Gene

KWMTBOMO04119

Pre Gene Modal

BGIBMGA005209

Annotation

PREDICTED:_uncharacterized_protein_LOC105842679_[Bombyx_mori]

Location

Bomo_Chr7(+):11781900-11782595      View in EpiBrowser

Full name

ATP-dependent DNA helicase      

Location in the cell

Nuclear   Reliability : 2.259

CDS

ATGGTGAATCCGAGTAAAAGACGTAGAGGAAATAATAAAGCTGAAAACTACGAAAAGTTGGTTGAGGATATGCTTACAAATTTTAAGGCCATGGGCTGCAGGATGTCATTAAAAGTACATATGCTGCATGCTCATTTGGATAAATTTAAAAACAATATGGGAGCCTATTCCGAAGAGCAAGGAGAACGTTTCCATCAGGACATCATGAATTTTGAACAACGCTATCAAGGCCAATACAATGAAAACATGATGGGCGACTATATTTGGGGTTTATTGAGAGAAAGTAGCTATGAACATAAAAGAAAAAGTAAAAGTGTGCACTTTTAA

Protein

MVNPSKRRRGNNKAENYEKLVEDMLTNFKAMGCRMSLKVHMLHAHLDKFKNNMGAYSEEQGERFHQDIMNFEQRYQGQYNENMMGDYIWGLLRESSYEHKRKSKSVHF

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Uniprot

T1I8M0   T1HR57   R9XJ78   T1HKC5   T1H8T0   T1HHC3   + More
D6WGQ1   A0A151K2C4   A0A151IJQ9   A0A2J7QXK6   A0A2J7QG64   A0A2J7R554   A0A2J7RBV7   A0A2J7PET1   T1FLZ1   A0A2J7PKD9   A0A2J7PUD9   A0A151IZG3   V5GT02   A0A1B6LPV5   K7JWZ1   A0A151WWA4   A0A1B6FYU1   A0A0V1M1M0   A0A0J7KKE2   A0A0V1N5I0   T1FK50   T1F0J6   T1FC71   T1FFM5   A0A0V1MYT4   K7JLC9   A0A151I7B6   A0A0V1MXV0   A0A1B6KTS2   A0A0J7K6Q9   A0A1B0DLA7   A0A0J7KGK0   K7K0J2   T1ET34   A0A0J7MTU7   T1FLQ6   A0A151I7I3   A0A151WL34   A0A0J7K1T4   T1F7E9   A0A151IMQ7   T1FJ14   A0A3L8D5E7   A0A151JPZ6   A0A151I8N8   A0A2A4JE59   T1F5R7   A0A151J5D1   A0A151XHL6   A0A0V1H537   A0A0J7KNJ2   K7JPX1   A0A2S2PYM8   T1FBV4   A0A2J7QVI8   T1EMM0   N6TRA4   K7K089   J9M0P4   A0A2J7QQ84   A0A151J4T4   K7JGB9   T1F8E5   B3SDN8   B9W4L2   A0A2H1VH01   A0A151IXS6   T1FC03   T1F5V6   T1EU09   T1F4M2   A0A0V1GPN4   A0A151I634   A0A1B0CSA1   A0A151IHF1   A0A0V1E788   A0A0V0XJ90   A0A3L8D898   A0A151J4P4   T1EWE5   T1EWI2   A0A0V1I9W3   A0A3S2LMX5   A0A151JQB4   T1FLI1   A0A026WXM1   T1F7P3   A0A0V1F7H9   T1ENK0   T1F7K8  

EC Number

3.6.4.12

Pubmed

18362917    19820115    23254933    20075255    30249741    23537049    + More
18719581    24508170   

EMBL

ACPB03020207    ACPB03009529    EF710639    AGO14414.1    ACPB03017840    ACPB03012626    + More
ACPB03005055    KQ971327    EEZ99611.2    LKEX01017198    KYN50270.1    KQ977297    KYN03872.1    NEVH01009379    PNF33316.1    NEVH01014836    PNF27561.1    NEVH01007395    PNF35968.1    NEVH01021935    NEVH01021574    NEVH01016945    NEVH01012564    NEVH01009765    NEVH01006566    NEVH01005890    NEVH01005312    NEVH01003746    NEVH01002687    NEVH01002549    NEVH01001362    PNF19214.1    PNF19612.1    PNF25043.1    PNF30218.1    PNF32869.1    PNF37912.1    PNF38301.1    PNF38709.1    PNF40208.1    PNF41665.1    PNF42166.1    PNF42683.1    NEVH01026088    NEVH01025127    NEVH01009083    NEVH01007402    NEVH01006727    NEVH01002562    PNF14850.1    PNF16142.1    PNF33735.1    PNF35867.1    PNF36872.1    PNF41992.1    AMQM01012059    KB097190    ESN98204.1    NEVH01024569    PNF16801.1    NEVH01021199    NEVH01019966    PNF19946.1    PNF22109.1    KQ980702    KYN14472.1    GALX01003704    JAB64762.1    GEBQ01014259    JAT25718.1    AAZX01025635    KQ982697    KYQ51955.1    GECZ01014419    JAS55350.1    JYDO01000323    KRZ65603.1    LBMM01006142    KMQ90883.1    JYDO01000007    KRZ79249.1    AMQM01008975    KB095891    ESO10333.1    AMQM01002958    KB095959    ESO09414.1    AMQM01006171    KB097304    ESN97698.1    AMQM01007132    AMQM01007133    KB097572    ESN94079.1    JYDO01000024    KRZ76929.1    AAZX01026508    KQ978433    KYM93998.1    JYDO01000069    JYDO01000036    JYDO01000028    JYDO01000019    JYDO01000003    KRZ73025.1    KRZ75659.1    KRZ76474.1    KRZ77420.1    KRZ80366.1    GEBQ01025176    JAT14801.1    LBMM01012852    KMQ85949.1    AJVK01070982    LBMM01007880    KMQ89336.1    AAZX01026046    AMQM01001161    KB097143    ESN99240.1    LBMM01017949    KMQ83920.1    AMQM01011341    AMQM01011342    KB096270    ESO07053.1    KQ978418    KYM94050.1    KQ982973    KYQ48592.1    LBMM01016961    KMQ84254.1    AMQM01004766    AMQM01004767    KB096676    ESO03076.1    KQ977055    KYN06056.1    AMQM01008506    KB097788    ESN89970.1    QOIP01000012    RLU15717.1    KQ978697    KYN29160.1    KQ978353    KYM94643.1    NWSH01001806    PCG70066.1    AMQM01004311    AMQM01004312    KB096502    ESO04311.1    KQ980017    KYN18238.1    KQ982130    KYQ59847.1    JYDP01000138    KRZ05510.1    LBMM01005109    KMQ91809.1    AAZX01022931    GGMS01001300    MBY70503.1    AMQM01006096    KB097269    ESN97900.1    NEVH01009952    PNF32595.1    AMQM01000003    KB095811    ESO11939.1    APGK01054876    KB741253    KB632340    ENN71795.1    ERL92937.1    AAZX01005084    ABLF02022650    NEVH01012087    PNF30732.1    KQ980100    KYN17766.1    AAZX01001882    AMQM01005008    AMQM01005009    KB096743    ESO01734.1    ESO01735.1    DS985282    EDV19166.1    FM212912    CAR82249.1    ODYU01002487    SOQ40031.1    KQ980792    KYN13106.1    AMQM01006116    ESN97976.1    AMQM01004332    ESO04366.1    AMQM01001384    KB097495    ESN96365.1    AMQM01003929    KB096365    ESO05370.1    JYDP01000594    JYDP01000144    KRZ00058.1    KRZ05185.1    KQ978517    KYM93378.1    AJWK01025825    KQ977610    KYN01405.1    JYDR01000089    KRY69512.1    JYDU01000260    KRX87925.1    QOIP01000011    RLU16501.1    KQ980104    KYN17742.1    AMQM01001980    KB097639    ESN93029.1    AMQM01001999    ESN93095.1    JYDS01000272    JYDV01000125    KRZ19630.1    KRZ30895.1    RSAL01007859    RVE39820.1    KQ978650    KYN29423.1    AMQM01010827    AMQM01010828    KB095935    ESO09676.1    KK107065    EZA60810.1    AMQM01004835    KB096716    ESO02739.1    JYDT01000197    KRY81928.1    AMQM01000184    ESO12521.1    AMQM01004807    ESO03183.1   

Proteomes

UP000015103    UP000007266    UP000078542    UP000235965    UP000015101    UP000078492    + More
UP000002358    UP000075809    UP000054843    UP000036403    UP000092462    UP000279307    UP000218220    UP000055024    UP000019118    UP000030742    UP000007819    UP000009022    UP000092461    UP000054632    UP000054815    UP000054805    UP000054826    UP000283053    UP000053097    UP000054995   

Pfam

PF05970   PIF1        + More
PF00078   RVT_1
PF00617   RasGEF

Interpro

IPR003609   Pan_app        + More
IPR016031   Trp_RNA-bd_attenuator-like_dom       
IPR010285   DNA_helicase_pif1-like       
IPR000477   RT_dom       
IPR001895   RASGEF_cat_dom       
IPR036964   RASGEF_cat_dom_sf       
IPR023578   Ras_GEF_dom_sf       

SUPFAM

SSF51219   SSF51219        + More
SSF48366   SSF48366       

Gene 3D

1.10.840.10    

ProteinModelPortal

T1I8M0   T1HR57   R9XJ78   T1HKC5   T1H8T0   T1HHC3   + More
D6WGQ1   A0A151K2C4   A0A151IJQ9   A0A2J7QXK6   A0A2J7QG64   A0A2J7R554   A0A2J7RBV7   A0A2J7PET1   T1FLZ1   A0A2J7PKD9   A0A2J7PUD9   A0A151IZG3   V5GT02   A0A1B6LPV5   K7JWZ1   A0A151WWA4   A0A1B6FYU1   A0A0V1M1M0   A0A0J7KKE2   A0A0V1N5I0   T1FK50   T1F0J6   T1FC71   T1FFM5   A0A0V1MYT4   K7JLC9   A0A151I7B6   A0A0V1MXV0   A0A1B6KTS2   A0A0J7K6Q9   A0A1B0DLA7   A0A0J7KGK0   K7K0J2   T1ET34   A0A0J7MTU7   T1FLQ6   A0A151I7I3   A0A151WL34   A0A0J7K1T4   T1F7E9   A0A151IMQ7   T1FJ14   A0A3L8D5E7   A0A151JPZ6   A0A151I8N8   A0A2A4JE59   T1F5R7   A0A151J5D1   A0A151XHL6   A0A0V1H537   A0A0J7KNJ2   K7JPX1   A0A2S2PYM8   T1FBV4   A0A2J7QVI8   T1EMM0   N6TRA4   K7K089   J9M0P4   A0A2J7QQ84   A0A151J4T4   K7JGB9   T1F8E5   B3SDN8   B9W4L2   A0A2H1VH01   A0A151IXS6   T1FC03   T1F5V6   T1EU09   T1F4M2   A0A0V1GPN4   A0A151I634   A0A1B0CSA1   A0A151IHF1   A0A0V1E788   A0A0V0XJ90   A0A3L8D898   A0A151J4P4   T1EWE5   T1EWI2   A0A0V1I9W3   A0A3S2LMX5   A0A151JQB4   T1FLI1   A0A026WXM1   T1F7P3   A0A0V1F7H9   T1ENK0   T1F7K8  

KEGG

105842679    no KO assigned | (RefSeq) uncharacterized LOC105842679

GO

GO:0000723   GO:0006310   GO:0005524   GO:0006281   GO:0003678   GO:0007264   GO:0005085   GO:0016021  

Length:

108

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0013

Exp number, first 60 AAs:

0.00114

Total prob of N-in:

0.62545

inside

1  -  108

 

 

Pi

241.626736

Theta

174.983986

Tajima's D

1.198116

CLR

0

CSRT

0.707114644267787

Interpretation

Uncertain