Gene

KWMTBOMO04186

Pre Gene Modal

BGIBMGA000182

Annotation

PREDICTED:_organic_cation_transporter_protein-like_[Bombyx_mori]

Location

Bomo_Chr7(-):13091281-13095701      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.726

CDS

ATGGACGGTACGAAACGGAAATCGGTAACTATTTCTGAAAAAATAGAAGATACACCGAAACAAGATGAAGATAAACTGATTCAAGCGATAGGTGAATTCGGGAGATGGCACGTGATGCTAACTATGACGCTATCTGCACCGATTCGAATGACGGCAGTCTGGAACCATTTGGGAATCATATTTCTGGCACCGAAAACTGAATTTATTTGCGCGGAGAGACGTAATAACAACGAAACCATCCAAGAATCGGAGTGCTACAGTGATTGTACTGAATACGAATACAAAACGGATTTCGTGAATACAATCATTTCTGAATGGGACCTAGTTTGCGATCGATCCTGGCTGACAAACTTCAACCAGACAGCTTGCATGTCCGGTGTTTTATTGGGCAGTATAGTTTTTGGATTTTTCGCTGATAGATTCGGTCGTCGTCCCGCTCTCCTGACGGCCTGCACCACGCAACTGATAGCTGGATTCACAGCGCCATTTTGCCCAAATTACATCACATTCACCTTGGTCCGATTCTTCAACGGCGCAGCTGTTGCTGGCGCATTACTGACTTCTTTTATTCTAATGATTGAAACCACGGGCATATCGAAAAGGGAACTAATGAACTGTATCGTTTCCGTGCCTCTGTCGGTGGGAGAAATGATAATGCCAATGTTTTCATATTACTTGAGGTCTTGGACTAGATATAGTTTTGGTCTCGCCCTGCCAAATTTGGTATTTTTGGTTTTATTCTTCATCGTACCAGAGTCTCCGAAGTGGTTGATTTCCGTTGGAAGGCTCGAGGAGGCGAGTTTGATTATGACGAAAATAGCGAAATGGAATAGACTTCCAACAGAAGACATGATGGATAGAGTAAAGATTATAGCATTTGAATCCAATGTTGACGCCCACAAAAACGTCAAGGCTACTTACTTAGACCTGATCAAAGTGCAGGAGATAAGGTGGAAGAATATCGGATGCTGTCTTACGTGGTTTATCCTCGGGCTGAGCTTCTATGGCAGCAATCAGTACATAGGACAGACCAGCCCTAATGTTTTCGTTGCTATTGCAATGGCTGGAGCTATTCAGACTACCTTTGACCCATTCCTTGTTCTATTACTGACCATAGAGACCGACTTAGCTGGAGGTCTTGAGGCTAATGAACTGATCATAATCGGCCACACGTTAACAGCCAAAAAGTAG

Protein

MDGTKRKSVTISEKIEDTPKQDEDKLIQAIGEFGRWHVMLTMTLSAPIRMTAVWNHLGIIFLAPKTEFICAERRNNNETIQESECYSDCTEYEYKTDFVNTIISEWDLVCDRSWLTNFNQTACMSGVLLGSIVFGFFADRFGRRPALLTACTTQLIAGFTAPFCPNYITFTLVRFFNGAAVAGALLTSFILMIETTGISKRELMNCIVSVPLSVGEMIMPMFSYYLRSWTRYSFGLALPNLVFLVLFFIVPESPKWLISVGRLEEASLIMTKIAKWNRLPTEDMMDRVKIIAFESNVDAHKNVKATYLDLIKVQEIRWKNIGCCLTWFILGLSFYGSNQYIGQTSPNVFVAIAMAGAIQTTFDPFLVLLLTIETDLAGGLEANELIIIGHTLTAKK

