Silkworm Genome Informatics Database

Gene

KWMTBOMO04085

Annotation

PREDICTED:_uncharacterized_protein_LOC105386148_[Plutella_xylostella]

Location

Bomo_Chr7(+):10925926-10927322 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.886

CDS

ATGCCTAAAGATCGACAGAGATACGACGAAGACGCACCACTGGTTTCCAATCAGAGTTTGATGTACGTAGAAGAGGCGATTCCGAAGTTTTCCGGTAACGATGCGTCCTACACAGCGACAAAATGGGCACAAGAAGTGGAGGATAACACAGAGATTTTCGATTTAACTCCAATCCAGCAGCTACTTATCGCCAGGCGAACTTTGACTTCTACTGCAGCGGCGTGGCTCCGTACTGAGAAAACCTTTAAGAGCTACGATGATTTGAAAGCGGCATTATTCAAAGAGTTTCCAGATGTTATCAATACTAAAGAAATCCACGAAATGATGAGTGAACGGAAAAAACGCAAGGACGAAAGTTGTTACGATTACATGCTCGAAATGAAGGCACTGGGCAAGCGAGGAAGGTTAGCCGACTATGTGGCTATTCAATATATTATAGAAGGCATACTCGATCGCGAGACTAACAAGATCATGCTATACGGCGTTACGACTTACCCTGAACTGAAAGAAAAACTAAAGTTATACGAGACATTTAAGACTAGCATCAAGAAAGAATATACCAAAACCAGTTCAAGTTCCAGCAGCGGCGAAGAAAGTCGTTATAGAAAGCAAGGTCGTCCAGCGGCGGCGGTGCGTTGTTTTAGCTGTGGGAAAATGAATCATATATCTGCGGAGTGTCCAGATCGTGAAAAAGGACTAAAATGCTTCCGATGTAATGAATTCGGACATATTGCATCACATTGTAAGAAGAGCATTAACAATGTGAAGTCAGCAACAAATCGAGTGTCGGCAAAACAGTACGAGTCTAGTGGCGCCGCGAGTGGAGGATTCGGTAAACCGGCGTCGGCAAAGCAGTTCTGTGCGCAGAGACAATCTGCGGAGTGTTCGTGTCAAGATGGCGGGGGCGACGGCCTATCGCAGAGCGACTACGTGCGGCCATCTTCCAGCAAAGATGTCTTGGCAGCTGTCAAGCCTGTCAATTCCGATTCAGACTCGGACGTAAATAAAAACAATGACGAACAGCAAAACCAGAAAAGATCGTTGAAAAATGTGTTAATTTGCGGTAAAAACGTTACCAGTTTAATTGATAGCGGCAGTGACTTAAATTTAGTGTCCGTAGGACTATTTTTCGAACTGGGAATCGGACAATTGGGAAAAGACGATATGATGTTTACAGGCCTAGGTGGCAAGCAGGTGTCTCGGTTTTCTAAATTTTCTCCTACGACGACAATAGCCACTTCATCAATTGTTGGCGCATTAAAACGTCCAGCATGTTGTCCTGCAGGCGCCTTATCGGCTCTGATGACAATTTTATGA

Protein

MPKDRQRYDEDAPLVSNQSLMYVEEAIPKFSGNDASYTATKWAQEVEDNTEIFDLTPIQQLLIARRTLTSTAAAWLRTEKTFKSYDDLKAALFKEFPDVINTKEIHEMMSERKKRKDESCYDYMLEMKALGKRGRLADYVAIQYIIEGILDRETNKIMLYGVTTYPELKEKLKLYETFKTSIKKEYTKTSSSSSSGEESRYRKQGRPAAAVRCFSCGKMNHISAECPDREKGLKCFRCNEFGHIASHCKKSINNVKSATNRVSAKQYESSGAASGGFGKPASAKQFCAQRQSAECSCQDGGGDGLSQSDYVRPSSSKDVLAAVKPVNSDSDSDVNKNNDEQQNQKRSLKNVLICGKNVTSLIDSGSDLNLVSVGLFFELGIGQLGKDDMMFTGLGGKQVSRFSKFSPTTTIATSSIVGALKRPACCPAGALSALMTIL

Uniprot

A0A2A4JH77 A0A2H1VAI8 A0A182W804

EMBL

NWSH01001586 PCG70783.1 ODYU01001505 SOQ37806.1

Proteomes

UP000218220 UP000075920

Pfam

PF00098   zf-CCHC        + More
PF17921   Integrase_H2C2
PF03732   Retrotrans_gag

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR036875   Znf_CCHC_sf
IPR001878   Znf_CCHC
IPR001969   Aspartic_peptidase_AS
IPR001995   Peptidase_A2_cat
IPR005162   Retrotrans_gag_dom
IPR036397   RNaseH_sf
IPR041588   Integrase_H2C2
IPR012337   RNaseH-like_sf

SUPFAM

SSF50630   SSF50630        + More
SSF57756   SSF57756
SSF53098   SSF53098

Gene 3D

2.40.70.10 3.30.420.10

ProteinModelPortal

A0A2A4JH77 A0A2H1VAI8 A0A182W804

PDB

5A9E E-value=0.00703019, Score=93

KEGG

NA

GO

GO:0003676 GO:0008270 GO:0004190 GO:0009055 GO:0020037 GO:0006270 GO:0042555 GO:0006260 GO:0016021 GO:0004672 GO:0048384

Length:

438

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03584

Exp number, first 60 AAs:

0

Total prob of N-in:

0.02628

outside

1 - 438

Pi

224.807748

Theta

189.254412

Tajima's D

0.586356

CLR

0.025893

CSRT

0.540322983850807

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree