SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04171
Pre Gene Modal
BGIBMGA008669
Annotation
PREDICTED:_solute_carrier_organic_anion_transporter_family_member_2B1-like_[Bombyx_mori]
Full name
Solute carrier organic anion transporter family member      
Location in the cell
PlasmaMembrane   Reliability : 4.95
 

Sequence

CDS
ATGATGCTACAAGGGAGAACAGTATTTCACAAGTTATGGTACTTCCTCCAAACGTATATCCTGACGCTGAAGAGGTTCGACCTGTTCCTCCAGGGTACCCTGCTTATCGTCATCCTGCTGGAGAGCAACGTGTACTTGCTGCTGAAGAGGGACGCGGACCAGGGTTACAGTACACCTCTTATTGAAAGCTGGGTACAAATCGCAGCAGGTGTCATAGAATGCGTATTGGGAGTTGTTCTGGCGTGGTGGGGGTCTGGTCGACGGCAGTTCGCGCTGACGGGATGGCTAGGAGCCTCCGCTACAGCTGGATTACTGGTCTTAGCATTTCCTTTCGCGTATTCTAATCCTGCGAATGTGGAACTATGCGGGGGTGAACCGGCCTTTCGATCCATAAACCCTAGAGACGAGAACGTGACACCTCGCACCGGGATTCTGGTACTGACGGCGCTGCTATGTGCCCTCACGAAGGTCAGCATCTGGGCGCACGGATTAACCTACTTAGACGACCATGACCCGACCAACGGCCCTTACTTCTATGGTATTCTCATATCGATTCGTTTGTCACTCGGGTTGAGCGGCACCAACTGGTTCCGCCCGAGCTCAGTACGAGACGACTGGTGGGAGGGCCAGCTCTCCGCGTCGATGCTGACGATGATGTTCGCCATTCTCTTCACGTTCTTCCCGACCAAGATGCCACAGTGGCAGGAGGAGGAAGTCACAGTGGATACAGATTTCCTGCCGTCCCTGTATCGAGTGATCAACAATAGAATAGTGGTGATCCAGTCTGTGGCTCTCTCTCTACTCACTACTGCAATCTTCTGCTACGTCGAATACGACCATGCATACGTTCAGGCTCGTTTCCACGTCGAGGCTCTCAGACAGGATCTCAGGACCTCACGATTTTTGAGCGACTTCTTCAGATCGCTGGTCGTCATTTTCTTCATTATGATATTCAGGGTGAGATTCTCAGCGCGTCGTCCTGACGGCGTGAAGGCCAACACGGCGGCTCGAGTGGGCGGCGTGGTGGCTGTCTTCGTGGCCATATTCTTCGTGGTCCTGGCTTCCCTGGGCTGCGACACGGGCACACTCGCGGGGCTGGACGAGGAATACGTTCAGCCAGAGTGCAGTCAGCAATGCGGATGCAACTCGGCTAGATACGGGTTCAGCCCGGTCTGTGGGCTGGACACGCTCACGACGTACTTCTCTCCCTGCCACGCAGGCTGCCGGGCCGTGGAAGACCTTAACGGGTTCTCGTTGTACGCGGACTGCACGTGCGGGGCGCAACGCGCGGCTCTCGGGGCCTGCGCCCTTAGCACGTGCTCCGTGCCCTTCAGTATCTACCAGATATTCTACACTATTATACTTGCAGTCTCAGGAGCATCGTTCCTGATGCAAGGCATGGTGCTAGTGAGGGCGGTCCGCAGGGTCGATAAACCGATCGCGATTGGATTCTCTTTCGCTCTGGTGGCGCTCCTGTCCTTTGTCGTCGGAAGACTACTGTACATGCTCATCAGTTGTAAGTTACCGGTTTCCACATTCGACTCTAGGTTTGAAGAAGACATCGCCCTACCCTGGAACGACCACATAGCCCGAACGTTAACTGCTCATTCTTTAAAAAGAGCGTTTTATGTACTTCCGTAA
Protein
MMLQGRTVFHKLWYFLQTYILTLKRFDLFLQGTLLIVILLESNVYLLLKRDADQGYSTPLIESWVQIAAGVIECVLGVVLAWWGSGRRQFALTGWLGASATAGLLVLAFPFAYSNPANVELCGGEPAFRSINPRDENVTPRTGILVLTALLCALTKVSIWAHGLTYLDDHDPTNGPYFYGILISIRLSLGLSGTNWFRPSSVRDDWWEGQLSASMLTMMFAILFTFFPTKMPQWQEEEVTVDTDFLPSLYRVINNRIVVIQSVALSLLTTAIFCYVEYDHAYVQARFHVEALRQDLRTSRFLSDFFRSLVVIFFIMIFRVRFSARRPDGVKANTAARVGGVVAVFVAIFFVVLASLGCDTGTLAGLDEEYVQPECSQQCGCNSARYGFSPVCGLDTLTTYFSPCHAGCRAVEDLNGFSLYADCTCGAQRAALGACALSTCSVPFSIYQIFYTIILAVSGASFLMQGMVLVRAVRRVDKPIAIGFSFALVALLSFVVGRLLYMLISCKLPVSTFDSRFEEDIALPWNDHIARTLTAHSLKRAFYVLP

