Gene

KWMTBOMO04091

Pre Gene Modal

BGIBMGA008614

Annotation

PREDICTED:_nischarin_[Amyelois_transitella]

Location

Bomo_Chr7(-):11025996-11029819      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.442 Nuclear   Reliability : 2.022

CDS

ATGTCTTCATTTTTAAAATATCACGAAAATAGTTCAGTAGGCGTTGACGAGGCTACAATAAAAGACAATGTTACGTATTACAAAATTAAAGTCAAAGTGGGTTCCGTTAATTGGCATGTAATGCATCGATACAACGATTTTGTGGAGCTTCACGATAAACTCGTATCAGACCATGGTGTTGGAAAGGAATTACTTCCGCCTAAAAAAGTTATACGAAATAAGACTCCTAAGTTTGTGGAACAAAGACGCGAAGCATTGAATGTGTATCTGAAGGAAGTGCTAAACTATTTAAAATTATCCATGCCGTATGAATTCGCGCACTTTTTAGATTTTCATAAATACGATATTTTCTTTTTATTAACCGACTTAGCGAAGACTTTGTATTTGGAAGGTGATAATTTGTTGGAGAATGCAAAATCTTATAAGTTCACGCCTCTTGAGTTGCATGCGATTAGTGAAAGACTAAAAATGGCGTGTCCTCCAACAGAGAAACAAGATCAAACATATGATTTCAGCCATGTCTTAGACTTCTGTTCACAACTTCGCTCATTGGACGTTGAAGGAAGCTATGAAAAATATGGCACAAGCAACATAATACTAAATGAGTTACAATTTGATTTCATTCCCTTCAAGTCCTTGGTTAACTTAAGGATACTAGGAGTTCCCATGAGATGCATACAGAGTGTTGGTAGTCTACGGGACACCCTAGTCAACCTGTCAGTATTAACGGCCACAGTAATCTCTCTGAATGAATTTCTATTAGTTGACATCCTGCATAAAGAACCATCGAGTATTGCTGATACAGTGAAATGGAAGAAACTCGCGATGATAAACTTCGGTAACAACAACATTGAAAATGTCGATTGGGCTATCAAATTGGTCCCAAGACTTCAGCACCTGAGTCTCTCGTCAAACAAACTCAAAGAGCTTTGTGACATATCAAGCCTTCACGAACTAAGGATATTAGATTTGTCCATGAACTCGTTTTCGCTCTGTGAGAAGTGGCACGCTAAAATAGGTAACGTAGTAAAAATAGAACTATCACAGAATAAGGTTGAATCGCTACGTGGGTTTTCCAGACTCTATTCTTTAGAGAGTTTAAATTTAGGCTGTAATGTTATAACGGATGTTGAAGAGGTCCAGCATATATGTAAATTACCTTGCTTAGAGTATCTATGGCTGACGGCGAATCCCGTTGCCTCGATCATAGATTATAGAGTTAAAGTCATAGAGCAATTCAACTCTAGAATGTCCGAAATCTGTTTGGATAACGAGCGAGCTTCTGAGAAAGAACTAGACACGGCTAGGGTTTTGCAAGCATTGAGGGTGGTTAAAGAAGGTAAAATACCTACTTTCCTAGACAATCATACCAGTCATAGTTTTAATAAAAGTTGA

Protein

MSSFLKYHENSSVGVDEATIKDNVTYYKIKVKVGSVNWHVMHRYNDFVELHDKLVSDHGVGKELLPPKKVIRNKTPKFVEQRREALNVYLKEVLNYLKLSMPYEFAHFLDFHKYDIFFLLTDLAKTLYLEGDNLLENAKSYKFTPLELHAISERLKMACPPTEKQDQTYDFSHVLDFCSQLRSLDVEGSYEKYGTSNIILNELQFDFIPFKSLVNLRILGVPMRCIQSVGSLRDTLVNLSVLTATVISLNEFLLVDILHKEPSSIADTVKWKKLAMINFGNNNIENVDWAIKLVPRLQHLSLSSNKLKELCDISSLHELRILDLSMNSFSLCEKWHAKIGNVVKIELSQNKVESLRGFSRLYSLESLNLGCNVITDVEEVQHICKLPCLEYLWLTANPVASIIDYRVKVIEQFNSRMSEICLDNERASEKELDTARVLQALRVVKEGKIPTFLDNHTSHSFNKS

