SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04146
Pre Gene Modal
BGIBMGA008681
Annotation
PREDICTED:_regulator_of_G-protein_signaling_loco_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.818
 

Sequence

CDS
ATGAAGTTCGACAGTTACCCTCGCTTCCTGCGCTCCGCCCAGCACGCCGAGTGCGCGCGCGCCGAGCTGCGCGGCCTGCCGCCCCCCTACCCCCCGCAGCACGGCAAGTTGAAGAAGTCTGCCAGTAACGCATCAGAGCGCCGCCGCAGCGGTGGGGCCTCCCTCCTCCCGTGGAGACGGCCCGCCTCCAAGGATAGAGGGGAGCCGAACAACTCACAGGGTAACGGCGATGCGGTGAGGTCCAACCAACCAGCCGTGAGCCAAAGCTCGTTGTGCCGCGTGATCCTCCCAGACGGGGCCACCTCGGTGGTGCCCGTGGACCCAGACGTCTCCGTGGGCAGGATCGTGGACAGGCTGCTGCAAAAGAGGAACCTGCTCTGTCCCAACTACGATGTGTTCGTTGAAGATCAGGACGCGGTGCGGCCCGTGGACCGCTCGGCGCCGTCCGTGTGCGTGGGCGGCGCGGCGGCGCGCGTGGAGCGGCGGTGCTGCGTGTGGGTGCGCGCGGGGGGGCGCACGCTCGCGCTGCGCTGCCCGCCCTCCCGCACCCTGGCGCACGCCCTGCCGCCCCTGCTGCGCCGCGCCCTGCCCCGCGCGCCCCCCGCCCCCGCCCCCGCCGCCGCCGTGCTGCTGGACGGCCGCCCCGTGCACCCCGACACGCTCATGCAGGATCTGGACGGAGCTCGCCTGCAGATCGTGGAGGTGGAGGAGGCAGGCGTGGAGGAGGAGCAGGGCGGCCCGGCGCCGCGCCTGCAGGACGACGACACCCAGAGCACCGACGCCTGCAGCGGCCGGGAGGGCGGAGGCCGGGTGCGCGCGGCGCTGCGCCCCGGGGCCGCACTGCACCACCACCCGCCAGATTTCTTGGAAAACCTCAGAGAGACGCAGCGGCAGAGGTTACAAAGCAAGCCGGATGATCCCCCCTGGCCCCCCGCAGCCCCCACCCCTGCCCCCCAAGCCTGCTCACAGAGCCCCCACCCTCGTCTGAACGGACACCGCTCGACTCTTGGATTCTATTACGCACGGGCGACCCGCCACCGGCTGGAGCCAGGGTCGACCGCCCGCTGTGATGCTAGTCACGGAGGACACCCCGGGGAGCACTCGAGTTACTCCCAACCTCCGCTAGTCCCACACGCGTTCCTCTAA
Protein
MKFDSYPRFLRSAQHAECARAELRGLPPPYPPQHGKLKKSASNASERRRSGGASLLPWRRPASKDRGEPNNSQGNGDAVRSNQPAVSQSSLCRVILPDGATSVVPVDPDVSVGRIVDRLLQKRNLLCPNYDVFVEDQDAVRPVDRSAPSVCVGGAAARVERRCCVWVRAGGRTLALRCPPSRTLAHALPPLLRRALPRAPPAPAPAAAVLLDGRPVHPDTLMQDLDGARLQIVEVEEAGVEEEQGGPAPRLQDDDTQSTDACSGREGGGRVRAALRPGAALHHHPPDFLENLRETQRQRLQSKPDDPPWPPAAPTPAPQACSQSPHPRLNGHRSTLGFYYARATRHRLEPGSTARCDASHGGHPGEHSSYSQPPLVPHAFL

Summary

Pfam
PF02196   RBD        + More
PF00615   RGS
Interpro
IPR036305   RGS_sf        + More
IPR003116   RBD_dom       
IPR029071   Ubiquitin-like_domsf       
IPR016137   RGS       
IPR024066   RGS_subdom1/3       
SUPFAM
SSF48097   SSF48097        + More
SSF54236   SSF54236       
Gene 3D

Ontologies

Topology

Length:
381
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00389
outside
1  -  381
 
 

Population Genetic Test Statistics

Pi
331.330236
Theta
192.373561
Tajima's D
1.801501
CLR
0
CSRT
0.850607469626519
Interpretation
Uncertain
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