Gene

KWMTBOMO04122

Annotation

PREDICTED:_uncharacterized_protein_LOC105387121_[Plutella_xylostella]

Location

Bomo_Chr7(-):11807798-11808919      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.754

CDS

ATGACTTCAGTTGAAGCAGAAGTAGCCGTTGTTTCTGTAACTTCGAGGATTCCTGAGTTTTGGTGCGACCAACCACGCTTATGGTACGTGCAATGTGAAGCTATCCTAGCACCGCAGAAGTTATGTGATGAGGCCCGATACAACCTAGTTGTTACTAAATTAGGCAAGGACGTCGTACAACAGGTCAGTGACATTCTATTAAAACCACCTGATGAGAAGAAATTTGATACGCTGAAAGAACGTTTGTTAAAAATCTATGAAGAATCGGAGATGAGACAATTTCAAAAATTGCTTAGCGAGATGGAGTTGGGGGATCAGAAGCCCTCTCAACTCTTACGCCGTATGAGGGATCTGGCTCGCGATAAAATGCCCGATGAGACCCTTAGAATTATGTGGCAAGGTCATCTACCCGCGGCAGTTCGAGGAGTGCTAGCAGTCTGCGAAGCAAAAGACTTAGAGCACCTGTCGGCAATTGCGGATAAAGTCATCGAGACGACGCAGCCCTTGCAAGTGTCTGAAGTACAGAGCACTCCTGGCAGTAGTTCCAGTACTGACCATAGCTTTATACTGGCGGAGATAGCCAAATTAAGCTTAAAAATAAGAGAGATGGAGCAAAGTCGCAATTTTCACCGTTTTCGACCGCGATCACGGTCATCATCACGTAATCGTAATACGAGTCGACGTTCACCGAGCAGCCCGGACTGGCTATGTGTTTATCATTTTAGATATCGCCATAGAGCTAGAAAATGTGTAGAACCGTGTGCCTGGAAAAAGCCAGTGATTCAGGAAAACTAA

Protein

MTSVEAEVAVVSVTSRIPEFWCDQPRLWYVQCEAILAPQKLCDEARYNLVVTKLGKDVVQQVSDILLKPPDEKKFDTLKERLLKIYEESEMRQFQKLLSEMELGDQKPSQLLRRMRDLARDKMPDETLRIMWQGHLPAAVRGVLAVCEAKDLEHLSAIADKVIETTQPLQVSEVQSTPGSSSSTDHSFILAEIAKLSLKIREMEQSRNFHRFRPRSRSSSRNRNTSRRSPSSPDWLCVYHFRYRHRARKCVEPCAWKKPVIQEN

Uniprot

H9J4N2   A0A2A4JUK3   A0A2H1WB17   A0A2H1V5N9   A0A2W1BAJ4   A0A1E1WLV2   + More
A0A0L7LFW5   A0A0L7LSS0   A0A0L7LFF1   A0A0L7KTF4   A0A2A4J536   T1HGU2   T1I831   A0A2W1BA89   A0A026VRX8   A0A151JF00   A0A0J7K6L8   A0A026VX87   A0A2L2YSA7   A0A0J7K6V1   A0A151JR52   A0A151K1Q2   A0A182G9J3   A0A182H3L9   A0A224XWW2   A0A151K2U9   A0A0A9YNN7   T1HU96   T1IE13   A0A1Y1MA44   A0A034V7S3   A0A0K3CPY2   A0A085NBV0   T1IE85   A0A085N631   A0A139WA14   A0A085M716   D7GYF3   A0A0J7NAK0   D7EJX5   A0A085NTM8   A0A151IZ47   A0A0N5DP72   D6WTN9   A0A0J7K6V3   A0A131Z7F2   A0A0J7K7T5   A0A0J7KD10   A0A0J7K0A7   A0A0K8SFH9   A0A151ITG2   A0A0A9Z2L8   A0A2G8JL30   A0A151JCH0   A0A0L8GMC8   A0A151K0A8   A0A154P674   A0A0J7K6I6   A0A2A4K2H4   A0A2G8L3A3   A0A293M3N6  

Pubmed

19121390    28756777    26227816    24508170    26561354    26483478    + More
25401762    28004739    25348373    23552491    24929829    18362917    19820115    26830274    29023486   

EMBL

BABH01022003    NWSH01000589    PCG75479.1    ODYU01007352    SOQ50042.1    ODYU01000815    + More
SOQ36165.1    KZ150191    PZC72412.1    GDQN01003070    JAT87984.1    JTDY01001300    KOB74269.1    JTDY01000162    KOB78510.1    KOB74268.1    JTDY01005998    KOB66385.1    NWSH01003151    PCG66856.1    ACPB03011651    ACPB03012735    KZ150227    PZC72038.1    KK111495    EZA46390.1    KQ979024    KYN24351.1    LBMM01012633    KMQ86093.1    KK107653    EZA48265.1    IAAA01053498    IAAA01053499    LAA11042.1    LBMM01012923    LBMM01012917    KMQ85926.1    KMQ85930.1    KQ978645    KYN29457.1    LKEX01009256    KYN50060.1    JXUM01049417    KQ561603    KXJ78027.1    JXUM01107723    KQ565168    KXJ71261.1    GFTR01003955    JAW12471.1    LKEY01014428    KYN50445.1    GBHO01008962    JAG34642.1    ACPB03016217    ACPB03037918    GEZM01036621    JAV82564.1    GAKP01020775    JAC38177.1    LN877232    CTR11709.1    KL367519    KFD66946.1    ACPB03034542    KL367547    KFD64927.1    KQ971745    KYB24749.1    KL363221    KFD53012.1    GG695519    EFA13383.1    LBMM01007548    KMQ89630.1    KQ971759    EFA12902.2    KL367475    KFD72824.1    KQ980726    KYN14011.1    KQ971355    EFA07205.2    LBMM01012479    KMQ86203.1    GEDV01001795    JAP86762.1    LBMM01012075    KMQ86422.1    LBMM01009142    KMQ88358.1    LBMM01018089    KMQ83878.1    GBRD01013927    JAG51899.1    KQ981018    KYN10257.1    GBHO01005513    JAG38091.1    MRZV01001674    PIK36447.1    KQ979048    KYN23218.1    KQ421206    KOF78131.1    KQ981301    KYN43041.1    KQ434816    KZC06854.1    LBMM01013103    KMQ85816.1    NWSH01000267    PCG77880.1    MRZV01001127    MRZV01000236    PIK40395.1    PIK54731.1    GFWV01009909    MAA34638.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000015103    UP000053097    UP000078492    + More
UP000036403    UP000078542    UP000069940    UP000249989    UP000007266    UP000046395    UP000230750    UP000053454    UP000078541    UP000076502   

PRIDE

H9J4N2   

Pfam

PF10551   MULE        + More
PF00078   RVT_1
PF17921   Integrase_H2C2
PF17917   RT_RNaseH
PF00665   rve
PF17919   RT_RNaseH_2

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR018289   MULE_transposase_dom       
IPR000477   RT_dom       
IPR041588   Integrase_H2C2       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR041373   RT_RNaseH       
IPR036397   RNaseH_sf       
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR041577   RT_RNaseH_2       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

H9J4N2   A0A2A4JUK3   A0A2H1WB17   A0A2H1V5N9   A0A2W1BAJ4   A0A1E1WLV2   + More
A0A0L7LFW5   A0A0L7LSS0   A0A0L7LFF1   A0A0L7KTF4   A0A2A4J536   T1HGU2   T1I831   A0A2W1BA89   A0A026VRX8   A0A151JF00   A0A0J7K6L8   A0A026VX87   A0A2L2YSA7   A0A0J7K6V1   A0A151JR52   A0A151K1Q2   A0A182G9J3   A0A182H3L9   A0A224XWW2   A0A151K2U9   A0A0A9YNN7   T1HU96   T1IE13   A0A1Y1MA44   A0A034V7S3   A0A0K3CPY2   A0A085NBV0   T1IE85   A0A085N631   A0A139WA14   A0A085M716   D7GYF3   A0A0J7NAK0   D7EJX5   A0A085NTM8   A0A151IZ47   A0A0N5DP72   D6WTN9   A0A0J7K6V3   A0A131Z7F2   A0A0J7K7T5   A0A0J7KD10   A0A0J7K0A7   A0A0K8SFH9   A0A151ITG2   A0A0A9Z2L8   A0A2G8JL30   A0A151JCH0   A0A0L8GMC8   A0A151K0A8   A0A154P674   A0A0J7K6I6   A0A2A4K2H4   A0A2G8L3A3   A0A293M3N6  

KEGG

101742238    no KO assigned | (RefSeq) uncharacterized LOC101742238

GO

GO:0005634   GO:0004190   GO:0003676   GO:0015074   GO:0005524  

Length:

264

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00036

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04074

outside

1  -  264

 

 

Pi

191.772111

Theta

143.268943

Tajima's D

2.076492

CLR

1.26683

CSRT

0.892005399730013

Interpretation

Uncertain