Uniprot

A0A2A4K659   A0A2H1W4X1   A0A194PLH6   A0A3S2M276   A0A212FDQ4   A0A0L7LE82   + More
A0A2J7PX91   A0A067QG80   A0A194RR69   A0A2A3EM17   A0A1Y1LJB0   E2A8U6   A0A088APJ0   A0A154PSX3   E2BI34   A0A026WMD1   A0A1B6DLI2   A0A0C9RZ73   A0A310SIV3   A0A0L7R6G6   A0A151JTE2   A0A158NWD5   F4WLP4   A0A1B6KK81   A0A151I5A7   A0A195EC84   A0A232EJZ8   E9IW13   A0A151IA37   W5JQL5   A0A151WY50   A0A3R7NWU7   A0A182NPJ0   A0A182KFF1   K7ITW2   Q7Q2Y3   A0A182WG17   A0A182V9A0   A0A182U1A8   A0A182PUS4   A0A0M9A3A2   A0A182YD84   A0A182QV30   A0A182TC30   A0A182RQT4   A0A182ISH3   E0VKE3   A0A084WB04   A0A0J7KI95   A0A1W4XB04   J3JZ90   A0A182GQ89   A0A182HEK0   Q17GY6   Q17GY5   A0A182FVR6   A0A182LPS6   A0A1Q3FBC3   B0W7E2   A0A182MPK8   B4LLM3   A0A2P8Z0N0   A0A182XEB9   A0A182HNR3   B4KP18   A0A1A9W7S9   Q290Z5   A0A2H8TUH9   A0A1A9VVL6   A0A1A9Z5E8   A0A1B0G5C4   A0A2S2NZJ6   B3MGK6   A0A1B0C217   A0A1B6MMQ2   A0A1A9YFK4   A0A1W4W0Y5   A0A3B0J4E1   J9K1G6   A0A1I8PRF5   A0A0L0CMD8   D6W751   A0A1I8MN52   B4P7U0   A0A1B6JWI9   B3NQN2   Q7K490   B4HRU1   B4QGE1   B4MP65   A0A226E6G6   A0A034VRE2   A0A131XZS8   A0A336M6X0   A0A1S3CXJ3   V4B568   A0A1D2MWG9   A0A0K8TR88  

Pubmed

26354079    22118469    26227816    24845553    28004739    20798317    + More
24508170    30249741    21347285    21719571    28648823    21282665    20920257    23761445    20075255    12364791    25244985    20566863    24438588    22516182    26483478    17510324    20966253    17994087    29403074    15632085    26108605    18362917    19820115    25315136    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    25348373    23254933    27289101    26369729   

EMBL

NWSH01000139    PCG79150.1    ODYU01006333    SOQ48087.1    KQ459600    KPI94291.1    + More
RSAL01000067    RVE49312.1    AGBW02009024    OWR51843.1    JTDY01001508    KOB73700.1    NEVH01020859    PNF20958.1    KK853502    KDR07128.1    KQ459995    KPJ18536.1    KZ288219    PBC32322.1    GEZM01054353    GEZM01054352    JAV73739.1    GL437663    EFN70175.1    KQ435066    KZC14358.1    GL448433    EFN84660.1    KK107154    QOIP01000001    EZA56821.1    RLU27590.1    GEDC01010759    JAS26539.1    GBYB01014715    JAG84482.1    KQ762237    OAD56010.1    KQ414648    KOC66341.1    KQ981972    KYN31652.1    ADTU01002962    GL888212    EGI64872.1    GEBQ01028131    JAT11846.1    KQ976434    KYM87179.1    KQ979074    KYN22833.1    NNAY01003906    OXU18677.1    GL766449    EFZ15198.1    KQ978245    KYM96027.1    ADMH02000621    ETN65593.1    KQ982651    KYQ52814.1    QCYY01002618    ROT68941.1    AAAB01008966    EAA13000.4    KQ435750    KOX76390.1    AXCN02002104    DS235243    EEB13859.1    ATLV01022298    KE525331    KFB47398.1    LBMM01007202    KMQ89941.1    BT128571    AEE63528.1    JXUM01080104    KQ563165    KXJ74360.1    JXUM01005577    KQ560195    KXJ83890.1    CH477254    EAT45939.1    EAT45938.1    GFDL01010247    JAV24798.1    DS231853    EDS37857.1    AXCM01001977    CH940648    EDW60886.1    PYGN01000253    PSN50056.1    APCN01001971    CH933808    EDW10084.1    CM000071    EAL25217.3    GFXV01005023    MBW16828.1    CCAG010020998    GGMR01009986    MBY22605.1    CH902619    EDV35749.2    JXJN01024308    GEBQ01002749    JAT37228.1    OUUW01000001    SPP74292.1    ABLF02035268    JRES01000195    KNC33372.1    KQ971307    EFA11508.2    CM000158    EDW91116.1    GECU01004174    JAT03533.1    CH954179    EDV55942.1    AE013599    AY052088    AAF58166.1    AAK93512.1    CH480816    EDW47955.1    CM000362    CM002911    EDX07179.1    KMY93915.1    CH963848    EDW73904.1    LNIX01000006    OXA53215.1    GAKP01013913    JAC45039.1    GEFM01004146    JAP71650.1    UFQS01000641    UFQT01000641    SSX05657.1    SSX26016.1    KB203629    ESO83609.1    LJIJ01000446    ODM97407.1    GDAI01000716    JAI16887.1   

