Gene

KWMTBOMO04145  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA008714

Annotation

PREDICTED:_probable_39S_ribosomal_protein_L45?_mitochondrial_isoform_X1_[Amyelois_transitella]

Location

Bomo_Chr7(+):12411788-12414430      View in EpiBrowser

Full name

Probable 39S ribosomal protein L45, mitochondrial      

Location in the cell

Mitochondrial   Reliability : 3.169

CDS

ATGGCTAACTCAGTACTATTAAAGTTTTCCGCCTTAAGGTTAACCCCTGCATTGATGTGCAATCAGCAATCTCGCACAACCACAACGAAACATCATAACCCGAAGTTTAAAAAGGAACGTGCTCAGAAATTCCTTAAGATAGACCTTCCAGATTTTAATGAAGACCACACGTCTTATCCACCACATAAACTGCGGCAGAAGATGAAGGAGAAGGGTGTTTTGCCACCAAGACCGTGGATGGAGCGTCCATTCTATATATCTGCTACAGGTGGAGTCTTTGAAGCATATGTCCCACCAGAAGGCGACGGTAAAGCCTCTATAGTATCAACTTCACGTGCCAAACAAACAGTAGAGCTTTTAGAAAAGAAATCAAAATCAATGATGGCAATACGTAAGATTAAATCGTTTGATGAAGATTATGACTCCAAAAAATTCATCTCACATGCTCAGGATATTTACATAAAAGCTCACGAAAGCTTGGTGAATAACGATAAGAGAGCATTGAGATTATATGTAACAGAGAAAGCTTATTCTGAGTTTAGACACAACAGTCACTTGAAGACAATCAGATGGAAGTTCCTTGAGTCATTGGAACCTCCGAGGGTGGTACATGCGCGATGCACAGATGTTATCAGTAAAGAGAACATATTTGGGCAGGTGACGGTCCGGTTCCACACGCGCCAGCAGCTGGCCGTGTACGATCGCTTCGGCCGCCTTATCCACGGCAGCGAGATCCTGGCCAAAGACGTCCTGGAGTACATAGTCTTCGAGAAGCACCTCTCCAACCTGTACGGCACTTGGAGAGTGCACGAAAAGATCATCCCGGACTGGGCGCCGCCTAAGGAGCCCTCGAAGCTGACGAGGGTCATGCCCGACCCGGAGCCCGAAGGCCCGCCGCCCGATACAGTAGCAGAAGCGCCCGAGCCGCCGGCCATTGAAGCGAAGTAG

Protein

MANSVLLKFSALRLTPALMCNQQSRTTTTKHHNPKFKKERAQKFLKIDLPDFNEDHTSYPPHKLRQKMKEKGVLPPRPWMERPFYISATGGVFEAYVPPEGDGKASIVSTSRAKQTVELLEKKSKSMMAIRKIKSFDEDYDSKKFISHAQDIYIKAHESLVNNDKRALRLYVTEKAYSEFRHNSHLKTIRWKFLESLEPPRVVHARCTDVISKENIFGQVTVRFHTRQQLAVYDRFGRLIHGSEILAKDVLEYIVFEKHLSNLYGTWRVHEKIIPDWAPPKEPSKLTRVMPDPEPEGPPPDTVAEAPEPPAIEAK

Similarity

Belongs to the mitochondrion-specific ribosomal protein mL45 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  Probable 39S ribosomal protein L45, mitochondrial