Uniprot

H9ISF5   H9JGL2   A0A2H1VMD7   A0A2W1BFH6   A0A0L7LUI9   A0A2A4K5L0   + More
A0A194RHR5   A0A2A4J3B3   A0A2W1BP27   A0A212F8L3   A0A2H1VGH7   I4DNF7   A0A194PMC3   H9JNB3   A0A2A4KA95   A0A194QN55   A0A2A4K9Y1   A0A194PY14   A0A1J1IHN1   A0A1B0C9J9   A0A2A4K9Y5   A0A2H1W3H1   A0A1Q3FH65   V5IAH1   D6WKJ1   B0X4Q4   A0A1Y1KD57   A0A1Y1K9J5   Q17CS1   D6WKJ0   A0A088ALA3   A0A023EUG3   A0A182H4N7   A0A0L7QRN1   A0A182T1C6   H9JNI6   A0A154P8V9   A0A182PAB8   A0A182Y4D6   A0A2W1BCH7   A0A182VI17   A0A2A3ESR9   K7ITG9   A0A182TEQ3   A0A182QLT3   A0A2H1VUP3   A0A0M9A4G4   A0A182WRH0   Q7QDB3   A0A182HUA7   D6X4T8   A0A2M4CTR9   A0A2M4CU13   A0A182W090   A0A182K794   A0A310SN29   B3NK59   A0A2J7RBY0   B4HPT1   A0A194QK42   U4UII8   A0A0M9A1C2   N6T164   A0A182MBN7   A0A182JCT1   A0A182NFM5   Q7K3M6   B4PAQ3   B4QEI8   E2BIH0   A0A232F564   A0A182RNN4   A0A2A4J566   A0A182F7G4   A0A212FFR4   A0A2W1BI79   A0A195DRF1   A0A194QIQ7   B3MH68   A0A088A3V4   B4MRV4   A0A0M3QVP8   K7JAK3   A0A1W4VGV5   A0A084VXP9   A0A310SUT5   E2A1J5   A0A1B6EKM5   A0A026W714   A0A158NPS8   A0A195ATZ5   B4JWE6   A0A0L7LUK1   A0A195FCZ0   A0A232EL12   E1ZZY2   W8B6P2   A0A151IP62   A0A2A3ELA5  

Pubmed

19121390    28756777    26227816    26354079    22118469    22651552    + More
18362917    19820115    28004739    17510324    24945155    26483478    25244985    20075255    12364791    14747013    17210077    17994087    23537049    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    22936249    20798317    28648823    24438588    24508170    21347285    24495485   

EMBL

BABH01044534    BABH01044535    BABH01034412    BABH01034413    ODYU01003353    SOQ42005.1    + More
KZ150304    PZC71520.1    JTDY01000054    KOB79138.1    NWSH01000158    PCG78950.1    KQ460367    KPJ15486.1    NWSH01003717    PCG65892.1    KZ149948    PZC76718.1    AGBW02009713    OWR50049.1    ODYU01002452    SOQ39959.1    AK402884    BAM19447.1    KQ459600    KPI94138.1    BABH01019600    NWSH01000020    PCG80713.1    KQ461195    KPJ06789.1    PCG80714.1    KQ459589    KPI97639.1    CVRI01000052    CRK99712.1    AJWK01002434    AJWK01002435    AJWK01002436    PCG80708.1    ODYU01006026    SOQ47506.1    GFDL01008134    JAV26911.1    GALX01001195    JAB67271.1    KQ971342    EFA04007.2    DS232350    EDS40471.1    GEZM01088532    JAV58130.1    GEZM01088533    JAV58129.1    CH477305    EAT44124.1    EFA04006.1    GAPW01001011    JAC12587.1    JXUM01109993    KQ565372    KXJ71040.1    KQ414775    KOC61282.1    BABH01019597    KQ434827    KZC07658.1    KZ150301    PZC71534.1    KZ288189    PBC34564.1    AAZX01006832    AXCN02000238    ODYU01004551    SOQ44555.1    KQ435759    KOX75743.1    AAAB01008859    EAA07935.5    APCN01000614    KQ971381    EEZ97586.2    GGFL01004566    MBW68744.1    GGFL01004591    MBW68769.1    KQ762190    OAD56165.1    CH954179    EDV55264.1    NEVH01005889    PNF38331.1    CH480816    EDW48649.1    KQ461198    KPJ05943.1    KB632314    ERL92208.1    KQ435794    KOX73779.1    APGK01048466    KB741110    ENN73834.1    AXCM01003853    AE013599    AY058478    BT120184    AAF57511.1    AAL13707.1    ADB91432.1    CM000158    EDW91444.1    KRJ99843.1    CM000362    CM002911    EDX07862.1    KMY95206.1    GL448504    EFN84558.1    NNAY01000983    OXU25618.1    NWSH01003004    PCG67121.1    AGBW02008774    OWR52572.1    KZ150029    PZC74769.1    KQ980581    KYN15387.1    KQ459185    KPJ03336.1    CH902619    EDV36845.1    CH963850    EDW74843.1    CP012524    ALC42779.1    AAZX01002446    ATLV01018145    KE525215    KFB42743.1    KQ760085    OAD61975.1    GL435766    EFN72668.1    GECZ01031285    JAS38484.1    KK107372    EZA51773.1    ADTU01022726    KQ976745    KYM75454.1    CH916375    EDV98284.1    KOB79137.1    KQ981673    KYN38256.1    NNAY01003667    OXU19035.1    GL435531    EFN73254.1    GAMC01009685    JAB96870.1    KQ976914    KYN07128.1    KZ288225    PBC31939.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000007151    UP000053268    + More
UP000183832    UP000092461    UP000007266    UP000002320    UP000008820    UP000005203    UP000069940    UP000249989    UP000053825    UP000075901    UP000076502    UP000075885    UP000076408    UP000075903    UP000242457    UP000002358    UP000075902    UP000075886    UP000053105    UP000076407    UP000007062    UP000075840    UP000075920    UP000075881    UP000008711    UP000235965    UP000001292    UP000030742    UP000019118    UP000075883    UP000075880    UP000075884    UP000000803    UP000002282    UP000000304    UP000008237    UP000215335    UP000075900    UP000069272    UP000078492    UP000007801    UP000007798    UP000092553    UP000192221    UP000030765    UP000000311    UP000053097    UP000005205    UP000078540    UP000001070    UP000078541    UP000078542   

