Gene

KWMTBOMO04138

Pre Gene Modal

BGIBMGA008686

Annotation

PREDICTED:_neural_cell_adhesion_molecule_2-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr7(-):12121526-12186187      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.42

CDS

ATGCCTTACTTGAAAAAAGCAGATTTAACTTCAGCTGCAGTTGATTTTGTTCCAGTATCCACGATGGGTGTGGAGGCTGTGGTGGGGCGCACCGCCTCCCTGCCCTGTGACATCGAGCCCGACTCGAACGAGGATAGAGTCTACATGGTGCTGTGGTTCAGACACGCCGGTGGAAAACCTTTGTACAGCTTCGACGTTCGCGGCAGGAGTTTCAACAAGGCCCTGCACTGGTCAGACCCTACCGCCTTCGGGAGGAGGGCGTACTTCGTGACCATGTCCCGACCCTCGGCTCTGACTGTTGACGGCGTGCAGTTAGACGACGAAGGGGTATACCGCTGCAGAGTCGACTTCAAGAATTCGCCAACGAGAAACTTCCAGATCAAATTGAACGTCGTCGTTCCACCGCATCAGCTCCTTCTGTACGACGAAGCTGGTCATGACGTGGCGGGAGTTGTTGGGCCATTAGAAGAGGGGGGCAACTTTACATTGCTATGCGAGTTGAGAGGAGGTCGACCTCAACCAACCTTAACGTGGTTGATCAACAACAAGCCTATAGAAGACCACACGGTCCTCAAGAACGACGGCAAGGTCATCGTGAGCCGGATCAGCATAGGAGGAGCCGAGAGGAATTGGTTGAACACCAGCATACGATGCCAGGCCACCAACACTCCGCTGCTAAGTCCTCACGAAAGGACCGCCAGGGTTGAAATGCATCTGCGTCCACTTTCGGTCCTGATCAGTAACAAACCAGGACAAATGTCGGCCGATATGGAAATGACTCTTGTGTGCGTCTCGCACGGCAGTAGACCGCCAGCTCAGATAACGTGGTTCAGAGAAAACAGAAGATACACAAGGGGAAAGCACAGCGAGTTCACCAATGAGACCACGACAGTGAGCCGGCTGACGATGCTTCCCCAACCAGAAGACGACGGCGCCATCATCAGATGCAGAGCCGACAATCCCGTGCTGAGGGTCGCCCTGGAAGACTCATTCATGATGAGCGTTGTCTACCGACCGGTATTGACAATGGCATTAGGCAGCACATTGAACCCGAACGACATCAAAGAAGGCGACGACGTATACTTCGAGTGCAACATCAAGGCGAATCCAAAGGAACACCGCATCACTTGGTATCACAACGATGAGCCGGTCCTCCAGAATATATCGTCAGGAGTCTTCATCAGCACCAAGTCCTTAGTTCTGCAGCGGGTGACGAAGGTGGATGGAGGTCTGTACACGTGTCGAGCTGCTAATCAGATGGGAGAATCTCACAGTCGGGCCGTTTACCTTAGAGTTCAATATGCTCCGACTTGCGCCCAACCTTCTCCCCTGGTGGTCGGCGCGCGACTGGACGAGCCTCTCCGCGTGCGGTGCACCGTCAGCGCCGACCCCGCCGACGTCTCCTTCTACTGGCAGTTCAACAACAGCGGCGAGAGTTTCCAAGTCTCCCCCGCTAGATACGTGTCCACGGGCGGCACCACCAGTGAGCTCCGGTACCGGGCGGCCAGCGAACGGGACTACGGGGCCCTGCTGTGCCGCGCCACCAACTCGGTCGGCAGACAGAAGCGGCCGTGCGTCTTCCAGATTGTTCCGGCAGCAAGACCTTCTCCGCCGAGAAACTGTACAACGAATAGAGTTCTAAAGAACAATTTAGCGTATCTTGCTGTGAAATGCGTCGCTGGCTACGACGGGGGATTGACCCAGCACTTCACCCTCGACGCTGTGGGAGAAATCACCAGAGTCCTGGTCAATGCTTCAGCCGGATCAAGTGATTTAATAGTGCATCTAAACGTAAGCTGGTCAACCCTGGAGTCTTTGTCGGAAGATGAGGAACTTGTGGTGACAGCACGGAACAGCAAAGGGGCTTCGGATCCCGTTCCCTTGAGAGAAGTGGTCTTCAGAGATGCTGCAAAAAGAGCAGAAAGCACGACAAGAGCGGAGAGCAAGTTTCCCCTGGCTGCAACTTTAGCTGCTCTAGCGGCGATCCTCACTGCAGTGTCCGCTGTGGTCATTGTGCTTTTGCGCAAGCGCAACGACAACTCCTCGAACAGTAAACGACCATCGCAGAGCGTGGTGCAGGTAGACGCTGAGGGCAGACGCTACCTCATAGCCTACCCTCCCGCTGACAAACCAGAGTCCAAGCCGGATATCCTCAATCCAAAATCTGACAACGAACCCCCACGCGTGGTGTTGGAGTCATGCGACAGTAAGAACTACGTCATCAGGGAGGTCAATAGTGACCACCGACCTGCGGCATACAACTCTCACACGCCTGACGAAGGATTGATGCCGCAGAGATAA

