SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04136  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008710
Annotation
PREDICTED:_uncharacterized_protein_LOC105841582_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 4.463
 

Sequence

CDS
ATGCGTTGCTTGGTAATGTTGTGTGCTTTAATCGCGGTAGCTTTTGCCGCCCCCAGCACCATCGGAGATGTCCCGACAGCCCTGCCCGCGTATCATCGTGGCTGCATGTTCATCTTCGGAAATTGCACAAGGCACTGCGAAGTAGGCACCCACGTCTACACGAACGACTGTGGTCCCTTTATGCCTGAGGCCACATGTGACGTGCCAGTTCCAGTTCAAGAGACACACTCCGTTTGCGACTTCTCCGCGTGCTACTGCGACCCTGGTACAGTCAGGGACACGAAAACGAAGAAATGCGTCAAACTCGAAGACTGCTCCAAATGA
Protein
MRCLVMLCALIAVAFAAPSTIGDVPTALPAYHRGCMFIFGNCTRHCEVGTHVYTNDCGPFMPEATCDVPVPVQETHSVCDFSACYCDPGTVRDTKTKKCVKLEDCSK

Summary

Interpro
IPR036084   Ser_inhib-like_sf       
SUPFAM
SSF57567   SSF57567       

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.999531
 
 
Length:
107
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
16.65948
Exp number, first 60 AAs:
16.65948
Total prob of N-in:
0.76792
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  107
 
 

Population Genetic Test Statistics

Pi
132.794713
Theta
135.806407
Tajima's D
0.464043
CLR
0
CSRT
0.510324483775811
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
26822097 GCVWIIGK 100.00 4e-18
24402669 MNVISDAIK 100.00 4e-18
28467696 MPDEFDIIRK 100.00 4e-18
29197581 GCVWIIGK 100.00 4e-18
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