SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO04045
Pre Gene Modal
BGIBMGA010284
Annotation
PREDICTED:_uncharacterized_protein_LOC106134463_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.745
 

Sequence

CDS
ATGGGTAGTGATTTGCATGGCGATAAACAGGACAAATTAGTGAAGTTGCAAGCACGGAAGAAGGAACTAGAGCAGATGCTTGCTGCCAAAAATGAGGAATTGTATAAATTATGTGTTCAGGAAGTTCAGTTGACTGGGATTATGCCTCCGGAAGCACCGTTGAGCCCCGAAGTACCTCAGCGAGAGAGACTCGGCAGCATGAAAAGCGTCGACCGTTCTACAGACGGCAATGATGTACACGACGGGTCTGATAACTCCTCAAGACGTATGAGACTTACTTCTGCGGAGCGATTCCAAGATGTTGACCGTAAAAATTATGCTCACAGACTCTCTACACCTTCTATATCTGGTATGTCGACCAAAAGTCACCCTAGACACATTAGACGTCCGGAGACAAGTTGTTCTAACTTCTTTCCCTCTCCACCCCAAGAACGAACCACGGATACATTCTCGATGCATCCTTCTCATACGTATCCTTCTTTATCCAACCGACAGGAACCAATCAATGAGAATGTTCACAATGACGGCGCTTTCTATCGCCATCACACACTGACAACAGAATACATGAATAAAATTTATTATAACGGTGCTCCTGAAGCTCATAATGTGTCAAGGTTGCGGGAAACACATTTTAGTTCAAGTCATCCTGACATAACAACTCATTATACTCATGGAAATGTTATACCTCACCAGGTTCAAAATGGCTCCAAAAACACACCGTTATTATATCAGTATGCTTCTCAGTTAAAGGCTCAAAGCCAACACTTGGGAGGTGTGCACCACCACCAAATGCAGGGACAGTCTAAAAGGCGTCCAGAAACAGTGAGACGCAACACTTTACAGAGAACCCAAACTTATCATCTTACATCACATAGTGACTACAACCAACATTTAGAAAACATGGGAGATAATTACAGACCCCCGCTTCCTATATACCAACATCGTTCACAACCTGATATACAAGAAACTCATGTGCCAATTGGAAGAGTAGTTCCTGTACCCAACACATTACCATTAAGAGAACATAATGCCATTAGAAATCCTTTACATCTCCAGTTACAAGTGTCTACAGATGATTATGGTAGAGATAATAGAAGGATATACCCAGATGCCATGAGTCCTGTTAGCATAAAATCAGGCTACTCAAACTTTGATTCGGTGAGCATGAATAAGTTTTCTCCACTTTCGCAGTCTGATTTAAAAGTGAAAGAAAAACAGTGGTACGAAACATCATTAGATTCCCCCACAAAGCCTGAAGCGCCTTTACTTAAAAAGAGTTCTAGTTTGAAGAGAACATCCAGTATTGGGAATTCTCAAGCATATGAAGTTATGATTTCGACTGGTCGTCATTCAGCAATGCAAAGTCCTAATCATGTGTCTCAAAGTCCTCCAGTTTTATCTCCAAGTGGGATATCCTTGGAATCACCGAAAAATTTGACTATAATCGAACAGGGAAAAGTCATACCGTACAGAGAAGAAACTAAGCCGTTTGAAATGTCAGATTTTTATAAGTATTCGACTAAGTTTAGACAAGGGAATACACAGAAGACAGTGACCCAAAGTGCTAGTGTAAATTTGACTAATAAACCAGTTCAATATGTACCTGAACATTGGCATGGACAAATGAACTGA
Protein
MGSDLHGDKQDKLVKLQARKKELEQMLAAKNEELYKLCVQEVQLTGIMPPEAPLSPEVPQRERLGSMKSVDRSTDGNDVHDGSDNSSRRMRLTSAERFQDVDRKNYAHRLSTPSISGMSTKSHPRHIRRPETSCSNFFPSPPQERTTDTFSMHPSHTYPSLSNRQEPINENVHNDGAFYRHHTLTTEYMNKIYYNGAPEAHNVSRLRETHFSSSHPDITTHYTHGNVIPHQVQNGSKNTPLLYQYASQLKAQSQHLGGVHHHQMQGQSKRRPETVRRNTLQRTQTYHLTSHSDYNQHLENMGDNYRPPLPIYQHRSQPDIQETHVPIGRVVPVPNTLPLREHNAIRNPLHLQLQVSTDDYGRDNRRIYPDAMSPVSIKSGYSNFDSVSMNKFSPLSQSDLKVKEKQWYETSLDSPTKPEAPLLKKSSSLKRTSSIGNSQAYEVMISTGRHSAMQSPNHVSQSPPVLSPSGISLESPKNLTIIEQGKVIPYREETKPFEMSDFYKYSTKFRQGNTQKTVTQSASVNLTNKPVQYVPEHWHGQMN

Summary

Pfam
PF11819   DUF3338
Interpro
IPR021774   DUF3338       

Ontologies

GO

Topology

Length:
543
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00109
outside
1  -  543
 
 

Population Genetic Test Statistics

Pi
264.919974
Theta
192.939705
Tajima's D
1.165087
CLR
38.358458
CSRT
0.703064846757662
Interpretation
Uncertain
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