SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04083
Annotation
PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.998
 

Sequence

CDS
ATGTCCAGCCTGAAAAAGTTATTACCCCAGGAGGGTACCTCTTGCTCTGCGGGAGGAGAATCCCTCCGTGCGGTCGAGAAATCGGCCGCACGCTGCCCCTCGTATTCTGGGGGGGGCACAAGCTGTTCCGGGAAAGAGTCCGAGAAGGACGGGGAGAAAAGGAAGAGGTCCACAAGGGACGAAAGAGAAACGGTGCAAAACGAAGACCGCAGGAGAGAAAGCAGCGTTTGCTCGGAGGACAGCATGGTGGTCAGCTCCTGCTGTTTATCACCAAAGAGAACGACGCGCAAAAGGGCAAAAGGCTCGAAGAACGCAAGCTCCGACAGCAGTACCGAATCGGAGGCGTCTAGGTCAGGATCGTTGGTGTCCAGGACCAGACCATCGAAGAGAGGCCGAGGTCGTCCTCCAACGACCGGCCAATACGTGGGATTGGCGGCGGCGAAGCAGGCATACTTAAAAGCTCAACGTGAAGAGCTGGAGCTTCGCGCTGAACAGGAGGTAGTAGAAAGCGTGCACAACCTGCGTGAGAAGAGGCGCGCAGTACATTTAATATCCGGGAACATAACAGCAGATCCCGCGACTAGGCTCCAGGAGACCGCCCAGATGGCCCTTACCATCGCGGCGAAAGCGCGCAACCCGAAGGGGACGTACATCAAAGCCCTTAAGGAGATGGCCACAACAATAAAGGAGGCCACGGAAGATCTAGCTTCCAGATCGGCCAACGAGGAAACCCTGAGGCTGCAGGCACTCAGCGAGAGACAGGAGGCGGAGATCCTGCAGCTCAGGAAGGAAGTAGAGGACGTAAGAGCGGAAATGGTGCGCCTCGCTCAGACGACAGCGCAGCCCACTCCCGCCCCAACACTGCCAAACGAAGACGACGAGCGACGCCTGCAGATAATCATGCGAGCAGTCGGGTCCATGCTGGACGCCCGACTCGCGGGTCTGGAGGCCCGTCTACTCCCAGAGCCTCGCTTGCGACCACCTTTGGCCGCTGACGCAAGAAGGAGGAGCAGAGAGAGCGAAATCGATCCAGACACTGCAGGTCTTGTGTCGGAGGCAACGCCGCCTTATGCGGCTCTGCCCCAGCTTGAGACCAACAAGAAAGTGAAGCCCAAGAAACAGAAGGGCAATAACAAGAAGACGACGCCGTCAGCTCCACCCGAGCCGGCAGCTCCACCCGAGCCGCGCGCATTCCCTCCGGCCCCCGCTGCCCTTACGGTCAGTTGGGCGACCGTTGCGCGTAGAGGAGCACGGCCGAGAAGGGAAAAGGAGCCAGCACCGACGACCAACGCGGAAGGCCAACGAGACAGAAACCCTGCCCCGCTCAAGCCTAAGAAGAAAGGTAGAAAGAAGAGACTTCGAGCTCCGCGCTCGCAGGCCGTTATTCTGAGGCTGCACCCGGAGGCCATCGAAAAGGGGCTCTCCTACCGGGAGGTGCTCGCCGAGGCGAGGGCCAGCATCGACGCCGGAGCCTTAGGGATCCCCATCGAGAAGGTCCGGTCAGCAATAACCGGAGCCAAAATACTCATAGTGAGCGGCGAGGACCAGATCGCGAAGGCCGACTTGCTGGCCGAGAAGCTCAAGGAGGTTCTCTCTTCTAAGAGAGTAACGGTGACAAGACCGATAGTGACCGCTGCAATCCGCATAAGCGGACTTGACGATTCGCTGACGGAGGAGGAGATATGCACCGAGCTTGCGCGCATCGGCGATTGCTCCGTCGATGCAGTCAAGGCTGGCTCTATCAAGCCCGGATCCGGAGGAATGGGCCAGGTTCTCGTTCGTTGCCCGATAGCAGCGGCGAAGAAAATTGTTACAGTGACGAAGCTGCGCATCGGGTGGAGCGTTGTTCGCGTCCACCTGCTGGAGGCCCGGAGGCTACAATGCTTCCGCTGCCACGCGTTGGGCCATGTGGGTGCGCGGTGCCCGTCGTCGGTCGACCGCAGCCACGACTGCTACCGGTGCGGACAGACCGGCCACGTGGCATCCGGATGCACACTGGCACCGCGATGCGCCGTCTGCGCCTCCGCCGGGAAACCAGCGGACCACACTTCGGGGGGCAAGGCCTGTGCAAGGCCCCCGAGAAAACCGAGGAGAGAGGACGTCGCTGCACCCGCGGCCGCACCCGTTGCTGCAGACCGAAGTCAACTCGGCGAGACGACGACTCCGATGGACGTCCAGCCTCCGTCGGGCACAAGGAAGACCGGGGCTTTATGA
Protein
MSSLKKLLPQEGTSCSAGGESLRAVEKSAARCPSYSGGGTSCSGKESEKDGEKRKRSTRDERETVQNEDRRRESSVCSEDSMVVSSCCLSPKRTTRKRAKGSKNASSDSSTESEASRSGSLVSRTRPSKRGRGRPPTTGQYVGLAAAKQAYLKAQREELELRAEQEVVESVHNLREKRRAVHLISGNITADPATRLQETAQMALTIAAKARNPKGTYIKALKEMATTIKEATEDLASRSANEETLRLQALSERQEAEILQLRKEVEDVRAEMVRLAQTTAQPTPAPTLPNEDDERRLQIIMRAVGSMLDARLAGLEARLLPEPRLRPPLAADARRRSRESEIDPDTAGLVSEATPPYAALPQLETNKKVKPKKQKGNNKKTTPSAPPEPAAPPEPRAFPPAPAALTVSWATVARRGARPRREKEPAPTTNAEGQRDRNPAPLKPKKKGRKKRLRAPRSQAVILRLHPEAIEKGLSYREVLAEARASIDAGALGIPIEKVRSAITGAKILIVSGEDQIAKADLLAEKLKEVLSSKRVTVTRPIVTAAIRISGLDDSLTEEEICTELARIGDCSVDAVKAGSIKPGSGGMGQVLVRCPIAAAKKIVTVTKLRIGWSVVRVHLLEARRLQCFRCHALGHVGARCPSSVDRSHDCYRCGQTGHVASGCTLAPRCAVCASAGKPADHTSGGKACARPPRKPRREDVAAPAAAPVAADRSQLGETTTPMDVQPPSGTRKTGAL

Summary

Uniprot
ProteinModelPortal

Ontologies

Topology

Length:
737
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00081
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00004
outside
1  -  737
 
 

Population Genetic Test Statistics

Pi
0
Theta
0
Tajima's D
0
CLR
14.858829
CSRT
0
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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