Gene

KWMTBOMO04166

Annotation

PREDICTED:_uncharacterized_protein_LOC105842971_[Bombyx_mori]

Location

Bomo_Chr7(+):12712473-12714931      View in EpiBrowser

Transcription factor

HTH

Location in the cell

Nuclear   Reliability : 3.348

CDS

ATGCCGCGTGTTTATAAACCTGATCCTAGAGGGAAAAGATATAGAAAGTACGATGAAAATATTATAAATGAAGCTGTTGCCGCATATGCGAATGGCAAATTCTCTTTAAAGGCCATAGCAGAGAAATATGATATTGATAAATCTGTACTTTATAGACACAGTGTCAAAACTATGAAAAAACAAGGAGGGCAAACTATTTTAACTAACGAGACTGAAGAATGCATGATAAAGTATATCAATATATGTGCAGAATGGGGATGCCCTTTAGATGCTTTAGATTTGAGATACATTGTTAAGACTTATCTTGACCAAGTGGGTCGGACAGTACTCAAATTTAAAAATAATTTACCAGGCCCCGACTTTGTCGCGAGTTTTCTAAAACGTCACAAAAACCAAATTTCCCAAAGATATAGCCAAAACATTAAGAAAAAAAGGGCAGAAGTTTCACCAAACTTGATTAAAGAATATTTCAAAGAGTTAGAAGTGTCATTGGCAGGTATTAATCCGAGTTCTATAATTAATTACGATGAAACTAATTTGACTGATGACCCAGGACGCAAAAAAATCATTACTAAACGAGGAACGAAGTACCCAGAGAGGGTAATGAATAGTTCAAAGTCTTCAGTTTCATTGATGATAGCCGCTACAGCTGACGGCACTTTACTCCCGCCGTATGTGGTATACAAGGCTCAAAACTTGTATAACACATGGACTGAAAATGGACCACCAGGAGCAAGGTATAATCGTACGCAATCCGGTTGGTTTGATGCAACCATTTTTGAAGATTGGATTAAATCCATCATTATACCTCACTTCAAAGATAAAGTTGGGAAAAAGTGCCTAATAGGCGATAATCTCTCGTCGCATTTATCGATTGAGACAATAAAACTGTGCCACGAACAAAATATATCGTTCATTTTTTTACCGGCAAATAGTACACACCTCACACAACCTCTTGATGTAGCATTCTTCAGGCCTATGAAGATAGCATGGCGAAACGTAGTATTGAAGTGGAAAAAAACCGATGGGAAAGCCCAATCAACGATTCCAAAGGGATGTTTTCCTAGACTTTTAAATAAATTAATGGAAGAGCTTCGTAACAACAGTAAGGCTAATATAATAGCAGGATTCCGGAAAACAGGAATATACCCGATTAATGAAGAAGAGGTTTTAAGCAGACTACCTGAAGTTCAAAACAATGAAAAGAAAACTGAAATAGAAAAATCCGTTCTAGATTTGCTCAGGGAGATGAGATATGGAACCATGAACATAACCGAACCAAAAAGGAAAAAAAAGTTGATAGTAATACCTGGACGAAGCGTTGGTTCTGAAAGTGAAGACTACATAGAAACAGAACAAGAAGAAAGCCAACAAAAACCAAAAAAGGCAGATCTGAGATCCAAAATAACACAAAACAAAGAAAATACTACAACTAATACTTACGATGGCAAAGAAAACAATAAATATAAGGGAAAAGGTGTAGGGAAAAAACTAAAACACAAGATCAGAATATTGCTGAAAAAGAAAATAAACAAGAAAACGGACCAGACACTGAAAAAATACTACTTGACGCAATAA