Summary

Similarity
Belongs to the organo anion transporter (TC 2.A.60) family.
EMBL
BABH01034380    BABH01034381    BABH01034382    BABH01034383    NWSH01000785    PCG74221.1    + More
GDQN01002552    JAT88502.1    AGBW02013393    OWR43493.1    ODYU01006865    SOQ49092.1    KQ459589    KPI97657.1    ODYU01011542    SOQ57347.1    AGBW02009190    OWR51439.1    KQ460367    KPJ15507.1    CH916368    EDW04211.1    KPI97658.1    CP012523    ALC40040.1    CH963857    EDW76512.1    OUUW01000004    SPP78947.1    NEVH01026092    PNF14779.1    CH477459    EAT40590.1    ADMH02000254    ETN67232.1    APCN01001640    CH954177    EDV58791.2    AXCM01000664    CH479180    EDW28768.1    JXUM01002456    JXUM01002457    JXUM01002458    KQ560139    KXJ84224.1    AAAB01008980    EAA43589.4    CH480831    EDW45923.1    CM002910    KMY89925.1    AE014134    AY071008    AAF53197.2    AAL48630.1    CH933807    EDW11396.2    CM000361    EDX04813.1    CH902620    EDV32122.1    KQ414659    KOC65602.1    CVRI01000001    CRK86316.1    AXCN02001989    JXJN01003180    JRES01000869    KNC27652.1    KQ979701    KYN19601.1    UFQS01000438    UFQT01000438    SSX03941.1    SSX24306.1    GL888148    EGI66487.1    KQ981248    KYN44258.1    LJIG01022578    KRT79830.1    GFXV01002947    MBW14752.1    KQ434786    KZC05247.1    SSX03940.1    SSX24305.1    KZ288347    PBC27500.1    NNAY01000156    OXU30470.1    GAKP01009080    JAC49872.1    GGMR01014065    MBY26684.1    ADTU01025770    GDHF01020732    JAI31582.1    GL438334    EFN69147.1    KQ982515    KYQ55609.1    KQ976409    KYM90953.1    GL764397    EFZ17735.1    GL451314    EFN79491.1    ABLF02040023    GAMC01014093    JAB92462.1   
Pfam
PF03137   OATP        + More
PF07648   Kazal_2
Interpro
IPR004156   OATP        + More
IPR002350   Kazal_dom       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR036058   Kazal_dom_sf       
SUPFAM
SSF103473   SSF103473        + More
SSF100895   SSF100895       

Ontologies

Topology

Subcellular location
Cell membrane  
Length:
546
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
235.52062
Exp number, first 60 AAs:
21.50879
Total prob of N-in:
0.93081
POSSIBLE N-term signal
sequence
inside
1  -  25
TMhelix
26  -  48
outside
49  -  62
TMhelix
63  -  85
inside
86  -  91
TMhelix
92  -  114
outside
115  -  141
TMhelix
142  -  164
inside
165  -  176
TMhelix
177  -  196
outside
197  -  205
TMhelix
206  -  228
inside
229  -  256
TMhelix
257  -  276
outside
277  -  304
TMhelix
305  -  322
inside
323  -  334
TMhelix
335  -  357
outside
358  -  446
TMhelix
447  -  469
inside
470  -  481
TMhelix
482  -  504
outside
505  -  546
 
 

Population Genetic Test Statistics

Pi
231.230863
Theta
163.664011
Tajima's D
1.274161
CLR
0.073403
CSRT
0.729913504324784
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号