Silkworm Genome Informatics Database

Gene

KWMTBOMO04046

Pre Gene Modal

BGIBMGA010101

Annotation

PREDICTED:_uncharacterized_protein_LOC106134460_[Amyelois_transitella]

Location

Bomo_Chr7(-):9657112-9665120 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.268

CDS

ATGAAATATTTCATTGTCATTTTCTGTCTCGTCTCTTTGGTTTGTTCAAAGAGCTTTGGCCATCACCCCGCTACTTATGGAGATCGCCGCTGTGTCAACATGTGGGATGAGGGCTGTATCAATGGACAGCTTCCAGGATCGGGTTGGGATGACTATTATTTGAATGGTAACTTTAATCCCGGCAAGCGGTGCCTTAATATGTGGGATGACGGCTGTGCCAATGGACAACTACCCGGAGCAGGCAACGATGACTATTACCTCGGCGGTGGATTCAATCCAGGCAAGCGTTGTGTCAACATGTGGGACGAAGGCTGCATCAATGATCAAATCAATGGAGCCGGTAACGATGACTATTATTTGAACAACGGCTTCAATCCAGGCAAACGTTCCGTGATTGAATTGTTCAAGAAACTGCATAAAACGAAACCTAAATTGTAA

Protein

MKYFIVIFCLVSLVCSKSFGHHPATYGDRRCVNMWDEGCINGQLPGSGWDDYYLNGNFNPGKRCLNMWDDGCANGQLPGAGNDDYYLGGGFNPGKRCVNMWDEGCINDQINGAGNDDYYLNNGFNPGKRSVIELFKKLHKTKPKL

Uniprot

A0A2A4K142 A0A2H1X1R4 A0A2W1BQX3 A0A1E1WSV0 A0A212FCZ0 V5GNJ5 + More
A0A067R2M0 A0A2J7QFB2 M7SSK7 A0A355DZH4

Pubmed

28756777 22118469 24845553 23723393 30148503

EMBL

NWSH01000282 PCG77779.1 ODYU01012744 SOQ59207.1 KZ149930 PZC77428.1 + More
GDQN01000949 JAT90105.1 AGBW02009118 OWR51611.1 GALX01002767 JAB65699.1 KK852747 KDR17268.1 NEVH01015299 PNF27277.1 KB706482 EMR67227.1 DNYI01000060 HBL15871.1

Proteomes

UP000218220 UP000007151 UP000027135 UP000235965 UP000012174

Pfam

PF00400 WD40 + More
PF08937 DUF1863

Interpro

IPR015032   MTH538_TIR-like_domain        + More
IPR035897   Toll_tir_struct_dom_sf
IPR020472   G-protein_beta_WD-40_rep
IPR036322   WD40_repeat_dom_sf
IPR019775   WD40_repeat_CS
IPR000157   TIR_dom
IPR015943   WD40/YVTN_repeat-like_dom_sf
IPR001680   WD40_repeat
IPR017986   WD40_repeat_dom

SUPFAM

SSF52200 SSF52200 + More
SSF50978 SSF50978

Gene 3D

2.130.10.10 3.40.50.10140

ProteinModelPortal

A0A2A4K142 A0A2H1X1R4 A0A2W1BQX3 A0A1E1WSV0 A0A212FCZ0 V5GNJ5 + More
A0A067R2M0 A0A2J7QFB2 M7SSK7 A0A355DZH4

KEGG

101739144 no KO assigned | (RefSeq) uncharacterized LOC101739144

GO

GO:0016021 GO:0007165

SignalP

Position: 1 - 20, Likelihood: 0.999542

Length:

145

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.71745

Exp number, first 60 AAs:

1.71745

Total prob of N-in:

0.10008

outside

1 - 145

Pi

284.101282

Theta

156.334635

Tajima's D

1.934706

CLR

0.218963

CSRT

0.872606369681516

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics