Silkworm Genome Informatics Database

Gene

KWMTBOMO04106

Pre Gene Modal

BGIBMGA008732

Annotation

PREDICTED:_uncharacterized_protein_LOC106134428_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr7(-):11362889-11365806 View in EpiBrowser

Transcription factor

zf-BED

Location in the cell

Nuclear Reliability : 4.514

CDS

ATGAAGAAAGTATCATCTGTTGTGTGGCGATTTTTTGAGCGTATTGAAGAGAATAAGAGGTGCGTCTCGGTTGTGTGTAAATTGTGTGAGAATCAGTACAAATACTTCGGTAATACAACAAATCTCAGAGTACATTTGACTAATAAACATCCAATACAGTGGGAATTAACACAAAATGGGACATTGGACGAATCAAATTTTCGTTTTGAAGACGGTGATTCAATTCAATCTTCTTCAACGCCGCAGAAAAGAAAATACACACCCCGAGGAAGCAAAAATGTGAATGTGCTAGAGAACTCCGACCTGGAGGAGGAAGACAATGATGCTACAATAAATCTGGTGAAACAGATGCACGGTAGCCAACAATCTGATGAAGACTGGCTCGTTGATGATCCATACGAAATCACACACATTGAAACATACGAACCGAAACCGAAACGCAAGAAAATGAAATACAGACCGATCAAAAGAGAAGTGCAATCACCAACTGGTTTGCCAGGATTCTACGTAGCACCAAAGTCAGAGCGGAAAATAATTTATGAAGAATCTAAACGTCAGGATGAATATACAGTCTTTGGGGAGTACATCGCGAACAAACTAAGGAAGTTTAAAATGCCAAAAACACGAGGGAATCTTCAGCAGTTAATCACAACTATATTATGGCAAGCAGAGTATGGAATGTACGACAGTGCAGATTCAGTTAAACGAGTTTTAATGCATTCTGTTCAAACAAATACATCGGAGAGCTGTACAGTGGAGTTTGTTGCCCAAGACTCGATTAACGAACAAGTACTGCATGACAGTAACGAAAATCAATGTTTAGAGAGTGAGACTTTAGAAGCGGAAACCGAATAG

Protein

MKKVSSVVWRFFERIEENKRCVSVVCKLCENQYKYFGNTTNLRVHLTNKHPIQWELTQNGTLDESNFRFEDGDSIQSSSTPQKRKYTPRGSKNVNVLENSDLEEEDNDATINLVKQMHGSQQSDEDWLVDDPYEITHIETYEPKPKRKKMKYRPIKREVQSPTGLPGFYVAPKSERKIIYEESKRQDEYTVFGEYIANKLRKFKMPKTRGNLQQLITTILWQAEYGMYDSADSVKRVLMHSVQTNTSESCTVEFVAQDSINEQVLHDSNENQCLESETLEAETE

Uniprot

A0A2A4JR82 A0A2H1VYK8 A0A2A4JPX1 A0A0L7LJG9 A0A212FDF1 A0A1E1WPC1 + More
S4PLG7 A0A1E1W1E9 A0A1E1WRL1 A0A0N1PFY1 A0A194RJG0

Pubmed

26227816 22118469 23622113 26354079

EMBL

NWSH01000801 PCG74114.1 ODYU01005259 SOQ45930.1 PCG74115.1 JTDY01000879 + More
KOB75575.1 AGBW02009076 OWR51733.1 GDQN01002161 JAT88893.1 GAIX01004035 JAA88525.1 GDQN01010261 JAT80793.1 GDQN01001440 JAT89614.1 KQ459356 KPJ01291.1 KQ460075 KPJ17968.1

Proteomes

UP000218220 UP000037510 UP000007151 UP000053268 UP000053240

Pfam

PF02892 zf-BED

Interpro

IPR003656 Znf_BED + More
IPR036236 Znf_C2H2_sf

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

A0A2A4JR82 A0A2H1VYK8 A0A2A4JPX1 A0A0L7LJG9 A0A212FDF1 A0A1E1WPC1 + More
S4PLG7 A0A1E1W1E9 A0A1E1WRL1 A0A0N1PFY1 A0A194RJG0

PDB

2CT5 E-value=0.0169969, Score=88

KEGG

101738255 no KO assigned | (RefSeq) uncharacterized LOC101738255

GO

GO:0003677 GO:0046872 GO:0005515 GO:0008270 GO:0006270 GO:0042555 GO:0006260 GO:0016021 GO:0004672 GO:0048384

Length:

284

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00783

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10400

outside

1 - 284

Pi

326.163128

Theta

211.779803

Tajima's D

1.468707

CLR

0.000002

CSRT

0.781860906954652

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics