SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04107
Annotation
PREDICTED:_fibroblast_growth_factor_5_[Bombyx_mori]
Full name
Fibroblast growth factor      
Location in the cell
Nuclear   Reliability : 4.284
 

Sequence

CDS
ATGGGTGATACTAGAAGATACAAGAGGGATCTGTCGGACGACTGCGTCTTCGAAGAGCATATAGAAGAGAACAACTACAACACGTACTCGCGGATACGAGCCGGGAAGAAGACGTACGTGGCCCTCGGCAGCAACGGGAAGGCCAGGCGAACGCAGATACCACTGTCGCGGCCTCTGGGGAAGCTGTCGCACTACGCGCTCTCGCTGACCACAGAATGGAAGGGACCCAATCAGACGCACTGCTCACCCAAAAGGCACAGGGGCAAGCTGAAGAGGCCCCCGCCCAAACACAGAAACTGCTCGGTCAAGCCTCAGAACATGAGGCACAAACGGAAGCACAAAAAAGTGAAGAACCCCAAAAAGAAGCAACGCCATCCGAAGTCGAGGAGAAAACACATAAACGGAACGACCACCACGACGGAGGTGACGTGGGACGAGTCCACGATGTCCACCATGTCGACCACGACTGACGCCGAGTTTTTTCGGTCGGCGACCGCGCAGGAGGCGACCGGTCGCACGTGA
Protein
MGDTRRYKRDLSDDCVFEEHIEENNYNTYSRIRAGKKTYVALGSNGKARRTQIPLSRPLGKLSHYALSLTTEWKGPNQTHCSPKRHRGKLKRPPPKHRNCSVKPQNMRHKRKHKKVKNPKKKQRHPKSRRKHINGTTTTTEVTWDESTMSTMSTTTDAEFFRSATAQEATGRT

Summary

Similarity
Belongs to the heparin-binding growth factors family.
Pfam
PF00167   FGF
Interpro
IPR002209   Fibroblast_GF_fam        + More
IPR008996   IL1/FGF       
SUPFAM
SSF50353   SSF50353       
PDB
1FMM     E-value=0.000408226,     Score=98

Ontologies

Topology

Length:
173
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00034
Exp number, first 60 AAs:
8e-05
Total prob of N-in:
0.64394
inside
1  -  173
 
 

Population Genetic Test Statistics

Pi
263.958536
Theta
178.651517
Tajima's D
1.55586
CLR
0.00198
CSRT
0.8027598620069
Interpretation
Uncertain
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