Gene

KWMTBOMO04174

Pre Gene Modal

BGIBMGA008666

Annotation

PREDICTED:_NGFI-A-binding_protein_homolog_[Bombyx_mori]

Location

Bomo_Chr7(-):12843450-12847082      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.187

CDS

ATGGCCCTAGTGGGAATGGCCTCCAAGCCTCTCCACGTTAGACGCCTTCAGAAGGCCCTGCAGGAATGGGTCAACAATCCCGCGCTCTTCCAAATACCGATCGTACCTAATTTATGTCCAAGCGAAAACCCCTTCATACAGTGTAACCAAAGGCTGATTAATATACCACCAGCTCATCCCAATGTACTTCCGAGAACCGTTGCTTCACCCGAGAGCAGACCCATGTACAGTCCCTCTCCAGGAGCTCCAGAAAACAGCTGTGGTTCCACAACCTCCCAACCTAACGCTAGTCCGACAAACACCTTTACCAAAATAGTCCTACCCCCGTCTCCTGCCCCAACTGCTCCCATAACCACAGCCGTATCAAGGTCGTTTTCCCCCCAAAGCGCGTGTCCACCTGCATCAGCGGGCTCTAGTCCAGGTTCCGTGACGTCACCAGTCCAAATAACTCCAGTGCTATTGGACGTTCATGTACAAAAGCTATCGGCGGCCGCGAAAAAGTTGAGTAAGCATTTGCCTCAATTGGAGCCGAAGCCGCAGAACACGAAAAAGAAGATGTGCAAGGATCTAGAGCTGGTCATGTTGATGCCCGAGTCGGATCCTCGGAGGATGGAAGAGATCAGGAAGTACGCTGCGATCTACGGGAGGTTTGACTGCAAGAGGAAACCGGAAAAGCCCCTGACGTTACACGAGGTAATGGTGAACGAAGCTGCAGCTCAGATGTGCCGATGCGTCCCTGCGCTCCTCACGAGGCGAGACGAGCTGTTTCCTTTAGCGAGGCAGCTTGTCAGGAGAGCTGGACTCCATTACTCCAAGCACGGGCTCCCCCCAACAGCTTCCACTGGAGAAGATCGTGATGAAGAAGAGCCCACCCCGAAGCGGCCTCGTCAGGTCACACACGTAGACCTCACAGACTAG

Protein

MALVGMASKPLHVRRLQKALQEWVNNPALFQIPIVPNLCPSENPFIQCNQRLINIPPAHPNVLPRTVASPESRPMYSPSPGAPENSCGSTTSQPNASPTNTFTKIVLPPSPAPTAPITTAVSRSFSPQSACPPASAGSSPGSVTSPVQITPVLLDVHVQKLSAAAKKLSKHLPQLEPKPQNTKKKMCKDLELVMLMPESDPRRMEEIRKYAAIYGRFDCKRKPEKPLTLHEVMVNEAAAQMCRCVPALLTRRDELFPLARQLVRRAGLHYSKHGLPPTASTGEDRDEEEPTPKRPRQVTHVDLTD

Uniprot

H9JGL9   A0A2H1WRR5   A0A2A4J967   A0A3S2LFD9   A0A2W1BSX2   A0A2A4JAQ0   + More
A0A194RDF7   A0A194PWE9   A0A0N1IKC6   A0A212EIF4   A0A139WPK6   A0A1Y1NPB6   Q7PR72   A0A2H8TJ41   Q17J65   A0A1S4F0Q4   A0A1J1HWL4   A0A1I8ME81   A0A182GSL7   B4LB90   A0A1B0DDK9   A0A1A9UG60   A0A1S3H5R6   A0A1S3H5Q7   A0A1S3H632   A0A1S3H8K7   A0A0V1EF90   A0A0V1FUT4   A0A0V1EF72   A0A0V0U203   A0A0V1N243   A0A0V1HY21   A0A0V0U209   A0A0V1ABR9  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
28004739    12364791    14747013    17210077    17510324    25315136    26483478    17994087   

EMBL

BABH01034390    ODYU01010532    SOQ55707.1    NWSH01002341    PCG68491.1    RSAL01000020    + More
RVE52568.1    KZ149929    PZC77441.1    PCG68492.1    KQ460367    KPJ15499.1    KQ459589    KPI97652.1    LADI01009388    KPJ20703.1    AGBW02014657    OWR41266.1    KQ971307    KYB29827.1    GEZM01000753    JAV98286.1    AAAB01008859    EAA07728.6    GFXV01002320    MBW14125.1    CH477234    EAT46742.1    CVRI01000029    CRK92495.1    JXUM01084986    JXUM01084987    JXUM01084988    KQ563471    KXJ73779.1    CH940647    EDW68654.2    AJVK01005402    JYDR01000044    JYDS01000202    JYDV01000109    KRY72478.1    KRZ21539.1    KRZ32638.1    JYDU01000114    JYDT01000028    KRX92344.1    KRY89784.1    KRY72477.1    JYDJ01000079    KRX45272.1    JYDO01000015    KRZ78049.1    JYDP01000017    KRZ15598.1    KRX45273.1    JYDQ01000011    KRY22225.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000007266    UP000007062    UP000008820    UP000183832    UP000095301    UP000069940    UP000249989    UP000008792    UP000092462    UP000078200    UP000085678    UP000054632    UP000054805    UP000054826    UP000054815    UP000054995    UP000055048    UP000054843    UP000055024    UP000054783   

PRIDE

H9JGL9   

Pfam

PF04905   NCD2        + More
PF04904   NCD1

Interpro

IPR006988   Nab_N        + More
IPR039040   NAB_fam       
IPR038398   NCD2_sf       
IPR006989   NAB_co-repressor_dom       
IPR013761   SAM/pointed_sf       

SUPFAM

SSF47769   SSF47769       

Gene 3D

3.40.390.60     1.10.150.50    

ProteinModelPortal

H9JGL9   A0A2H1WRR5   A0A2A4J967   A0A3S2LFD9   A0A2W1BSX2   A0A2A4JAQ0   + More
A0A194RDF7   A0A194PWE9   A0A0N1IKC6   A0A212EIF4   A0A139WPK6   A0A1Y1NPB6   Q7PR72   A0A2H8TJ41   Q17J65   A0A1S4F0Q4   A0A1J1HWL4   A0A1I8ME81   A0A182GSL7   B4LB90   A0A1B0DDK9   A0A1A9UG60   A0A1S3H5R6   A0A1S3H5Q7   A0A1S3H632   A0A1S3H8K7   A0A0V1EF90   A0A0V1FUT4   A0A0V1EF72   A0A0V0U203   A0A0V1N243   A0A0V1HY21   A0A0V0U209   A0A0V1ABR9  

PDB

2YUF     E-value=5.85818e-22,     Score=256

KEGG

101736180    K22388 NGFI-A-binding protein | (RefSeq) NGFI-A-binding protein homolog

GO

GO:0045892   GO:0005634   GO:0006355   GO:0007626   GO:0048666   GO:0003712   GO:0014019   GO:0035222   GO:0008283   GO:0016020   GO:0005515   GO:0016021   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

PANTHER

PTHR12623  

Length:

305

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00041

Exp number, first 60 AAs:

0.00041

Total prob of N-in:

0.01038

outside

1  -  305

 

 

Pi

182.530829

Theta

123.634329

Tajima's D

1.55174

CLR

0.006447

CSRT

0.800209989500525

Interpretation

Uncertain