Protein

MPRVYKPDPRGKRYRKYDENIINEAVAAYANGKFSLKAIAEKYDIDKSVLYRHSVKTMKKQGGQTILTNETEECMIKYINICAEWGCPLDALDLRYIVKTYLDQVGRTVLKFKNNLPGPDFVASFLKRHKNQISQRYSQNIKKKRAEVSPNLIKEYFKELEVSLAGINPSSIINYDETNLTDDPGRKKIITKRGTKYPERVMNSSKSSVSLMIAATADGTLLPPYVVYKAQNLYNTWTENGPPGARYNRTQSGWFDATIFEDWIKSIIIPHFKDKVGKKCLIGDNLSSHLSIETIKLCHEQNISFIFLPANSTHLTQPLDVAFFRPMKIAWRNVVLKWKKTDGKAQSTIPKGCFPRLLNKLMEELRNNSKANIIAGFRKTGIYPINEEEVLSRLPEVQNNEKKTEIEKSVLDLLREMRYGTMNITEPKRKKKLIVIPGRSVGSESEDYIETEQEESQQKPKKADLRSKITQNKENTTTNTYDGKENNKYKGKGVGKKLKHKIRILLKKKINKKTDQTLKKYYLTQ

Uniprot

H9JBQ2   A0A2S2NMJ8   A0A3Q0J1E8   J9JX79   A0A1S4EG94   J9LWC9   + More
J9KAI8   X1WST4   A0A1B6GCB9   A0A1B6CLN0   J9K1E0   X1WTH7   J9JPC0   A0A1B6KLJ7   J9M6Q1   B0XDM0   J9KC80   A0A336M092   X1X0I1   X1XEK3   A0A1B6L0P8   X1WP22   A0A2S2R564   J9JNH9   A0A2P8Z814   J9KE52   X1WLE6   A0A1E1WU51   A0A2P8YWM9   A0A2W1BUJ3   J9K4L7   J9K6M6   A0A3S2TIP6   A0A2H8TJC7   A0A1B0GJE9   J9M3V3   J9LW80   A0A1Y1K537   A0A2A4IT23   A0A1Y1KZ51   X1XMI2   J9K5J2   J9KH76   J9L3Y1   X1WL18   J9LJP6   X1XT95   J9JJQ5   A0A1B6JFL2   B3RTS2   A0A1W7R625   A0A2H1V2L8   A0A0L7KQ98   A0A0J7KF01   A0A1B0DJ12   C3ZFC2  

Pubmed

19121390    29403074    28756777    28004739    18719581    26227816    + More
18563158   

EMBL

BABH01024482    GGMR01005791    MBY18410.1    ABLF02024787    ABLF02036293    ABLF02036295    + More
ABLF02036300    ABLF02036303    ABLF02036307    ABLF02020969    ABLF02020971    ABLF02006951    GECZ01009826    JAS59943.1    GEDC01023010    JAS14288.1    ABLF02018386    ABLF02041722    ABLF02062703    ABLF02021095    ABLF02021103    ABLF02021105    GEBQ01027923    JAT12054.1    ABLF02004276    ABLF02004277    ABLF02019754    ABLF02043119    DS232767    EDS45530.1    ABLF02031950    UFQS01000373    UFQT01000373    SSX03288.1    SSX23654.1    ABLF02003004    ABLF02053093    ABLF02064790    ABLF02014120    ABLF02031335    GEBQ01022752    JAT17225.1    ABLF02034490    GGMS01015966    MBY85169.1    ABLF02024890    PYGN01000900    PYGN01000153    PSN39546.1    PSN52644.1    ABLF02010048    ABLF02042417    GDQN01000733    JAT90321.1    PYGN01000316    PSN48625.1    KZ149957    PZC76450.1    ABLF02035413    ABLF02012638    RSAL01000111    RVE47096.1    GFXV01002448    MBW14253.1    AJWK01020237    AJWK01020238    ABLF02005267    ABLF02005269    ABLF02032408    ABLF02032409    ABLF02032413    GEZM01096654    GEZM01096605    JAV54775.1    NWSH01008222    PCG62646.1    GEZM01069098    JAV66644.1    ABLF02010036    ABLF02067222    ABLF02002783    ABLF02012639    ABLF02034252    ABLF02010037    ABLF02010039    ABLF02066755    ABLF02034492    ABLF02013132    ABLF02013134    ABLF02013135    ABLF02005217    GECU01010063    JAS97643.1    DS985244    EDV26187.1    GEHC01001021    JAV46624.1    ODYU01000374    SOQ35049.1    JTDY01007086    KOB65467.1    LBMM01008491    KMQ88832.1    AJVK01063592    GG666613    EEN48676.1   

