Gene

KWMTBOMO04075

Annotation

PREDICTED:_F-box/LRR-repeat_protein_7_[Amyelois_transitella]

Location

Bomo_Chr7(-):10741217-10753635      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.01

CDS

ATGGACGCCAGGACCCTGGCGCCACTCGTCACTGACTTAGTGGACCTTAGACATATTGATTTAACGGGTTGCCCGCACGTGGATTGGCCGGAGTGGTCCTGTCTTGAGACCCGACTGGGCGATCGGAGGCCTCCAGTCGAGTACATTGACCTCACTGACTGCGGGTCGGTGACCGACGCTGGCCTTTGTGCTTTGCTCCACACCTGTCCGTCTCTCCAGTACTTGTACTTGCGGAGATGTAGTCTAGTCACAGATGCCGGAGTGAGATGGATCCCTTCGTATTGTGCTCTCAAAGAGCTTAGTGTCTCCGACTGTACCGGAGTCACGGACTTCGGGCTTTACGAGCTAGCGAAGCTGGGTCAAGCCCTACGTTACCTTTCTGTCGCCAAGTGTACGCAGGTGTCGGATTCAGGGATCCGTACTCTGGCCCGTCGGTGCTATAAGCTTCGGTATCTGAACGCGCGTGGCTGTGGAGCTTTGGGCGATGATGGAGTGGAAGCTGTAGCCAGGGGTTGCTCCCGACTGCGAGCTTTAGACCTTGGTGCTACTGACGTTTCCGAAGCCGGATTGCAAATTTTAGCACGATGCTGTCCAAACCTGAAGAAGTTAGCCCTCAGGGGCTGCGAGCTGGTCGGTGATGATGGCTTAGAAGCAGTCGCGTACTACTGCCGCGGGCTCACACAGCTCAACATTCAGGATACACCGGTTACCATCAGAGGATACAGAGCCGTCAAGAAATATTGCAAACGATGTGTCATTGAACACACCAATCCTGGTTTTTGCTGA

Protein

MDARTLAPLVTDLVDLRHIDLTGCPHVDWPEWSCLETRLGDRRPPVEYIDLTDCGSVTDAGLCALLHTCPSLQYLYLRRCSLVTDAGVRWIPSYCALKELSVSDCTGVTDFGLYELAKLGQALRYLSVAKCTQVSDSGIRTLARRCYKLRYLNARGCGALGDDGVEAVARGCSRLRALDLGATDVSEAGLQILARCCPNLKKLALRGCELVGDDGLEAVAYYCRGLTQLNIQDTPVTIRGYRAVKKYCKRCVIEHTNPGFC

Uniprot

A0A2H1WTX9   A0A2A4JCI9   A0A3S2L2K0   A0A194RM70   A0A212EJ22   A0A194PNI3   + More
A0A0L7LJH0   A0A182YS30   A0A084VE28   A0A1B6L5J8   A0A182K6J4   A0A1B6J157   Q174S4   A0A146LBE7   A0A182H6H3   A0A182H9L4   B0W6A3   A0A1B6GCC1   A0A182FSG1   A0A1S4FEL5   A0A182QLY2   A0A023F4W8   W5JD73   A0A182LCQ7   A0A182IVD7   T1HE01   A0A182TZ93   A0A182VP95   A0A182X1Y2   Q7QKJ7   A0A182HJE9   A0A182P5S2   D7EJI1   A0A182N553   A0A182RHX3   N6T2F3   U4UN84   A0A1W4VW27   B3M394   B4HLG3   B4QXS9   B4PRI6   A0A2H8U022   B3P3X3   Q9VF10   A0A067QT01   A0A2S2NT69   A0A2P8YL58   X1WJE5   A0A1S3DGC4   B4NBA1   B4K5Q3   A0A1Y1NEG1   A0A3B0JTC3   A0A1B0BBV7   A0A1A9ZTD1   A0A1A9YK30   A0A1A9UTM9   B4GEV8   Q296P4   B4LX93   A0A1S3DG52   A0A0M4EL12   B4K218   B4JT53   A0A2S2R2Q7   A0A182VQM6   A0A0L0CC67   A0A034VN03   A0A1I8M8S7   A0A1I8Q393   W8BCC5   A0A0A1X3L2   A0A0K8VJB4   A0A1A9WJI2   A0A0T6B1Y7   A0A1B0G6R9   A0A224XQL9   E0VPG7   A0A0P5QUF3   A0A0K2UQZ1   A0A1J1HNV8   A0A336K2Q1   T1JF58   A0A0P5TIC5   A0A2P6KR80   A0A0P5STH2   A0A0N7ZKT2   A0A0P5T7K9   A0A0N8ENA7   A0A0P5XZE2   A0A0P6F9I6   A0A0P6CXK2   A0A0P5E468   A0A0P5WAH1   A0A0P6AD06   A0A087SVA1   A0A182LUQ2   A0A147BL38   A0A0P6FT64  

Pubmed

26354079    22118469    26227816    25244985    24438588    17510324    + More
26823975    26483478    25474469    20920257    23761445    20966253    12364791    14747013    17210077    18362917    19820115    23537049    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24845553    29403074    18057021    28004739    15632085    26108605    25348373    25315136    24495485    25830018    20566863    29652888   

EMBL

ODYU01011039    SOQ56525.1    NWSH01001881    PCG69817.1    RSAL01000210    RVE44223.1    + More
KQ459995    KPJ18529.1    AGBW02014538    OWR41486.1    KQ459600    KPI94299.1    JTDY01000846    KOB75683.1    ATLV01012221    KE524773    KFB36222.1    GEBQ01020975    GEBQ01020005    JAT19002.1    JAT19972.1    GECU01014791    JAS92915.1    CH477406    EAT41577.1    GDHC01017547    GDHC01012975    JAQ01082.1    JAQ05654.1    JXUM01027108    KQ560779    KXJ80928.1    JXUM01121104    KQ566461    KXJ70117.1    DS231847    EDS36450.1    GECZ01009685    JAS60084.1    AXCN02000174    GBBI01002639    JAC16073.1    ADMH02001856    ETN60845.1    ACPB03007139    AAAB01008794    EAA03580.5    APCN01002159    DS497704    EFA12701.1    APGK01047273    KB741077    ENN74314.1    KB632432    ERL95549.1    CH902617    EDV43555.1    CH480815    EDW41983.1    CM000364    EDX12753.1    CM000160    EDW97386.1    GFXV01007714    MBW19519.1    CH954181    EDV49079.1    AE014297    AY058675    AAF55252.2    AAL13904.1    KK853575    KDR06592.1    GGMR01007725    MBY20344.1    PYGN01000517    PSN44985.1    ABLF02040508    CH964232    EDW81065.2    CH933806    EDW15115.1    KRG01387.1    GEZM01005488    JAV96139.1    OUUW01000008    SPP84283.1    JXJN01011707    CH479182    EDW34143.1    CM000070    EAL28413.2    CH940650    EDW66745.1    CP012526    ALC45890.1    CH918305    EDW04525.1    CH916373    EDV94943.1    GGMS01015073    MBY84276.1    JRES01000623    KNC29822.1    GAKP01015445    JAC43507.1    GAMC01019116    GAMC01019115    JAB87439.1    GBXI01009039    GBXI01003405    JAD05253.1    JAD10887.1    GDHF01013366    JAI38948.1    LJIG01016142    KRT81488.1    CCAG010013864    GFTR01005983    JAW10443.1    DS235366    EEB15273.1    GDIQ01112189    JAL39537.1    HACA01022795    CDW40156.1    CVRI01000006    CRK88158.1    UFQS01000054    UFQT01000054    SSW98681.1    SSX19067.1    JH432147    GDIP01127437    JAL76277.1    MWRG01006629    PRD28837.1    GDIP01135491    JAL68223.1    GDIP01235681    JAI87720.1    GDIP01134196    LRGB01002925    JAL69518.1    KZS05459.1    GDIQ01010012    JAN84725.1    GDIP01066301    JAM37414.1    GDIQ01052664    JAN42073.1    GDIQ01088483    JAN06254.1    GDIP01148391    JAJ75011.1    GDIP01090049    JAM13666.1    GDIP01030996    JAM72719.1    KK112126    KFM56790.1    AXCM01007265    GEGO01003904    JAR91500.1    GDIQ01054504    JAN40233.1   

Proteomes

UP000218220    UP000283053    UP000053240    UP000007151    UP000053268    UP000037510    + More
UP000076408    UP000030765    UP000075881    UP000008820    UP000069940    UP000249989    UP000002320    UP000069272    UP000075886    UP000000673    UP000075882    UP000075880    UP000015103    UP000075902    UP000075903    UP000076407    UP000007062    UP000075840    UP000075885    UP000007266    UP000075884    UP000075900    UP000019118    UP000030742    UP000192221    UP000007801    UP000001292    UP000000304    UP000002282    UP000008711    UP000000803    UP000027135    UP000245037    UP000007819    UP000079169    UP000007798    UP000009192    UP000268350    UP000092460    UP000092445    UP000092443    UP000078200    UP000008744    UP000001819    UP000008792    UP000092553    UP000001070    UP000075920    UP000037069    UP000095301    UP000095300    UP000091820    UP000092444    UP000009046    UP000183832    UP000076858    UP000054359    UP000075883   

