Gene

KWMTBOMO04157  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008675

Annotation

PREDICTED:_probable_28S_ribosomal_protein_S26?_mitochondrial_[Papilio_polytes]

Location

Bomo_Chr7(-):12579788-12581372      View in EpiBrowser

Full name

Probable 28S ribosomal protein S26, mitochondrial      

Location in the cell

Nuclear   Reliability : 2.381

CDS

ATGTTCTCTCAAAGCTCTTACCTCAAACGAACGATACCCTTATTTATACAAACTGCCGGCGCCCATAGGAAGCCGAGATGGTTACCCGTAGCAAAAAGCAAGGTCTACCGTATACCAAAGCGGCCAACGACCTCCGAAGAAGAGCGAGTAGAGCTTCTGCGCCTCCACAACAATTACAAGACACAGATGAGGGCAATTCGGCGTTTCTACCACGAAGATATGATTAAGGAAAAATCCACAAAAGACAGTGCTAGTTCCGAAATGTCTCAACAGCTGGAGGCCGACGAATGGGCTCGATGCTTTGAGTTGAACGAGAAGTGGAACGCGGAGATATCTGCAGCACGAGAGGAACGGAGAAAATTGGAGATTGCGAAACTAGAGGAATACACATTGGCCAGAATGGAGGCCAAGGACAAAGAACTACAAATAAAAATTAAAAAGGCTTCAGAAAAAATTAGGGAACAGAAGGAATTATCCAAAACATTCATCACACCTGAAAATTTGGATGAAGCCATAGACTTAGCTATAGCAAATCCTACTGATTATAATTACGCTATCGACATGAAGGGAATGAAGTTTGAAGGGCGAGACACTATTATATCATATCCTAAAGAAGATAAAAATGTAGCGGCAAATTAA

Protein

MFSQSSYLKRTIPLFIQTAGAHRKPRWLPVAKSKVYRIPKRPTTSEEERVELLRLHNNYKTQMRAIRRFYHEDMIKEKSTKDSASSEMSQQLEADEWARCFELNEKWNAEISAAREERRKLEIAKLEEYTLARMEAKDKELQIKIKKASEKIREQKELSKTFITPENLDEAIDLAIANPTDYNYAIDMKGMKFEGRDTIISYPKEDKNVAAN

Subunit

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

Similarity

Belongs to the mitochondrion-specific ribosomal protein mS26 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  Probable 28S ribosomal protein S26, mitochondrial

Uniprot

H9JGM8   A0A194PXC1   A0A194RDI0   A0A3S2LFE9   A0A2A4JRW9   A0A212FPN0   + More
A0A2H1W7C9   A0A1E1WHP4   A0A2W1BQZ9   A0A0L7L6Q0   B4LHW5   A0A0M4EBU3   A0A1A9V554   A0A1W4VRW4   A0A1I8PMS7   A0A1L8ECS9   A0A1L8ECI6   B4N475   A0A1A9ZWG2   A0A1A9X0Z4   A0A0K8UK45   A0A1I8NCY8   B4L037   D3TRB7   A0A1A9YCL1   A0A1B0AQM7   B4IFP9   A0A034VAJ9   A0A034VBP7   A0A0J9RXN0   B4J0N5   B4PJ48   W8C639   B3M3K3   N6T4Z3   J3JYA2   A0A2J7RH80   A0A067QYR2   D6WLW4   A0A0T6AVP5   A0A023F743   B4GZU1   Q2LZ06   A0A1W4XTN2   A0A3B0JUK2   Q9VVN2   B3ND97   A0A0V0GAV4   A0A2P8Z0M9   A0A182JD39   B0WKP0   A0A336LUY8   Q16XP5   A0A182GAP9   A0A1Q3F5N6   A0A3R7M8E1   A0A023EJY4   A0A023EJS3   A0A1B0CUT1   A0A1B6L7S0   A0A084VRH4   A0A1Y1NB14   A0A2R7X2G8   A0A1S4FKF2   A0A182FQV5   A0A182JWD5   A0A1B6G7M1   A0A2M4AVJ2   A0A2M4BZK0   A0A1J1ISG0   A0A1Y1NB16   T1DQ65   K7IV74   A0A2M3ZJE5   A0A2M3ZJK3   R4FKJ0   A0A182W3E7   A0A2Y9D326   A0A182SH54   A0A182RZL2   A0A182PP90   W5JD37   C4WSV9   A0A1B6IRT2   A0A182Q7C4   A0A182Y8T7   A7UT36   A0A182NSF4   A0A182MQC8   A0A2Y9D0S5   A0A2Y9D3G2   A0A1L8E7Y2   J9KAI1   A0A1L8DS22   E2A8L8   A0A0M8ZXY9   A0A146LPD5   A0A1L8DRY4   A0A0P4VKY6   A0A0A9WQI3  

Pubmed

19121390    26354079    22118469    28756777    26227816    17994087    + More
25315136    20353571    25348373    22936249    17550304    24495485    23537049    22516182    24845553    18362917    19820115    25474469    15632085    10731132    12537572    12537569    29403074    17510324    26483478    24945155    24438588    28004739    20075255    20920257    23761445    25244985    12364791    14747013    17210077    20798317    26823975    27129103    25401762   

EMBL

BABH01034370    KQ459589    KPI97668.1    KQ460367    KPJ15519.1    RSAL01000020    + More
RVE52583.1    NWSH01000785    PCG74213.1    AGBW02002137    OWR55665.1    ODYU01006674    SOQ48732.1    GDQN01004521    JAT86533.1    KZ149929    PZC77458.1    JTDY01002598    KOB71132.1    CH940647    EDW70690.1    CP012525    ALC45004.1    GFDG01002364    JAV16435.1    GFDG01002359    JAV16440.1    CH964095    EDW78949.2    GDHF01025416    JAI26898.1    CH933809    EDW19072.1    CCAG010007514    EZ423969    ADD20245.1    JXJN01001971    CH480834    EDW46486.1    GAKP01019408    JAC39544.1    GAKP01019411    GAKP01019410    JAC39542.1    CM002912    KMZ00368.1    CH916366    EDV97890.1    CM000159    EDW94639.1    GAMC01008727    GAMC01008726    JAB97829.1    CH902618    EDV39264.1    APGK01052414    KB741212    KB632279    ENN72708.1    ERL91292.1    BT128226    AEE63187.1    NEVH01003746    PNF40196.1    KK853097    KDR11429.1    KQ971343    EFA03392.1    LJIG01022725    KRT79044.1    GBBI01001660    JAC17052.1    CH479199    EDW29518.1    CH379069    EAL29703.1    OUUW01000002    SPP77036.1    AE014296    AY071284    CH954178    EDV51890.1    GECL01000858    JAP05266.1    PYGN01000254    PSN50038.1    DS231974    EDS29971.1    UFQS01000211    UFQT01000211    SSX01365.1    SSX21745.1    CH477534    EAT39397.1    JXUM01009125    KQ560276    KXJ83360.1    GFDL01012164    JAV22881.1    QCYY01002509    ROT69869.1    GAPW01004177    JAC09421.1    GAPW01004277    JAC09321.1    AJWK01029637    GEBQ01020271    JAT19706.1    ATLV01015669    KE525026    KFB40568.1    GEZM01007526    JAV95112.1    KK856522    PTY25956.1    GECZ01030760    GECZ01011342    JAS39009.1    JAS58427.1    GGFK01011486    MBW44807.1    GGFJ01009301    MBW58442.1    CVRI01000057    CRL02046.1    GEZM01007525    JAV95114.1    GAMD01001350    JAB00241.1    AAZX01001201    GGFM01007903    MBW28654.1    GGFM01007889    MBW28640.1    ACPB03012017    GAHY01001828    JAA75682.1    ADMH02001863    ETN60810.1    AK340354    BAH70979.1    GECU01018077    JAS89629.1    AXCN02000237    AAAB01008898    EDO64142.2    AXCM01001070    APCN01005389    GFDG01003962    JAV14837.1    ABLF02040799    GFDF01004845    JAV09239.1    GL437652    EFN70205.1    KQ435821    KOX72346.1    GDHC01010023    JAQ08606.1    GFDF01004836    JAV09248.1    GDKW01003410    JAI53185.1    GBHO01034841    JAG08763.1   

