Silkworm Genome Informatics Database

Gene

KWMTBOMO04182

Pre Gene Modal

BGIBMGA008662

Annotation

Uncharacterized_protein_OBRU01_00994_[Operophtera_brumata]

Location

Bomo_Chr7(-):13004905-13006331 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.461

CDS

ATGGATTGCTACGGTTCCGATTCAGACGAAGAATTTGAAGTATGCCCAATCAGATCAAACTCATATGCTTTGCCTTTCGACCCTACATCATTAGAAAATATAATTCTAACCATTTGTGATAATTTTGATTTCCGTCTGGTACTAAGCAGTGACAGAGCAAAGGGGGCTTTAATTGTGACTACTGGCTTAACGTTTGCTGGGGGGATGTTGGGCAGATATTACGGAGGCAGAGTCGGTGCCATGGTTGGTGGCGCTGTTGGCGGGGTCTGTGGGTTGGGCATTGTTGCTGTCTCGATGAGGGACGTCTGGGAGGACATAAAAGCCAAACTAGCTGAATTATTCGATATAGTTTATGACTATTTAGCCGGCATGGGCATTGATGATTACAAAAACGCAATAACATTTTTGAATCAGCACAGAGGGAGTAACGTGCAACTTGCTTTAATCATTGCAGAAACGGCTTCAAGTATTCTGGGAAAGAAGGTTCTGTCCAGTCTTAGCGCGTCTTAG

Protein

MDCYGSDSDEEFEVCPIRSNSYALPFDPTSLENIILTICDNFDFRLVLSSDRAKGALIVTTGLTFAGGMLGRYYGGRVGAMVGGAVGGVCGLGIVAVSMRDVWEDIKAKLAELFDIVYDYLAGMGIDDYKNAITFLNQHRGSNVQLALIIAETASSILGKKVLSSLSAS

Uniprot

A0A0L7LUL1 A0A2A4K3X1 A0A2H1WJW1 A0A212F4V3 A0A194RCZ6 A0A2W1C041 + More
A0A194Q2L1 S4PCL4 A0A1E1WLQ3 A0A2A4K3W9 A0A2W1BUX5 A0A2H1WJD3 S4P6S9

Pubmed

26227816 22118469 26354079 28756777 23622113

EMBL

JTDY01000054 KOB79140.1 NWSH01000158 PCG78957.1 ODYU01009057 SOQ53192.1 + More
AGBW02010305 OWR48764.1 KQ460367 KPJ15492.1 KZ149929 PZC77433.1 KQ459589 KPI97645.1 GAIX01004131 JAA88429.1 GDQN01003621 GDQN01003115 JAT87433.1 JAT87939.1 PCG78955.1 PZC77434.1 SOQ53193.1 GAIX01004894 JAA87666.1

Proteomes

UP000037510 UP000218220 UP000007151 UP000053240 UP000053268

ProteinModelPortal

A0A0L7LUL1 A0A2A4K3X1 A0A2H1WJW1 A0A212F4V3 A0A194RCZ6 A0A2W1C041 + More
A0A194Q2L1 S4PCL4 A0A1E1WLQ3 A0A2A4K3W9 A0A2W1BUX5 A0A2H1WJD3 S4P6S9

KEGG

105841578 no KO assigned | (RefSeq) uncharacterized LOC105841578

GO

GO:0016021

Length:

169

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

33.54081

Exp number, first 60 AAs:

3.93279

Total prob of N-in:

0.44876

outside

1 - 76

TMhelix

77 - 99

inside

100 - 169

Pi

160.198003

Theta

113.196712

Tajima's D

0.361524

CLR

0.10818

CSRT

0.474526273686316

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics