Gene

KWMTBOMO04165

Pre Gene Modal

BGIBMGA008671

Annotation

PREDICTED:_cyclin-H_[Amyelois_transitella]

Location

Bomo_Chr7(-):12701479-12702572      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.2

CDS

ATGTTTTCTACCAGCTCTCAAAGAAAATTTTGGACGTTCAGTGATGAAAATGAACTCGCACGCTTACGTGAAAAACACAATTATTTTTTTTACGCGAGACAGAACTCGCACATCGACGAGCAACAACGTTTCACGTATTTCTTGTCTCCTGATGAAGAACGACAACTTTTAAAGCAATACGAACTCCATCTGAAAGAATTCTGCAAGAGATTCACACCTCCAATGCCCAAAGGGGTGGTGGGCACAGCCTTTCATTACTTTAAACGATTTTATCTATACAACTCGACAATGGACTATCATCCAAAAGAAATTTTAGCCACTTGCGTGTATTTAGCGTGTAAAGTTGAAGAATTTAACGTTTCTATCGGGCAATTCGTCGCCAATATCAAAGGAGATCGAGAAAAAGCATCAGATATAATACTAAACAATGAATTATTGCTAATGCAACAATTAAACTACCATTTGACCATACATAATCCTTTCAGACCAGTAGAAGGATTCCTAATAGACATTAAAACTAGATGTTCATTGGCTAATCCTGAACGTCTTCGTAGTGGTATTGATGAGTTCCTAGAAAAGGTGTTCTTAACTGATGCATGCTTGTTGTATGCTCCGTCACAAATTGCTTTAGCTGCAGTACTCCATGCAGCGAGCAAGGAACAAGAGAACTTGGATAGCTACGTGACAGACATACTCTTCAGAGATGCGGGACGTGATAAATTGGCGATACTTATTGAAGCTGTAAGAAAGATTCGATCATTAGTAAAAATGGTAGAGGCACCAGCTAGAGAACGAGTACGGCTTATAGAGAAGAAATTAGACAAATGTCGGAACCAAGAAAATAACCCTGACAGTGAGATTTACAAGCGTCGGATGAGAGAGCTGCTAGACGAAGACGATGTTTTACATGTAGGATCCAGTAGAATGTCTTTAGATACAAGTGGAGTTACACAAGTTCTATCACCTTCTGCCTCTTAA

Protein

MFSTSSQRKFWTFSDENELARLREKHNYFFYARQNSHIDEQQRFTYFLSPDEERQLLKQYELHLKEFCKRFTPPMPKGVVGTAFHYFKRFYLYNSTMDYHPKEILATCVYLACKVEEFNVSIGQFVANIKGDREKASDIILNNELLLMQQLNYHLTIHNPFRPVEGFLIDIKTRCSLANPERLRSGIDEFLEKVFLTDACLLYAPSQIALAAVLHAASKEQENLDSYVTDILFRDAGRDKLAILIEAVRKIRSLVKMVEAPARERVRLIEKKLDKCRNQENNPDSEIYKRRMRELLDEDDVLHVGSSRMSLDTSGVTQVLSPSAS

Similarity

Belongs to the cyclin family.
Belongs to the AKH/HRTH/RPCH family.

Uniprot

H9JGM4   A0A2H1WI10   A0A2W1BQZ3   A0A2A4JQZ1   A0A194PWA2   A0A0L7KWS8   + More
S4PMU2   A0A3S2PIR6   A0A212FKR7   A0A1E1VYT2   A0A194RDG2   Q16JQ2   A0A182UXN1   A0A182L0E9   Q7Q4I7   A0A182IC32   A0A182GYI0   A0A182UFH5   A0A2M4BTG6   A0A2M4BTE8   A0A182XFU7   A0A182K6S6   W5J9W4   A0A182SFC9   A0A182WHC3   A0A182Y9Y1   A0A182RG34   A0A182NET9   A0A182F5K1   A0A182PAP1   A0A182QFH8   A0A182IJV9   W8AQE1   A0A034WGT5   B0WCS0   A0A1Q3F1P6   A0A182M243   A0A336MBU1   U5EZI0   A0A336MAL8   A0A084VMA4   A0A0A1WNN0   A0A0K8TL95   A0A0K8UW44   A0A2P8XMK8   A0A1I8MZY5   A0A0J7LA15   A0A3L8DIR2   D3TRT0   A0A1B0G766   A0A1A9ZXB0   F4X0Q1   A0A158NCY3   E9IJX2   A0A195F817   A0A154P750   A0A151WYF4   A0A195D1R5   A0A0N0BEY2   A0A2J7Q483   A0A151J3D1   E2ASF4   A0A087ZN02   A0A067QJI2   A0A1A9UQ25   A0A0L7R4B0   A0A1Y1LP72   A0A0L0CF97   E2BY23   A0A1A9YB41   A0A2A3EIF7   A0A1W4WY47   A0A1B0DB14   K7IUX2   Q2M0B7   B3MAT4   B4LCT9   A0A3B0JTX4   A0A232EZX0   A0A1W4USX4   B4KUV3   A0A0C9QHN8   B4MM61   N6TWG3   U4UCW3   B4IAW2   B4GRV0   B4ITC1   B4IZ94   B4QKN5   D6WRD7   B3NJ00   O76513   C6SV35   Q32KG2   O17144   A0A1A9WQR9   A0A1L8DWS4   A0A1B6LS70   A0A1S4ESS3  

Pubmed

19121390    28756777    26354079    26227816    23622113    22118469    + More
17510324    20966253    12364791    14747013    17210077    26483478    20920257    23761445    25244985    24495485    25348373    24438588    25830018    26369729    29403074    25315136    30249741    20353571    21719571    21347285    21282665    20798317    24845553    28004739    26108605    20075255    15632085    17994087    28648823    23537049    17550304    22936249    18362917    19820115    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01034378    ODYU01008799    SOQ52710.1    KZ149929    PZC77448.1    NWSH01000785    + More
PCG74229.1    KQ459589    KPI97656.1    JTDY01004984    KOB67509.1    GAIX01003380    JAA89180.1    RSAL01000020    RVE52576.1    AGBW02007996    OWR54334.1    GDQN01011169    JAT79885.1    KQ460367    KPJ15504.1    CH477997    EAT34507.1    EAT34510.1    AAAB01008964    EAA12839.3    APCN01000774    JXUM01097524    KQ564351    KXJ72389.1    GGFJ01007226    MBW56367.1    GGFJ01007225    MBW56366.1    ADMH02001866    ETN60786.1    AXCN02000840    GAMC01015547    GAMC01015546    GAMC01015545    JAB91010.1    GAKP01004186    JAC54766.1    DS231890    EDS43796.1    GFDL01013565    JAV21480.1    AXCM01000185    UFQT01000883    SSX27832.1    GANO01000759    JAB59112.1    UFQT01000673    SSX26371.1    ATLV01014583    KE524975    KFB39098.1    GBXI01014177    JAD00115.1    GDAI01002514    JAI15089.1    GDHF01021417    JAI30897.1    PYGN01001714    PSN33237.1    LBMM01000086    KMR05021.1    QOIP01000007    RLU20092.1    EZ424132    ADD20408.1    CCAG010003788    GL888498    EGI60043.1    ADTU01012061    GL763883    EFZ19121.1    KQ981744    KYN36332.1    KQ434822    KZC07164.1    KQ982650    KYQ52918.1    KQ977012    KYN06344.1    KQ435818    KOX72538.1    NEVH01018389    PNF23393.1    KQ980278    KYN16966.1    GL442298    EFN63620.1    KK853272    KDR09129.1    KQ414661    KOC65591.1    GEZM01054792    JAV73396.1    JRES01000487    KNC30867.1    GL451412    EFN79396.1    KZ288242    PBC31254.1    AJVK01000607    AAZX01005683    CH379069    EAL31018.1    CH902618    EDV39168.1    CH940647    EDW70981.1    OUUW01000002    SPP76161.1    NNAY01001480    OXU23820.1    CH933809    EDW19359.1    GBYB01000082    GBYB01000409    JAG69849.1    JAG70176.1    CH963847    EDW73070.1    APGK01052181    KB741211    ENN72736.1    KB632263    ERL90872.1    CH480826    EDW44425.1    CH479188    EDW40485.1    CM000159    CH891688    EDW94965.1    EDW99634.1    CH916366    EDV96649.1    CM000363    CM002912    EDX11450.1    KMZ01101.1    KQ971351    EFA06469.1    CH954178    EDV52717.1    AF074334    AE014296    AAC26868.1    AAF51784.1    BT089027    ACU00260.1    BT023917    ABB36421.1    AF024618    AAB82275.1    GFDF01003206    JAV10878.1    GEBQ01013454    JAT26523.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000037510    UP000283053    UP000007151    + More
UP000053240    UP000008820    UP000075903    UP000075882    UP000007062    UP000075840    UP000069940    UP000249989    UP000075902    UP000076407    UP000075881    UP000000673    UP000075901    UP000075920    UP000076408    UP000075900    UP000075884    UP000069272    UP000075885    UP000075886    UP000075880    UP000002320    UP000075883    UP000030765    UP000245037    UP000095301    UP000036403    UP000279307    UP000092444    UP000092445    UP000007755    UP000005205    UP000078541    UP000076502    UP000075809    UP000078542    UP000053105    UP000235965    UP000078492    UP000000311    UP000005203    UP000027135    UP000078200    UP000053825    UP000037069    UP000008237    UP000092443    UP000242457    UP000192223    UP000092462    UP000002358    UP000001819    UP000007801    UP000008792    UP000268350    UP000215335    UP000192221    UP000009192    UP000007798    UP000019118    UP000030742    UP000001292    UP000008744    UP000002282    UP000001070    UP000000304    UP000007266    UP000008711    UP000000803    UP000091820    UP000079169   