PRIDE

Q9VF10   

Pfam

PF13516   LRR_6        + More
PF00646   F-box
PF00560   LRR_1
PF12937   F-box-like
PF16275   SF1-HH
PF00013   KH_1

Interpro

IPR001611   Leu-rich_rpt        + More
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR032675   LRR_dom_sf       
IPR036047   F-box-like_dom_sf       
IPR001810   F-box_dom       
IPR004088   KH_dom_type_1       
IPR032570   SF1-HH       
IPR004087   KH_dom       
IPR036612   KH_dom_type_1_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF81383   SSF81383        + More
SSF54791   SSF54791       
SSF57756   SSF57756       

Gene 3D

3.80.10.10     3.30.1370.10    

ProteinModelPortal

A0A2H1WTX9   A0A2A4JCI9   A0A3S2L2K0   A0A194RM70   A0A212EJ22   A0A194PNI3   + More
A0A0L7LJH0   A0A182YS30   A0A084VE28   A0A1B6L5J8   A0A182K6J4   A0A1B6J157   Q174S4   A0A146LBE7   A0A182H6H3   A0A182H9L4   B0W6A3   A0A1B6GCC1   A0A182FSG1   A0A1S4FEL5   A0A182QLY2   A0A023F4W8   W5JD73   A0A182LCQ7   A0A182IVD7   T1HE01   A0A182TZ93   A0A182VP95   A0A182X1Y2   Q7QKJ7   A0A182HJE9   A0A182P5S2   D7EJI1   A0A182N553   A0A182RHX3   N6T2F3   U4UN84   A0A1W4VW27   B3M394   B4HLG3   B4QXS9   B4PRI6   A0A2H8U022   B3P3X3   Q9VF10   A0A067QT01   A0A2S2NT69   A0A2P8YL58   X1WJE5   A0A1S3DGC4   B4NBA1   B4K5Q3   A0A1Y1NEG1   A0A3B0JTC3   A0A1B0BBV7   A0A1A9ZTD1   A0A1A9YK30   A0A1A9UTM9   B4GEV8   Q296P4   B4LX93   A0A1S3DG52   A0A0M4EL12   B4K218   B4JT53   A0A2S2R2Q7   A0A182VQM6   A0A0L0CC67   A0A034VN03   A0A1I8M8S7   A0A1I8Q393   W8BCC5   A0A0A1X3L2   A0A0K8VJB4   A0A1A9WJI2   A0A0T6B1Y7   A0A1B0G6R9   A0A224XQL9   E0VPG7   A0A0P5QUF3   A0A0K2UQZ1   A0A1J1HNV8   A0A336K2Q1   T1JF58   A0A0P5TIC5   A0A2P6KR80   A0A0P5STH2   A0A0N7ZKT2   A0A0P5T7K9   A0A0N8ENA7   A0A0P5XZE2   A0A0P6F9I6   A0A0P6CXK2   A0A0P5E468   A0A0P5WAH1   A0A0P6AD06   A0A087SVA1   A0A182LUQ2   A0A147BL38   A0A0P6FT64  

PDB

3OGM     E-value=1.32014e-08,     Score=140

KEGG

101739661    K10273 F-box and leucine-rich repeat protein 7 | (RefSeq) F-box/LRR-repeat protein 7

GO

GO:0019005   GO:0006511   GO:0031146   GO:0016567   GO:0045571   GO:0032880   GO:0005911   GO:0035332   GO:0045177   GO:0044257   GO:0007449   GO:0045926   GO:0000398   GO:0045131   GO:0008270   GO:0005515   GO:0004190   GO:0006508   GO:0003676   GO:0005524   GO:0006468   GO:0006032   GO:0016021   GO:0004672   GO:0048384  

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00476999999999999

Exp number, first 60 AAs:

0.00105

Total prob of N-in:

0.02283

outside

1  -  261

 

 

Pi

269.761508

Theta

174.926802

Tajima's D

2.08912

CLR

0.03887

CSRT

0.892855357232138

Interpretation

Uncertain