SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04095  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA008612
Annotation
PREDICTED:_phosphatidylinositol_4-kinase_type_2-beta_isoform_X1_[Papilio_polytes]
Location in the cell
Cytoplasmic   Reliability : 2.557
 

Sequence

CDS
ATGAGTACGGAAGAGACTCTGTTGAATCTCGATTTCGACAAACCAAACACAACAACAGCACCGCCCGATGACGGAGTGGTCTCGTTATCCAGTAGTTCAGAAGAGATTTGTTTAGTGCCAGAGGTCGAGTTCGAGGGCAATCTGGATTCTCCAGGAGTGAACCGCGAGTCGCAGCCGCTGCTTGGCGGCCGCGGCGACTTCGAAGTATCCTTCAATTACTTCCCAGATGACCCCCAGTTCAGCGAGCTGGTGCTACAGGCGGAGACGGCCATTGATAACGGCATATTCCCGGAGAGGATATATCAAGGATCCAGCGGGTCGTACTTCGTAAAAAACGCGGGCGGGAAAATCATCGGCGTTTTCAAGCCGAAAGACGAAGAGCCCTACGGTCGTTTGAACCCCAAATGGATGAAATGGATGCACAAGCTTTGCTGCCCGTGTTGCTTCGGCCGCTCCTGTCTGATCCCGAACCAGGGGTACTTGTCCGAGGCCGGTGCGAGCCTCGTAGATTCCAAAATAGGACTTAAAGTCGTGCCTAAGACTAAGGTAGTAAAATTAGTATCGGAAACGTTTAACTATCTGCGCATAGACCGAGAGAGGTCGCGTCTGAAGCGGGCCATCACCGAGCAGTTCCCGAACTTGCGATTCAACAGGATGGGGCTGCCTCCTAAGAAAGGCTCATTCCAGTTATTCGTGGAGGGCTACAAGGACGCGGACTATTGGCTCAGGAGGTTCGAGCAGGAGCCCCCGCCGCCGCACGTCATGAAGAAGTTCCAGCTGCAGTTCGAGCGGCTCGTGGTGCTGGACTACATCATCCGGAACACGGACCGCGGCAACGACAACTGGCTCATCAAGTACGAGGCGCCGCCCGGCCCGCGCGCCGACGCCGACCTGCGGGACCCCTCGGAGTGGTCGGGCGGGTGGGAGGTGCGCATCGCGGCCATCGACAACGGGCTCGCGTTCCCGTTCAAGCACCCGGACTCGTGGCGCGCCTACCCCTACCACTGGGCCTGGCTGCCGCACGCCAAGCTGCCCTTCAGCGACGAGACCAAGCAACTAGTACTTCCGCTGTTATCCGACATGAACTTCGTTCAGGAACTGTGCGACGAACTACATTTGTTGTTTAAACAAGACAAGGGCTTCGACAAGGGTCTGTTCGAGCGGCAGATGTCGGTGATGCGCGGGCAGGTGCTCAACCTCACGCAGGCCCTCAAGGACGGCAAGAGTCCCGTGCAGCTGGTGCAGATGCCGTGCGTGCTCGTCGAGAGGTAA
Protein
MSTEETLLNLDFDKPNTTTAPPDDGVVSLSSSSEEICLVPEVEFEGNLDSPGVNRESQPLLGGRGDFEVSFNYFPDDPQFSELVLQAETAIDNGIFPERIYQGSSGSYFVKNAGGKIIGVFKPKDEEPYGRLNPKWMKWMHKLCCPCCFGRSCLIPNQGYLSEAGASLVDSKIGLKVVPKTKVVKLVSETFNYLRIDRERSRLKRAITEQFPNLRFNRMGLPPKKGSFQLFVEGYKDADYWLRRFEQEPPPPHVMKKFQLQFERLVVLDYIIRNTDRGNDNWLIKYEAPPGPRADADLRDPSEWSGGWEVRIAAIDNGLAFPFKHPDSWRAYPYHWAWLPHAKLPFSDETKQLVLPLLSDMNFVQELCDELHLLFKQDKGFDKGLFERQMSVMRGQVLNLTQALKDGKSPVQLVQMPCVLVER