Proteomes

UP000005204    UP000079169    UP000007819    UP000002320    UP000245037    UP000283053    + More
UP000092461    UP000218220    UP000009022    UP000037510    UP000036403    UP000092462    UP000001554   

PRIDE

H9JBQ2   

Pfam

PF03184   DDE_1        + More
PF05225   HTH_psq
PF13843   DDE_Tnp_1_7
PF05380   Peptidase_A17
PF04937   DUF659
PF07530   PRE_C2HC
PF05699   Dimer_Tnp_hAT
PF00078   RVT_1
PF03372   Exo_endo_phos
PF14529   Exo_endo_phos_2
PF03221   HTH_Tnp_Tc5
PF04500   FLYWCH

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR007889   HTH_Psq       
IPR009057   Homeobox-like_sf       
IPR029526   PGBD       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR036397   RNaseH_sf       
IPR011335   Restrct_endonuc-II-like       
IPR011604   Exonuc_phg/RecB_C       
IPR008042   Retrotrans_Pao       
IPR006600   HTH_CenpB_DNA-bd_dom       
IPR007021   DUF659       
IPR008906   HATC_C_dom       
IPR006579   Pre_C2HC_dom       
IPR000477   RT_dom       
IPR027124   Swc5/CFDP2       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR007588   Znf_FLYWCH       

SUPFAM

SSF46689   SSF46689        + More
SSF53098   SSF53098       
SSF52980   SSF52980       
SSF56219   SSF56219       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     3.90.320.10     3.60.10.10    

ProteinModelPortal

H9JBQ2   A0A2S2NMJ8   A0A3Q0J1E8   J9JX79   A0A1S4EG94   J9LWC9   + More
J9KAI8   X1WST4   A0A1B6GCB9   A0A1B6CLN0   J9K1E0   X1WTH7   J9JPC0   A0A1B6KLJ7   J9M6Q1   B0XDM0   J9KC80   A0A336M092   X1X0I1   X1XEK3   A0A1B6L0P8   X1WP22   A0A2S2R564   J9JNH9   A0A2P8Z814   J9KE52   X1WLE6   A0A1E1WU51   A0A2P8YWM9   A0A2W1BUJ3   J9K4L7   J9K6M6   A0A3S2TIP6   A0A2H8TJC7   A0A1B0GJE9   J9M3V3   J9LW80   A0A1Y1K537   A0A2A4IT23   A0A1Y1KZ51   X1XMI2   J9K5J2   J9KH76   J9L3Y1   X1WL18   J9LJP6   X1XT95   J9JJQ5   A0A1B6JFL2   B3RTS2   A0A1W7R625   A0A2H1V2L8   A0A0L7KQ98   A0A0J7KF01   A0A1B0DJ12   C3ZFC2  

KEGG

101746451    no KO assigned | (RefSeq) uncharacterized LOC101746451

GO

GO:0003676   GO:0003677   GO:0005634   GO:0015074   GO:0016021   GO:0046983   GO:0008270   GO:0005230   GO:0006810   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

PANTHER

PTHR23227  

Subcellular location

Nucleus  

Length:

525

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05841

Exp number, first 60 AAs:

0.01874

Total prob of N-in:

0.00575

outside

1  -  525

 

 

Pi

195.353978

Theta

180.262279

Tajima's D

0.287348

CLR

0.315766

CSRT

0.444477776111194

Interpretation

Uncertain