SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04149  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008715
Annotation
Uncharacterized_protein_OBRU01_13078_[Operophtera_brumata]
Location in the cell
Extracellular   Reliability : 2.249
 

Sequence

CDS
ATGTCCAGGGAAGCTAACAATATGATGGAAGCTTACCTAAAAAATGGTAAGTTTGTGTTGTTGCTCCTGTACGGGTACCATAAGTCGTCGCAAATCACCAGACGCGTCTTCAGAGCCACGTGCATCGCATACATGGAGTATAACGGTCTCGCATTACCGATGCTCTTCGAGAAAGTATCTGAACTCTACGCCGTGCCCAAGGACAGACTCTGGGAGATGATGAGCGAGACAAAGCAAGTGAACTCCTTGCAAGCGCTGTTCACAATAGCCGACTATTATTACACAGTATACGAAGCAGGTAATACGAAAACGTTTGAATTGTTTCCGTTTTGTCGTGTCTATGGACAGATGTACCACTCCAATATGAGTGGAAAATGTGAAGAAAATTACGAAGCCTGCTATGCCCTAGCTTTGCTGGTAGACAAGAAGCTGGGCATGGAAAAATCTTTTATGAGGAATTCTGCTTGGACTAAACAATTTTCTTGTGTTTGGCAAAATAAAGGAGCCGCGATTGCAACAGAAGTGTATAAGAAGATCATGGAACAAAACGTCTGA
Protein
MSREANNMMEAYLKNGKFVLLLLYGYHKSSQITRRVFRATCIAYMEYNGLALPMLFEKVSELYAVPKDRLWEMMSETKQVNSLQALFTIADYYYTVYEAGNTKTFELFPFCRVYGQMYHSNMSGKCEENYEACYALALLVDKKLGMEKSFMRNSAWTKQFSCVWQNKGAAIATEVYKKIMEQNV

Summary

Pfam
PF03216   Rhabdo_ncap_2
Interpro
IPR004902   Rhabdo_ncap_2       

Ontologies

GO

Topology

Length:
184
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.75457
Exp number, first 60 AAs:
0.65229
Total prob of N-in:
0.28964
outside
1  -  184
 
 

Population Genetic Test Statistics

Pi
107.883745
Theta
116.084108
Tajima's D
-0.180374
CLR
178.960594
CSRT
0.314884255787211
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号