SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04101
Pre Gene Modal
BGIBMGA008607
Annotation
PREDICTED:_uncharacterized_protein_LOC106134409_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.479
 

Sequence

CDS
ATGAGTCTTATAGTAATATTCGTGTGTCTATCTAGAGTGGCAGCGGAACTGCATTCACTGCAGCATCATATGTACGTGTCCAGGAAATCAAGATCCAACTCATCACCCGTACAGTCCGGATACATGTACAGTCAAGTGGATAATTATCCTGGAACTCTCTCCTCTTTCGGGATTGGTTATGGAGGTGCTACACATAATGAGCCCGCTGTCAATGATCGTAAAACTGATGGTAACATTTATCCTCCCGAATACAATTACTATGATTCAAACGGTGATGTGAAACCAGTGATCGAAGTGACCGAACCGCCCGTTTCAAAATACGCAGCTGATTATGAAATTGCGAAAGCAGAAGCTAAATACAATAACAAGTTTTTACCATCGAAAATCGAAACTGATGCCATGTACGAAAGATTAAAATCGATGATGTATTATCACCCGCCTGAAGGCTATAAAGAAATGAACACAGGATACACCAGTCATGACTATAACTATGACGATGACGATGTTAGAACGAGTTCCAGAAGCTCTTATGATACTTGGCCATATTATTACCACAGCCCATATGAGTATGAACATATGAAAATCGAAGCTGAAATAGACAAGGCAAAGGATAAGCGGTACGCTGTTGTGCCCATAATTCCTGTACATGAAAACGTGGATGATGTGCCGCAATCTTATACTTCCATAGCTACACCGAATTATTATTCTGAAATTACAACAGAAAACCCAATGAGTGGTCACAAACCTTTCTTCTCCTTCGTTTTAAATGACTATTTTGATAAAAATAGTGCGGGTGATGCTCTTGTCTTTAAAGGAGTAGATTGGGGTAGTGAAATTGACCATGAATCACCTTACAACGACAATTATGCATATGCGAAAAGAAACAGAAGACTGGACGGTTCGACTATCAATGATGGAACTCTGGATTCTATTTTGGGGAGGGATAACGAGAAAACTGTTAAATCTAAGAATTCACACGGAGAATCAGTGACAGAGATTAGTCATGAGAAAAACAATGAATTCGATAAATATGGAAAGGGTAATCATGAGAGGGATGATTTTAAAACTGGCTATGAACACAGCGGCAATGGTTACAGAGGTTTTAAAGATTTCATTGACTCATTCTCGAATAAATTCGGCACTGAAGATCACAAAAAAGACTCGAAATATATTTTAGAGAGGAATGAAGATAAAGGTCAAAAGAAAAAAGGTTTCCGGAAAGTTTATCATAAAGACGAATATCAAGAGGAAGATGAATTTTTTGATAATAGCAATAACAGTGTGAAATCTGAAGAAAAGGGTGCTTCTAAGGCACATATCGGAGGATCGGAAGCATTGTTGCGATCCCAAGTCCTTGGGGCGGCCGGTAATGAGGCCAACGCGTTTGCAAAAACAGGCAATACCGAAAAGAAAGCCTATGAAGATAGCCATCGCGGTCATGACAATATTAAAGGTTTAGACAGTAATTATAAAAAATACAAAGACTTAGTGAAAAGTACAGACATCAGTAAACTGTCAACGTATCATTAG
Protein
MSLIVIFVCLSRVAAELHSLQHHMYVSRKSRSNSSPVQSGYMYSQVDNYPGTLSSFGIGYGGATHNEPAVNDRKTDGNIYPPEYNYYDSNGDVKPVIEVTEPPVSKYAADYEIAKAEAKYNNKFLPSKIETDAMYERLKSMMYYHPPEGYKEMNTGYTSHDYNYDDDDVRTSSRSSYDTWPYYYHSPYEYEHMKIEAEIDKAKDKRYAVVPIIPVHENVDDVPQSYTSIATPNYYSEITTENPMSGHKPFFSFVLNDYFDKNSAGDALVFKGVDWGSEIDHESPYNDNYAYAKRNRRLDGSTINDGTLDSILGRDNEKTVKSKNSHGESVTEISHEKNNEFDKYGKGNHERDDFKTGYEHSGNGYRGFKDFIDSFSNKFGTEDHKKDSKYILERNEDKGQKKKGFRKVYHKDEYQEEDEFFDNSNNSVKSEEKGASKAHIGGSEALLRSQVLGAAGNEANAFAKTGNTEKKAYEDSHRGHDNIKGLDSNYKKYKDLVKSTDISKLSTYH

Summary

Pfam
PF16009   DUF4779
Interpro
IPR031959   DUF4779       

Ontologies

GO

Topology

SignalP
Position:   1 - 15,         Likelihood:  0.780063
 
 
Length:
509
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00917999999999999
Exp number, first 60 AAs:
0.00913
Total prob of N-in:
0.00082
outside
1  -  509
 
 

Population Genetic Test Statistics

Pi
277.856369
Theta
238.75315
Tajima's D
0.528399
CLR
0.186721
CSRT
0.523473826308685
Interpretation
Uncertain
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