Proteomes

UP000005204    UP000053268    UP000053240    UP000283053    UP000218220    UP000007151    + More
UP000037510    UP000008792    UP000092553    UP000078200    UP000192221    UP000095300    UP000007798    UP000092445    UP000091820    UP000095301    UP000009192    UP000092444    UP000092443    UP000092460    UP000001292    UP000001070    UP000002282    UP000007801    UP000019118    UP000030742    UP000235965    UP000027135    UP000007266    UP000008744    UP000001819    UP000192223    UP000268350    UP000000803    UP000008711    UP000245037    UP000075880    UP000002320    UP000008820    UP000069940    UP000249989    UP000283509    UP000092461    UP000030765    UP000069272    UP000075881    UP000183832    UP000002358    UP000015103    UP000075920    UP000075903    UP000075901    UP000075900    UP000075885    UP000000673    UP000075886    UP000076408    UP000007062    UP000075884    UP000075883    UP000075840    UP000076407    UP000007819    UP000000311    UP000053105   

PRIDE

H9JGM8    Q9VVN2   

Pfam

PF14943   MRP-S26

Interpro

IPR026140   MRPS26       

ProteinModelPortal

H9JGM8   A0A194PXC1   A0A194RDI0   A0A3S2LFE9   A0A2A4JRW9   A0A212FPN0   + More
A0A2H1W7C9   A0A1E1WHP4   A0A2W1BQZ9   A0A0L7L6Q0   B4LHW5   A0A0M4EBU3   A0A1A9V554   A0A1W4VRW4   A0A1I8PMS7   A0A1L8ECS9   A0A1L8ECI6   B4N475   A0A1A9ZWG2   A0A1A9X0Z4   A0A0K8UK45   A0A1I8NCY8   B4L037   D3TRB7   A0A1A9YCL1   A0A1B0AQM7   B4IFP9   A0A034VAJ9   A0A034VBP7   A0A0J9RXN0   B4J0N5   B4PJ48   W8C639   B3M3K3   N6T4Z3   J3JYA2   A0A2J7RH80   A0A067QYR2   D6WLW4   A0A0T6AVP5   A0A023F743   B4GZU1   Q2LZ06   A0A1W4XTN2   A0A3B0JUK2   Q9VVN2   B3ND97   A0A0V0GAV4   A0A2P8Z0M9   A0A182JD39   B0WKP0   A0A336LUY8   Q16XP5   A0A182GAP9   A0A1Q3F5N6   A0A3R7M8E1   A0A023EJY4   A0A023EJS3   A0A1B0CUT1   A0A1B6L7S0   A0A084VRH4   A0A1Y1NB14   A0A2R7X2G8   A0A1S4FKF2   A0A182FQV5   A0A182JWD5   A0A1B6G7M1   A0A2M4AVJ2   A0A2M4BZK0   A0A1J1ISG0   A0A1Y1NB16   T1DQ65   K7IV74   A0A2M3ZJE5   A0A2M3ZJK3   R4FKJ0   A0A182W3E7   A0A2Y9D326   A0A182SH54   A0A182RZL2   A0A182PP90   W5JD37   C4WSV9   A0A1B6IRT2   A0A182Q7C4   A0A182Y8T7   A7UT36   A0A182NSF4   A0A182MQC8   A0A2Y9D0S5   A0A2Y9D3G2   A0A1L8E7Y2   J9KAI1   A0A1L8DS22   E2A8L8   A0A0M8ZXY9   A0A146LPD5   A0A1L8DRY4   A0A0P4VKY6   A0A0A9WQI3  

PDB

6GAZ     E-value=3.54353e-08,     Score=135

KEGG

101744077    K17405 small subunit ribosomal protein S26 | (RefSeq) probable 28S ribosomal protein S26, mitochondr

GO

GO:0005763   GO:0005739   GO:0032543   GO:0006412   GO:0003735   GO:0005840   GO:0016021   GO:0003899   GO:0005666   GO:0006383   GO:0006508   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

PANTHER

PTHR21035  

Subcellular location

Mitochondrion  

Length:

212

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00016

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.09314

outside

1  -  212

 

 

Pi

242.87802

Theta

174.269022

Tajima's D

0.940326

CLR

0.193201

CSRT

0.64336783160842

Interpretation

Uncertain