SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04178
Pre Gene Modal
BGIBMGA008665
Annotation
hypothetical_protein_KGM_02369_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 2.197 Nuclear   Reliability : 1.564
 

Sequence

CDS
ATGTGCGTCAAGGGCAAATTGTGCTGCGTCTCCCAGGATAAGTTCAAGGACCGCCGCCCTTCGGATCTCGTTGTGCCCATCGAGAAGAAGCAGTCTTCTAAGCGGCCCAGTACTGCATTGACGACGACCTCACCACCGAAACGCAAGTACAGGAAGTGCAAAGGCGAGTGCACGGGAGGGCTGGCCGCGCTGTTCTGTGACCGAGTCGACGAGGACGCGGACTGCCCCAACTTGGAGACGTGCTGCCTCAAGGACACGAGACTGGAGACCACCACAAGACGACCTGCCTCCTCACCACGGCCGAGACCCAGGCCCACTCAGCCTCCACTACCGGCTTGTCCTGGATACTGCTTCCTGAACTTAATGGCGGCGTTCTGCCCAAGACCTTCCGTAATCCTCACCAACACCGACTGCAAGAACATTGGATCCCTTTGCTGCGACACTAGGTACGTGGCTTCTATAAACGAGGAAAATATTTAA
Protein
MCVKGKLCCVSQDKFKDRRPSDLVVPIEKKQSSKRPSTALTTTSPPKRKYRKCKGECTGGLAALFCDRVDEDADCPNLETCCLKDTRLETTTRRPASSPRPRPRPTQPPLPACPGYCFLNLMAAFCPRPSVILTNTDCKNIGSLCCDTRYVASINEENI

Summary

Similarity
Belongs to the peptidase S1 family.
EMBL
BABH01034397    AGBW02010265    OWR48843.1    ODYU01009057    SOQ53197.1    NWSH01000158    + More
PCG78951.1    KQ460367    KPJ15496.1    KZ149929    PZC77439.1    JTDY01001818    KOB72796.1    KQ459589    KPI97650.1    AJVK01036844    AJVK01036845    KQ971307    EFA11565.2    DS231877    EDS42125.1    KB632384    ERL94229.1    APGK01047061    APGK01047062    KB741077    ENN74098.1    KQ435007    KZC13414.1    CH477234    EAT46741.2    JXUM01137384    KQ568570    KXJ68952.1    KQ435710    KOX79829.1    ADMH02001605    ETN61856.1    AJWK01004146    AJWK01004147    GL888797    EGI58028.1    GL768153    EFZ11946.1    KQ977901    KYM98880.1    NEVH01008206    PNF34708.1    PYGN01000139    PSN53112.1    APCN01000570    AAAB01008859    EAA08096.5    ATLV01019061    KE525259    KFB43544.1    AXCM01001634    KQ414588    KOC70455.1    KQ979060    KYN23168.1    KK107128    EZA58384.1    DS235199    EEB13163.1    KQ982577    KYQ54640.1    QOIP01000006    RLU21281.1    AXCN02000328    ACPB03014181    FX985333    BAX07346.1    ADTU01028662    GGMS01015558    MBY84761.1    CVRI01000029    CRK92492.1    KK856477    PTY25856.1    UFQT01001460    SSX30655.1    UFQT01000280    SSX22733.1    GGMR01019492    MBY32111.1    GGMR01009688    MBY22307.1    ABLF02016016    GL434297    EFN75038.1    PCG78952.1    QCYY01002540    ROT69647.1    KQ981272    KYN43833.1    GL450389    EFN81044.1   
Pfam
PF18398   CLIP_SPH_mas        + More
PF00089   Trypsin
Interpro
IPR040479   CLIP_SPH_mas        + More
IPR001254   Trypsin_dom       
IPR018114   TRYPSIN_HIS       
IPR001314   Peptidase_S1A       
IPR009003   Peptidase_S1_PA       
SUPFAM
SSF50494   SSF50494       

Ontologies

Topology

Length:
159
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.03956
Exp number, first 60 AAs:
0
Total prob of N-in:
0.25151
outside
1  -  159
 
 

Population Genetic Test Statistics

Pi
26.707393
Theta
37.912339
Tajima's D
-1.17076
CLR
0.105435
CSRT
0.105394730263487
Interpretation
Uncertain
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