SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04179  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008664
Annotation
PREDICTED:_chromatin_target_of_PRMT1_protein-like_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 3.181
 

Sequence

CDS
ATGAAGCGGGCGACATTACGTCAACGGCTTGGACTGGGTCAAGCACCATTCCATCAGTTCGATAATCGGAACACCTTCCAGAGCTTGATGAGGTCAAACAGCACCAGTAACCTCAGCAACAGAAGCGTCAAGACTCGAATTGGCCGGAGACAGTTCAACGGCAATTTAAATCGGTCAGCATCGTTCGGTGACCTGTCAATGGCTGGTGCCGGGCGACCACTGCGGGGGTTCCGGCGCCGCGGAGGCGGGCCGCGGGCAGTCCGGGGAAGATTCAGTCGCGGCGCCGGCCAGCAGTCCGGGCGCGTCACCAGGGTGGCGCAGCGCGGCCGCCACGCCACCAGACCCACAGGTCGCGTGCCCCGCAGTCAGCAACAGAAGCCGGTGCCCAGCAGGGAACAGCTGGACGCGGAACTGGACCAATACATGGCCAGCTCCAAGTCCGCCCTGGATCTTGAGTTAGAAGCCTACATGAGAGAAGCCGAGCTGCTTGAGTGA
Protein
MKRATLRQRLGLGQAPFHQFDNRNTFQSLMRSNSTSNLSNRSVKTRIGRRQFNGNLNRSASFGDLSMAGAGRPLRGFRRRGGGPRAVRGRFSRGAGQQSGRVTRVAQRGRHATRPTGRVPRSQQQKPVPSREQLDAELDQYMASSKSALDLELEAYMREAELLE

Summary

Pfam
PF13865   FoP_duplication
Interpro
IPR025715   FoP_C       

Ontologies

GO

Topology

Length:
164
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02911
Exp number, first 60 AAs:
0.01047
Total prob of N-in:
0.42440
outside
1  -  164
 
 

Population Genetic Test Statistics

Pi
213.172025
Theta
136.639087
Tajima's D
0.727591
CLR
0.355339
CSRT
0.583970801459927
Interpretation
Uncertain
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