PRIDE

H9JGM4    O76513    C6SV35    Q32KG2    O17144   

Pfam

PF16899   Cyclin_C_2        + More
PF00134   Cyclin_N

Interpro

IPR027081   CyclinH/Ccl1        + More
IPR006671   Cyclin_N       
IPR031658   Cyclin_C_2       
IPR013763   Cyclin-like       
IPR036915   Cyclin-like_sf       
IPR002047   Adipokinetic_hormone_CS       

SUPFAM

SSF47954   SSF47954       

CDD

cd00043  CYCLIN

ProteinModelPortal

H9JGM4   A0A2H1WI10   A0A2W1BQZ3   A0A2A4JQZ1   A0A194PWA2   A0A0L7KWS8   + More
S4PMU2   A0A3S2PIR6   A0A212FKR7   A0A1E1VYT2   A0A194RDG2   Q16JQ2   A0A182UXN1   A0A182L0E9   Q7Q4I7   A0A182IC32   A0A182GYI0   A0A182UFH5   A0A2M4BTG6   A0A2M4BTE8   A0A182XFU7   A0A182K6S6   W5J9W4   A0A182SFC9   A0A182WHC3   A0A182Y9Y1   A0A182RG34   A0A182NET9   A0A182F5K1   A0A182PAP1   A0A182QFH8   A0A182IJV9   W8AQE1   A0A034WGT5   B0WCS0   A0A1Q3F1P6   A0A182M243   A0A336MBU1   U5EZI0   A0A336MAL8   A0A084VMA4   A0A0A1WNN0   A0A0K8TL95   A0A0K8UW44   A0A2P8XMK8   A0A1I8MZY5   A0A0J7LA15   A0A3L8DIR2   D3TRT0   A0A1B0G766   A0A1A9ZXB0   F4X0Q1   A0A158NCY3   E9IJX2   A0A195F817   A0A154P750   A0A151WYF4   A0A195D1R5   A0A0N0BEY2   A0A2J7Q483   A0A151J3D1   E2ASF4   A0A087ZN02   A0A067QJI2   A0A1A9UQ25   A0A0L7R4B0   A0A1Y1LP72   A0A0L0CF97   E2BY23   A0A1A9YB41   A0A2A3EIF7   A0A1W4WY47   A0A1B0DB14   K7IUX2   Q2M0B7   B3MAT4   B4LCT9   A0A3B0JTX4   A0A232EZX0   A0A1W4USX4   B4KUV3   A0A0C9QHN8   B4MM61   N6TWG3   U4UCW3   B4IAW2   B4GRV0   B4ITC1   B4IZ94   B4QKN5   D6WRD7   B3NJ00   O76513   C6SV35   Q32KG2   O17144   A0A1A9WQR9   A0A1L8DWS4   A0A1B6LS70   A0A1S4ESS3  

PDB

1JKW     E-value=8.90049e-64,     Score=617

KEGG

101744462    K06634 cyclin H | (RefSeq) cyclin-H

PATHWAY

03022    Basal transcription factors - Bombyx mori (domestic silkworm)
03420    Nucleotide excision repair - Bombyx mori (domestic silkworm)

GO

GO:0006351   GO:0016538   GO:0070985   GO:0005576   GO:0005179   GO:0006468   GO:0000079   GO:0005634   GO:0006357   GO:0005675   GO:0016301   GO:0004693   GO:0008353   GO:0006366   GO:0016740   GO:0006367   GO:0032806   GO:0005230   GO:0006810   GO:0016021   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

Subcellular location

Secreted  

Length:

325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04695

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02468

outside

1  -  325

 

 

Pi

240.866549

Theta

220.913634

Tajima's D

0.110126

CLR

6.886665

CSRT

0.401829908504575

Interpretation

Uncertain