Uniprot

H9JGR7   A0A2H1W6P1   A0A2A4JWF0   A0A1E1WBG4   A0A2W1BXQ4   A0A0L7LES8   + More
A0A194RD36   A0A0N1I4R6   U5EUX9   A0A1I8MI39   T1PIS2   Q16NB4   A0A182GUW0   A0A023EQW1   A0A023ENU9   A0A0M4EF17   A0A0K8WLE0   A0A034V1F7   A0A1A9YHS8   A0A1B0C2Y6   B3M013   A0A2M4AKK5   W8BM91   A0A182FKX8   A0A0L0C3B9   A0A182R3L6   A0A182IU87   A0A182NA60   Q29BD6   A0A182J3U5   A0A084VSE2   B4GNT3   A0A1Q3F8B1   B4NAU7   W5JLM5   A0A3B0K6X5   A0A2M3Z773   A0A182UIU0   A0A182K6W5   A0A182V980   A0A2M3Z7F7   A0A182P715   A0A2M4BTA7   A0A2M4BUY3   A0A182XI72   A0A182LF96   A0A182HT59   A0A2M4BTI5   Q9VCX3   Q7QC22   A0A1W4UCH8   A0A182QK80   B3P8M1   B4HER0   A0A2J7QPD6   A0A1A9WJ28   A0A182YKF8   A0A182VX78   B0WK91   A0A182M903   A0A067RIW5   A0A1I8Q110   A0A1W4X7Q7   B4JSI5   B4K7N9   A0A1B0AJ72   B4PMC8   B4M419   A0A0T6B9Q0   D3TMH3   A0A336K027   A0A1A9UWE5   A0A0A9YZ89   A0A0A9YXR4   A0A0P4VNX7   A0A146MF46   A0A0V0G7Y2   D6WPU1   A0A0P4W317   A0A1J1IJ52   A0A1Y1MPL0   A0A1L8DRK5   A0A1B0DHF6   J7HY95   A0A0P6CY01   A0A0N8B031   A0A0P6DD24   A0A0P5RB20   A0A0P5CJR4   A0A0P6DJ57   C4WTS5   A0A0C9QAU5   A0A1D2NIH7   E9GIU9   A0A182SE99   A0A2H8TIT4   A0A0P5VLF9   A0A0P5ZLE4   A0A164MNA3  

Pubmed

19121390    28756777    26227816    26354079    25315136    17510324    + More
26483478    24945155    25348373    17994087    24495485    26108605    15632085    24438588    20920257    23761445    20966253    10731132    12537572    12537569    12364791    14747013    17210077    25244985    24845553    17550304    20353571    25401762    27129103    26823975    18362917    19820115    28004739    22874750    27289101    21292972   

EMBL

BABH01034350    ODYU01006550    SOQ48492.1    NWSH01000446    PCG76345.1    GDQN01006730    + More
JAT84324.1    KZ149929    PZC77466.1    JTDY01001421    KOB73905.1    KQ460367    KPJ15527.1    KQ459356    KPJ01273.1    GANO01003666    JAB56205.1    KA647828    AFP62457.1    CH477831    EAT35833.1    JXUM01089774    KQ563796    KXJ73294.1    GAPW01002584    JAC11014.1    GAPW01002481    JAC11117.1    CP012526    ALC46691.1    GDHF01000353    JAI51961.1    GAKP01021856    GAKP01021854    GAKP01021852    GAKP01021850    JAC37096.1    JXJN01024735    CH902617    EDV44203.1    GGFK01007941    MBW41262.1    GAMC01015762    GAMC01015761    GAMC01015760    GAMC01015759    JAB90794.1    JRES01000953    KNC26835.1    CM000070    EAL27062.1    ATLV01015925    KE525044    KFB40886.1    CH479186    EDW38816.1    GFDL01011235    JAV23810.1    CH964232    EDW80911.1    ADMH02001206    ETN63679.1    OUUW01000005    SPP80751.1    GGFM01003628    MBW24379.1    GGFM01003627    MBW24378.1    GGFJ01007101    MBW56242.1    GGFJ01007437    MBW56578.1    APCN01000420    GGFJ01007100    MBW56241.1    AE014297    AY071013    AAAB01008859    EAA08051.3    AXCN02000215    CH954182    EDV54116.1    CH480815    EDW43221.1    NEVH01012095    PNF30403.1    DS231968    EDS29665.1    AXCM01002615    KK852605    KDR20400.1    CH916373    EDV94725.1    CH933806    EDW16410.1    CM000160    EDW98033.1    CH940652    EDW59380.2    LJIG01009075    KRT83805.1    CCAG010016377    EZ422625    ADD18901.1    UFQS01000027    UFQT01000027    SSW97717.1    SSX18103.1    GBHO01007196    JAG36408.1    GBHO01007193    GBRD01007856    JAG36411.1    JAG57965.1    GDKW01003152    JAI53443.1    GDHC01000285    JAQ18344.1    GECL01001850    JAP04274.1    KQ971354    EFA06176.1    GDRN01076476    JAI62892.1    CVRI01000053    CRK99794.1    GEZM01028189    JAV86395.1    GFDF01005043    JAV09041.1    AJVK01061051    JX122918    AFQ22727.1    GDIQ01086014    JAN08723.1    GDIQ01226011    JAK25714.1    GDIQ01079817    JAN14920.1    GDIQ01103455    JAL48271.1    GDIP01169581    JAJ53821.1    GDIQ01079816    JAN14921.1    ABLF02010630    AK340749    BAH71295.1    GBYB01000324    JAG70091.1    LJIJ01000031    ODN05012.1    GL732547    EFX80592.1    GFXV01002211    MBW14016.1    GDIP01098409    JAM05306.1    GDIP01042713    JAM61002.1    LRGB01002993    KZS05207.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053240    UP000053268    UP000095301    + More
UP000008820    UP000069940    UP000249989    UP000092553    UP000092443    UP000092460    UP000007801    UP000069272    UP000037069    UP000075900    UP000075880    UP000075884    UP000001819    UP000030765    UP000008744    UP000007798    UP000000673    UP000268350    UP000075902    UP000075881    UP000075903    UP000075885    UP000076407    UP000075882    UP000075840    UP000000803    UP000007062    UP000192221    UP000075886    UP000008711    UP000001292    UP000235965    UP000091820    UP000076408    UP000075920    UP000002320    UP000075883    UP000027135    UP000095300    UP000192223    UP000001070    UP000009192    UP000092445    UP000002282    UP000008792    UP000092444    UP000078200    UP000007266    UP000183832    UP000092462    UP000007819    UP000094527    UP000000305    UP000075901    UP000076858   