PRIDE

H9ISF5    H9JGL2    H9JNB3    H9JNI6    Q7K3M6   

Pfam

PF00083   Sugar_tr        + More
PF00400   WD40
PF12341   Mcl1_mid
PF12894   ANAPC4_WD40
PF08969   USP8_dimer
PF07690   MFS_1
PF03022   MRJP

Interpro

IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR005828   MFS_sugar_transport-like       
IPR005829   Sugar_transporter_CS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR022100   Mcl1_mid       
IPR017986   WD40_repeat_dom       
IPR019775   WD40_repeat_CS       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR024977   Apc4_WD40_dom       
IPR011041   Quinoprot_gluc/sorb_DH       
IPR015063   USP8_dimer       
IPR011701   MFS       
IPR017996   Royal_jelly/protein_yellow       
IPR011042   6-blade_b-propeller_TolB-like       

SUPFAM

SSF103473   SSF103473        + More
SSF50978   SSF50978       
SSF50952   SSF50952       

Gene 3D

2.130.10.10     2.120.10.30    

CDD

cd06174  MFS

ProteinModelPortal

H9ISF5   H9JGL2   A0A2H1VMD7   A0A2W1BFH6   A0A0L7LUI9   A0A2A4K5L0   + More
A0A194RHR5   A0A2A4J3B3   A0A2W1BP27   A0A212F8L3   A0A2H1VGH7   I4DNF7   A0A194PMC3   H9JNB3   A0A2A4KA95   A0A194QN55   A0A2A4K9Y1   A0A194PY14   A0A1J1IHN1   A0A1B0C9J9   A0A2A4K9Y5   A0A2H1W3H1   A0A1Q3FH65   V5IAH1   D6WKJ1   B0X4Q4   A0A1Y1KD57   A0A1Y1K9J5   Q17CS1   D6WKJ0   A0A088ALA3   A0A023EUG3   A0A182H4N7   A0A0L7QRN1   A0A182T1C6   H9JNI6   A0A154P8V9   A0A182PAB8   A0A182Y4D6   A0A2W1BCH7   A0A182VI17   A0A2A3ESR9   K7ITG9   A0A182TEQ3   A0A182QLT3   A0A2H1VUP3   A0A0M9A4G4   A0A182WRH0   Q7QDB3   A0A182HUA7   D6X4T8   A0A2M4CTR9   A0A2M4CU13   A0A182W090   A0A182K794   A0A310SN29   B3NK59   A0A2J7RBY0   B4HPT1   A0A194QK42   U4UII8   A0A0M9A1C2   N6T164   A0A182MBN7   A0A182JCT1   A0A182NFM5   Q7K3M6   B4PAQ3   B4QEI8   E2BIH0   A0A232F564   A0A182RNN4   A0A2A4J566   A0A182F7G4   A0A212FFR4   A0A2W1BI79   A0A195DRF1   A0A194QIQ7   B3MH68   A0A088A3V4   B4MRV4   A0A0M3QVP8   K7JAK3   A0A1W4VGV5   A0A084VXP9   A0A310SUT5   E2A1J5   A0A1B6EKM5   A0A026W714   A0A158NPS8   A0A195ATZ5   B4JWE6   A0A0L7LUK1   A0A195FCZ0   A0A232EL12   E1ZZY2   W8B6P2   A0A151IP62   A0A2A3ELA5  

PDB

4QIQ     E-value=1.79811e-09,     Score=150

KEGG

101741602    no KO assigned | (RefSeq) organic cation transporter protein-like

GO

GO:0022857   GO:0016021   GO:0003677   GO:0003824   GO:0055085   GO:0006366   GO:0006384   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

Length:

396

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

128.83242

Exp number, first 60 AAs:

2.34326

Total prob of N-in:

0.87841

inside

1  -  113

TMhelix

114  -  136

outside

137  -  145

TMhelix

146  -  168

inside

169  -  174

TMhelix

175  -  197

outside

198  -  227

TMhelix

228  -  250

inside

251  -  320

TMhelix

321  -  343

outside

344  -  347

TMhelix

348  -  370

inside

371  -  396

 

 

Pi

232.376667

Theta

41.211669

Tajima's D

-1.549115

CLR

130.75318

CSRT

0.056247187640618

Interpretation

Uncertain