Summary

EMBL
NWSH01000139    PCG79163.1    KQ460075    KPJ17956.1    KQ459582    KPI98718.1    + More
GAIX01005616    JAA86944.1    ODYU01006604    SOQ48593.1    APGK01021327    APGK01021328    KB740314    KB631743    ENN80890.1    ERL85729.1    DS497724    EFA12949.1    BT127090    AEE62052.1    GEZM01092329    JAV56595.1    GFDF01006582    JAV07502.1    GFDF01006580    JAV07504.1    GFDF01006579    JAV07505.1    NEVH01013241    PNF29535.1    GDAI01000651    JAI16952.1    PNF29536.1    NNAY01000459    OXU28245.1    AAZX01006908    CH477301    EAT44260.1    DS232534    EDS43125.1    GFDL01010533    JAV24512.1    GFDL01010685    JAV24360.1    GFDL01010297    JAV24748.1    PNF29537.1    KK852478    KDR23003.1    KQ434892    KZC10553.1    KQ414940    KOC59182.1    AXCM01000405    AXCM01000406    ATLV01020424    KE525302    KFB45281.1    AXCN02000061    KQ435710    KOX79807.1    KQ777939    OAD52034.1    GEDC01027905    JAS09393.1    GDRN01054073    JAI66121.1    KZ288287    PBC29398.1    GL441481    EFN64759.1    LBMM01003198    KMQ93817.1    GL888284    EGI63283.1    GL763289    EFZ19898.1    KQ976532    KYM81639.1    ADTU01026286    KQ976780    KYN08377.1    GDIP01053469    GDIQ01084709    JAM50246.1    JAN10028.1    KQ980298    KYN16842.1    GDIQ01021291    JAN73446.1    KQ981512    KYN40859.1    GL449414    EFN82766.1    GDIQ01121895    JAL29831.1    GDIP01145992    GDIQ01210509    GDIQ01145341    GDIP01099937    LRGB01000190    JAK41216.1    JAM03778.1    KZS20443.1    KK107323    QOIP01000002    EZA52607.1    RLU25557.1    GECU01029252    GECU01023962    JAS78454.1    JAS83744.1    GGMR01011483    MBY24102.1    GFXV01006548    MBW18353.1    GGMS01012166    MBY81369.1    ABLF02034412    UFQS01000027    UFQT01000027    SSW97758.1    SSX18144.1    SSW97757.1    SSX18143.1    KQ983238    KYQ46356.1    GDRN01054072    JAI66122.1    LJIJ01001315    ODM92158.1    GFPF01010547    MAA21693.1    GEDV01010626    JAP77931.1    PZQS01000005    PVD29409.1    GACK01000859    JAA64175.1    GDRN01054071    JAI66123.1    GDRN01054074    JAI66120.1    GEFH01001863    JAP66718.1    JH430212    JO840997    AEO32614.1    GADI01005113    JAA68695.1    GBBM01006694    JAC28724.1    GFAC01002284    JAT96904.1    GBBK01002497    JAC21985.1    LNIX01000020    OXA43950.1    GDIQ01228047    JAK23678.1    QCYY01003717    ROT62363.1    GBZX01001337    JAG91403.1    GGLE01005971    MBY10097.1    GDIQ01119091    JAL32635.1    GFWV01007080    MAA31810.1    AYCK01001663    GBYX01181294    JAO85799.1    GECU01014891    JAS92815.1    DS235751    EEB16325.1    GCES01162156    JAQ24166.1   
Pfam
PF00454   PI3_PI4_kinase        + More
PF03540   TFIID_30kDa
Interpro
IPR039756   Lsb6/PI4K2        + More
IPR000403   PI3/4_kinase_cat_dom       
IPR003923   TFIID_30kDa       
IPR018936   PI3/4_kinase_CS       
PDB
4HNE     E-value=3.54862e-127,     Score=1165

Ontologies

Topology

Length:
423
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00206
outside
1  -  423
 
 

Population Genetic Test Statistics

Pi
256.346928
Theta
147.116929
Tajima's D
2.413733
CLR
0.122767
CSRT
0.935903204839758
Interpretation
Uncertain
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