PRIDE

H9JGR7    Q9VCX3   

Pfam

PF04280   Tim44

Interpro

IPR007379   Tim44-like_dom        + More
IPR032710   NTF2-like_dom_sf       
IPR021109   Peptidase_aspartic_dom_sf       

SUPFAM

SSF54427   SSF54427        + More
SSF50630   SSF50630       

Gene 3D

2.40.70.10    

ProteinModelPortal

H9JGR7   A0A2H1W6P1   A0A2A4JWF0   A0A1E1WBG4   A0A2W1BXQ4   A0A0L7LES8   + More
A0A194RD36   A0A0N1I4R6   U5EUX9   A0A1I8MI39   T1PIS2   Q16NB4   A0A182GUW0   A0A023EQW1   A0A023ENU9   A0A0M4EF17   A0A0K8WLE0   A0A034V1F7   A0A1A9YHS8   A0A1B0C2Y6   B3M013   A0A2M4AKK5   W8BM91   A0A182FKX8   A0A0L0C3B9   A0A182R3L6   A0A182IU87   A0A182NA60   Q29BD6   A0A182J3U5   A0A084VSE2   B4GNT3   A0A1Q3F8B1   B4NAU7   W5JLM5   A0A3B0K6X5   A0A2M3Z773   A0A182UIU0   A0A182K6W5   A0A182V980   A0A2M3Z7F7   A0A182P715   A0A2M4BTA7   A0A2M4BUY3   A0A182XI72   A0A182LF96   A0A182HT59   A0A2M4BTI5   Q9VCX3   Q7QC22   A0A1W4UCH8   A0A182QK80   B3P8M1   B4HER0   A0A2J7QPD6   A0A1A9WJ28   A0A182YKF8   A0A182VX78   B0WK91   A0A182M903   A0A067RIW5   A0A1I8Q110   A0A1W4X7Q7   B4JSI5   B4K7N9   A0A1B0AJ72   B4PMC8   B4M419   A0A0T6B9Q0   D3TMH3   A0A336K027   A0A1A9UWE5   A0A0A9YZ89   A0A0A9YXR4   A0A0P4VNX7   A0A146MF46   A0A0V0G7Y2   D6WPU1   A0A0P4W317   A0A1J1IJ52   A0A1Y1MPL0   A0A1L8DRK5   A0A1B0DHF6   J7HY95   A0A0P6CY01   A0A0N8B031   A0A0P6DD24   A0A0P5RB20   A0A0P5CJR4   A0A0P6DJ57   C4WTS5   A0A0C9QAU5   A0A1D2NIH7   E9GIU9   A0A182SE99   A0A2H8TIT4   A0A0P5VLF9   A0A0P5ZLE4   A0A164MNA3  

PDB

6GB2     E-value=2.09367e-58,     Score=570

KEGG

101743395    K17426 large subunit ribosomal protein L45 | (RefSeq) probable 39S ribosomal protein L45, mitochondr

GO

GO:0005840   GO:0003735   GO:0005762   GO:0032543   GO:0005739  

Subcellular location

Mitochondrion  

Length:

315

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00807

outside

1  -  315

 

 

Pi

183.568151

Theta

158.858825

Tajima's D

0.447813

CLR

0.238701

CSRT

0.498075096245188

Interpretation

Uncertain