Proteomes

UP000218220    UP000053268    UP000283053    UP000007151    UP000037510    UP000235965    + More
UP000027135    UP000053240    UP000242457    UP000000311    UP000005203    UP000076502    UP000008237    UP000053097    UP000279307    UP000053825    UP000078541    UP000005205    UP000007755    UP000078540    UP000078492    UP000215335    UP000078542    UP000000673    UP000075809    UP000283509    UP000075884    UP000075881    UP000002358    UP000007062    UP000075920    UP000075903    UP000075902    UP000075885    UP000053105    UP000076408    UP000075886    UP000075901    UP000075900    UP000075880    UP000009046    UP000030765    UP000036403    UP000192223    UP000069940    UP000249989    UP000008820    UP000069272    UP000075882    UP000002320    UP000075883    UP000008792    UP000245037    UP000076407    UP000075840    UP000009192    UP000091820    UP000001819    UP000078200    UP000092445    UP000092444    UP000007801    UP000092460    UP000092443    UP000192221    UP000268350    UP000007819    UP000095300    UP000037069    UP000007266    UP000095301    UP000002282    UP000008711    UP000000803    UP000001292    UP000000304    UP000007798    UP000198287    UP000079169    UP000030746    UP000094527   

PRIDE

Q7K490   

Pfam

PF00787   PX        + More
PF13855   LRR_8
PF12799   LRR_4

Interpro

IPR032675   LRR_dom_sf        + More
IPR036871   PX_dom_sf       
IPR001683   Phox       
IPR001611   Leu-rich_rpt       
IPR003591   Leu-rich_rpt_typical-subtyp       
IPR025875   Leu-rich_rpt_4       
IPR037904   Nischarin_PX       
IPR016024   ARM-type_fold       
IPR033060   INTS7       

SUPFAM

SSF64268   SSF64268        + More
SSF48371   SSF48371       

Gene 3D

3.30.1520.10     3.80.10.10    

CDD

cd06875  PX_IRAS

ProteinModelPortal

A0A2A4K659   A0A2H1W4X1   A0A194PLH6   A0A3S2M276   A0A212FDQ4   A0A0L7LE82   + More
A0A2J7PX91   A0A067QG80   A0A194RR69   A0A2A3EM17   A0A1Y1LJB0   E2A8U6   A0A088APJ0   A0A154PSX3   E2BI34   A0A026WMD1   A0A1B6DLI2   A0A0C9RZ73   A0A310SIV3   A0A0L7R6G6   A0A151JTE2   A0A158NWD5   F4WLP4   A0A1B6KK81   A0A151I5A7   A0A195EC84   A0A232EJZ8   E9IW13   A0A151IA37   W5JQL5   A0A151WY50   A0A3R7NWU7   A0A182NPJ0   A0A182KFF1   K7ITW2   Q7Q2Y3   A0A182WG17   A0A182V9A0   A0A182U1A8   A0A182PUS4   A0A0M9A3A2   A0A182YD84   A0A182QV30   A0A182TC30   A0A182RQT4   A0A182ISH3   E0VKE3   A0A084WB04   A0A0J7KI95   A0A1W4XB04   J3JZ90   A0A182GQ89   A0A182HEK0   Q17GY6   Q17GY5   A0A182FVR6   A0A182LPS6   A0A1Q3FBC3   B0W7E2   A0A182MPK8   B4LLM3   A0A2P8Z0N0   A0A182XEB9   A0A182HNR3   B4KP18   A0A1A9W7S9   Q290Z5   A0A2H8TUH9   A0A1A9VVL6   A0A1A9Z5E8   A0A1B0G5C4   A0A2S2NZJ6   B3MGK6   A0A1B0C217   A0A1B6MMQ2   A0A1A9YFK4   A0A1W4W0Y5   A0A3B0J4E1   J9K1G6   A0A1I8PRF5   A0A0L0CMD8   D6W751   A0A1I8MN52   B4P7U0   A0A1B6JWI9   B3NQN2   Q7K490   B4HRU1   B4QGE1   B4MP65   A0A226E6G6   A0A034VRE2   A0A131XZS8   A0A336M6X0   A0A1S3CXJ3   V4B568   A0A1D2MWG9   A0A0K8TR88  

PDB

3P0C     E-value=4.27865e-17,     Score=216

KEGG

101746292    no KO assigned | (RefSeq) nischarin-like

GO

GO:0035091   GO:0005178   GO:0005737   GO:0019901   GO:0016180   GO:0032039   GO:0007229   GO:0005515   GO:0009055   GO:0020037   GO:0006270   GO:0042555   GO:0006260   GO:0016021   GO:0004672   GO:0048384  

PANTHER

PTHR13322  

Length:

464

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03933

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00432

outside

1  -  464

 

 

Pi

24.945332

Theta

199.133225

Tajima's D

-1.218066

CLR

1484.368051

CSRT

0.102894855257237

Interpretation

Uncertain