Protein

MPYLKKADLTSAAVDFVPVSTMGVEAVVGRTASLPCDIEPDSNEDRVYMVLWFRHAGGKPLYSFDVRGRSFNKALHWSDPTAFGRRAYFVTMSRPSALTVDGVQLDDEGVYRCRVDFKNSPTRNFQIKLNVVVPPHQLLLYDEAGHDVAGVVGPLEEGGNFTLLCELRGGRPQPTLTWLINNKPIEDHTVLKNDGKVIVSRISIGGAERNWLNTSIRCQATNTPLLSPHERTARVEMHLRPLSVLISNKPGQMSADMEMTLVCVSHGSRPPAQITWFRENRRYTRGKHSEFTNETTTVSRLTMLPQPEDDGAIIRCRADNPVLRVALEDSFMMSVVYRPVLTMALGSTLNPNDIKEGDDVYFECNIKANPKEHRITWYHNDEPVLQNISSGVFISTKSLVLQRVTKVDGGLYTCRAANQMGESHSRAVYLRVQYAPTCAQPSPLVVGARLDEPLRVRCTVSADPADVSFYWQFNNSGESFQVSPARYVSTGGTTSELRYRAASERDYGALLCRATNSVGRQKRPCVFQIVPAARPSPPRNCTTNRVLKNNLAYLAVKCVAGYDGGLTQHFTLDAVGEITRVLVNASAGSSDLIVHLNVSWSTLESLSEDEELVVTARNSKGASDPVPLREVVFRDAAKRAESTTRAESKFPLAATLAALAAILTAVSAVVIVLLRKRNDNSSNSKRPSQSVVQVDAEGRRYLIAYPPADKPESKPDILNPKSDNEPPRVVLESCDSKNYVIREVNSDHRPAAYNSHTPDEGLMPQR

Uniprot

A0A3S2L969   A0A212F6U3   A0A2A4JZZ9   A0A2W1BE05   A0A3S2P2C6   A0A194RL28   + More
A0A194RLD1   A0A212FKA1   A0A2W1BQV1   A0A194PGE6   A0A2H1V4B0   A0A1W4WMZ2   T1HZW4   A0A1W4WBP5   E2BN54   A0A195C8J0   F4WG39   A0A195EGH0   A0A3L8D739   A0A195F0N4   A0A195BHH6   A0A151XBQ1   A0A026WJB3   Q0KIB1   A0A087ZZQ1   A0A2A3ES63   E2AKZ8   A0A154PH73   A0A158NT21   B3LWB5   A0A1W4V3R2   B4PVJ8   A0A1I8NHG5   Q0KIB0   A0A3B0K2R1   A0A3B0JXK8   B5DVI2   A0A2C9GQ20   A0A232F405   B4KAZ5   A0A0Q9WZK8   K7IQE1   B4NHF7   A0A0M4ENU1   A0A0Q9VZT0   B4JYH7   W8AHD9   W8APF5   A0A0C9RJZ2   A0A0L7R1L0   A0A0M8ZVF6   A0A0L7LLH3   A0A2A4JIS9   A0A139WE49   A0A0A9ZBH5   A0A0K8T359   C0PTV4   D6WPK9   A0A1W4UR97   A0A1W4V3H8   A0A1W4V371   A0A1B6C6V9   A0A067RCL4   B4HFS3   B3P448   Q9VFU7   A0A0M5JCQ5   B4R186   B4PQF3   A0A1B6G259   A0A2A4JDY9   A0A1B6LB71   A0A2J7PYN3   A0A0R3NN42   A0A1Y1NKS5   B3LX91   Q297Q6   B4G2W0   A0A3B0KV58   A0A1W4WRT9   A0A1W4WQT7   B4JI81   A0A2H1WJ89   A0A1W4WFY8   A0A1I8PBW5   B4NKE4   A0A0Q9W1D8   A0A0L0BY62   A0A034W9N8  

Pubmed

22118469    28756777    26354079    20798317    21719571    30249741    + More
24508170    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    21347285    17994087    18057021    17550304    25315136    15632085    28648823    20075255    24495485    26227816    18362917    19820115    25401762    26823975    24845553    26109357    26109356    28004739    23185243    26108605    25348373   

EMBL

RSAL01000082    RVE48510.1    AGBW02009972    OWR49444.1    NWSH01000305    PCG77591.1    + More
KZ150231    PZC71994.1    RSAL01000001    RVE55340.1    KQ460045    KPJ18124.1    KPJ18125.1    AGBW02008103    OWR54162.1    KZ149994    PZC75507.1    KQ459604    KPI92377.1    ODYU01000599    SOQ35673.1    ACPB03001712    GL449385    EFN82816.1    KQ978205    KYM96491.1    GL888128    EGI66806.1    KQ978957    KYN26989.1    QOIP01000012    RLU15688.1    KQ981897    KYN33674.1    KQ976488    KYM83604.1    KQ982320    KYQ57806.1    KK107185    EZA55761.1    AE014297    ABI31143.1    KZ288194    PBC33881.1    GL440425    EFN65915.1    KQ434905    KZC11236.1    ADTU01025477    ADTU01025478    ADTU01025479    ADTU01025480    CH902617    EDV43748.2    KPU80440.1    CM000160    EDW97807.2    ABI31142.1    OUUW01000005    SPP80239.1    SPP80240.1    CM000070    EDY68097.2    APCN01002160    APCN01002161    NNAY01001084    OXU25200.1    CH933806    EDW14673.2    KRG01141.1    CH964272    EDW84633.2    CP012526    ALC46414.1    CH940656    KRF78339.1    CH916377    EDV90739.1    GAMC01018645    JAB87910.1    GAMC01018648    JAB87907.1    GBYB01013606    GBYB01013607    JAG83373.1    JAG83374.1    KQ414667    KOC64681.1    KQ435863    KOX70423.1    JTDY01000670    KOB76275.1    NWSH01001251    PCG71977.1    KQ971354    KYB26230.1    GBHO01002348    GDHC01008300    JAG41256.1    JAQ10329.1    GBRD01006221    JAG59600.1    BT071799    ACN43735.2    EFA06826.2    GEDC01028050    JAS09248.1    KK852551    KDR21492.1    CH480815    EDW42308.1    CH954181    EDV49222.1    AAF54952.3    AFH06404.1    ALC47181.1    CM000364    EDX13063.1    EDW97249.1    KRK03606.1    GECZ01013250    JAS56519.1    NWSH01001734    PCG70297.1    GEBQ01019020    JAT20957.1    NEVH01020344    PNF21422.1    KRT00496.1    GEZM01002471    JAV97235.1    EDV41691.1    KPU79296.1    KPU79297.1    KPU79299.1    EAL28149.2    KRT00494.1    KRT00495.1    KRT00497.1    CH479179    EDW24155.1    OUUW01000013    SPP87858.1    CH916369    EDV92962.1    ODYU01008707    SOQ52514.1    EDW84074.1    CH940652    KRF78738.1    JRES01001160    KNC24967.1    GAKP01006691    JAC52261.1   

Proteomes

UP000283053    UP000007151    UP000218220    UP000053240    UP000053268    UP000192223    + More
UP000015103    UP000008237    UP000078542    UP000007755    UP000078492    UP000279307    UP000078541    UP000078540    UP000075809    UP000053097    UP000000803    UP000005203    UP000242457    UP000000311    UP000076502    UP000005205    UP000007801    UP000192221    UP000002282    UP000095301    UP000268350    UP000001819    UP000075840    UP000215335    UP000009192    UP000002358    UP000007798    UP000092553    UP000008792    UP000001070    UP000053825    UP000053105    UP000037510    UP000007266    UP000027135    UP000001292    UP000008711    UP000000304    UP000235965    UP000008744    UP000095300    UP000037069   

PRIDE

Q0KIB1    Q0KIB0    C0PTV4    Q9VFU7   

Pfam

PF07686   V-set        + More
PF08205   C2-set_2
PF00047   ig
PF16012   DUF4780
PF07679   I-set

Interpro

IPR013106   Ig_V-set        + More
IPR003598   Ig_sub2       
IPR036179   Ig-like_dom_sf       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR013162   CD80_C2-set       
IPR013783   Ig-like_fold       
IPR013151   Immunoglobulin       
IPR031961   DUF4780       
IPR003961   FN3_dom       
IPR036116   FN3_sf       
IPR013098   Ig_I-set       

SUPFAM

SSF48726   SSF48726        + More
SSF49265   SSF49265       

Gene 3D

2.60.40.10    

CDD

cd00063  FN3

ProteinModelPortal

A0A3S2L969   A0A212F6U3   A0A2A4JZZ9   A0A2W1BE05   A0A3S2P2C6   A0A194RL28   + More
A0A194RLD1   A0A212FKA1   A0A2W1BQV1   A0A194PGE6   A0A2H1V4B0   A0A1W4WMZ2   T1HZW4   A0A1W4WBP5   E2BN54   A0A195C8J0   F4WG39   A0A195EGH0   A0A3L8D739   A0A195F0N4   A0A195BHH6   A0A151XBQ1   A0A026WJB3   Q0KIB1   A0A087ZZQ1   A0A2A3ES63   E2AKZ8   A0A154PH73   A0A158NT21   B3LWB5   A0A1W4V3R2   B4PVJ8   A0A1I8NHG5   Q0KIB0   A0A3B0K2R1   A0A3B0JXK8   B5DVI2   A0A2C9GQ20   A0A232F405   B4KAZ5   A0A0Q9WZK8   K7IQE1   B4NHF7   A0A0M4ENU1   A0A0Q9VZT0   B4JYH7   W8AHD9   W8APF5   A0A0C9RJZ2   A0A0L7R1L0   A0A0M8ZVF6   A0A0L7LLH3   A0A2A4JIS9   A0A139WE49   A0A0A9ZBH5   A0A0K8T359   C0PTV4   D6WPK9   A0A1W4UR97   A0A1W4V3H8   A0A1W4V371   A0A1B6C6V9   A0A067RCL4   B4HFS3   B3P448   Q9VFU7   A0A0M5JCQ5   B4R186   B4PQF3   A0A1B6G259   A0A2A4JDY9   A0A1B6LB71   A0A2J7PYN3   A0A0R3NN42   A0A1Y1NKS5   B3LX91   Q297Q6   B4G2W0   A0A3B0KV58   A0A1W4WRT9   A0A1W4WQT7   B4JI81   A0A2H1WJ89   A0A1W4WFY8   A0A1I8PBW5   B4NKE4   A0A0Q9W1D8   A0A0L0BY62   A0A034W9N8  

PDB

5ZO2     E-value=6.9508e-13,     Score=182

KEGG

101746619    no KO assigned | (RefSeq) neural cell adhesion molecule 2-like

GO

GO:0016021   GO:0005515   GO:0006032   GO:0004553   GO:0005975   GO:0006508   GO:0042555   GO:0006260   GO:0004672   GO:0048384  

Length:

766

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.57584

Exp number, first 60 AAs:

0.01894

Total prob of N-in:

0.00117

outside

1  -  651

TMhelix

652  -  674

inside

675  -  766

 

 

Pi

291.673126

Theta

170.816322

Tajima's D

1.37416

CLR

0.596211

CSRT

0.75671216439178

Interpretation

Uncertain