGTTGTCAGTCGTCGAAACATTGGCCAAAAAGGGAAAAGCTGAAATAAAGACTCAAAGAAAGGCTACTTATATGGACTTGGTCAGATTACCAAGTTTGAGGATTAAGAACTTGTGCTGCTGCGTCGTTTGGCTGGTGATTGGGATCAGCTTTTACGGCGGTACCCAATACTTTGGACAGACCAGTATAAATACATTCTTATCTGTCGCTGTGGGAGGTCTGGTGCAGATCCCTGGGCTACCACTGAGCGCGTATTTCTCGAAAAGATTTGGACGCCGTGTCGCCATCATTGGCATGTTCGTGATTAACTGCATTTGTAACCTGCTATTAGTTCTCCCTGACGCATGGTTTTATCTGAAGCTCGTGGCTGGTTCGATAGCCAACGCTTGCGGAGCGGCTGCGTTTTCTGTAGTGTAA
Protein
MTETRRKQLHLGKCIEDLDKLHNVPDLKTKRANLLCKTAQKLFESAEEARKNGDEEYSYVYYMKYLRVIAYLSKDKEYLKDKSYYNSMLGAKNPNKAIDAAEKLKNSLIDRYAMELKQKRLNDIKENEIFKQKIEENRKKAIEVSINEPPSTPVNLPGPDEVTIKSEQLYSILKAGKLKVMILDARPGKDYLESHISYPACISVPEECISPGNNIDLPSSGMLSVVETLAKKGKAEIKTQRKATYMDLVRLPSLRIKNLCCCVVWLVIGISFYGGTQYFGQTSINTFLSVAVGGLVQIPGLPLSAYFSKRFGRRVAIIGMFVINCICNLLLVLPDAWFYLKLVAGSIANACGAAAFSVV
Summary
Uniprot
ProteinModelPortal
PDB
2A9U
E-value=7.97883e-13,
Score=178
Ontologies
PATHWAY
GO
Topology
Length:
359
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
73.17616
Exp number, first 60 AAs:
0.00012
Total prob of N-in:
0.99671
inside
1 - 253
TMhelix
254 - 276
outside
277 - 285
TMhelix
286 - 308
inside
309 - 314
TMhelix
315 - 332
outside
333 - 335
TMhelix
336 - 358
inside
359 - 359
Population Genetic Test Statistics
Pi
259.223617
Theta
167.424787
Tajima's D
1.77153
CLR
234.150215
CSRT
0.845407729613519
Interpretation
Uncertain
