SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04077
Pre Gene Modal
BGIBMGA008624
Annotation
PREDICTED:_uncharacterized_protein_LOC101744700_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.244
 

Sequence

CDS
ATGGCACAAGTAGAACAGCCGATTTTCATACTTCCGAAAAAGCGGAATGGCAAAAAAGCCAACGCAGTGGCTAGCCATGTCGACCACGTAATTGCGATACAGGGTGTTCCGGACAATACATTTCCGGTGAAATACACGAGCGGCCTATCACCGGTGTCTGAACACACTGCGAACGGTGTCATTCATTCCACTATGGAAGGCATCAAATCAAACATGAAAATACACTTACCCATCATCAATGATGAAATTGATGAGGAGCTTGAGTCAACTGAAACAGACGTTCAAAAGCAACCACATAAGAATGGCTACCAAGCCCTATGTAACATAAATGGCAGCCGTGAAATCATAGACTTGTCACCAATATATGAAAATTCCTCAGATGCGTGCTCAAGCCACGGCGATTTGAGAGAAACCAATGAGTATGAATTACAAAAGAACTGCAAAATCTTTATTGGTGAGCAATATGAGAGTTCATGCCCAACACCAAATAGTCTGTCTCAAACACAGTCTGAAAACAGTTTTGAAATGGGCCCGTTGACTGACAGCTTGAAAAACAGTGCAAAGAAGAAGAAAAAAGTGAATATTGTTGCCGGAGTCGCTGAATATGAGAACACAGCTGCAGAAAATACTGCATCAAAACTAGAATCTGAAGGGCCAGTTACACCTGAATGCTCCTTGACAGAATTTAAAGATGGCTACTTGGCTATGACTGGCACAATTAAAAGAGTGATCTTCACCATTGGCCTTGGATTATACGCAGGAATCGTACAGCTCACATTCAGCGCCGGTAACTGGTGGAAGGATGTATGTGATTTTGAGAAAGGCTACTATGGTTGGCTCTGTAATATGTTAAGCTTGTCAGAGTGTAGTCCTTATGAGGTTGTGGTCTTAATGGACGTAAAACCATAA
Protein
MAQVEQPIFILPKKRNGKKANAVASHVDHVIAIQGVPDNTFPVKYTSGLSPVSEHTANGVIHSTMEGIKSNMKIHLPIINDEIDEELESTETDVQKQPHKNGYQALCNINGSREIIDLSPIYENSSDACSSHGDLRETNEYELQKNCKIFIGEQYESSCPTPNSLSQTQSENSFEMGPLTDSLKNSAKKKKKVNIVAGVAEYENTAAENTASKLESEGPVTPECSLTEFKDGYLAMTGTIKRVIFTIGLGLYAGIVQLTFSAGNWWKDVCDFEKGYYGWLCNMLSLSECSPYEVVVLMDVKP

Summary

Pfam
PF15052   TMEM169
Interpro
IPR029386   TMEM169       

Ontologies

Topology

Length:
302
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.94851
Exp number, first 60 AAs:
0.00147
Total prob of N-in:
0.33569
outside
1  -  243
TMhelix
244  -  266
inside
267  -  302
 
 

Population Genetic Test Statistics

Pi
170.678584
Theta
177.09745
Tajima's D
-0.494787
CLR
391.284769
CSRT
0.243237838108095
Interpretation
Uncertain
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