Gene

KWMTBOMO04040

Pre Gene Modal

BGIBMGA012704

Annotation

PREDICTED:_UPF0518_protein_GJ17503_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr7(+):9591011-9626625      View in EpiBrowser

Full name

UPF0518 protein GF15501       + More
UPF0518 protein CG3558      
UPF0518 protein GK23746      
UPF0518 protein GE18198      
UPF0518 protein GG24907      
UPF0518 protein AGAP011705      
UPF0518 protein GI14169      
UPF0518 protein GH13096      
UPF0518 protein AAEL005291      

Location in the cell

Nuclear   Reliability : 1.225 PlasmaMembrane   Reliability : 1.231

CDS

ATGAGTTGGCTATTAAGCTCATTGTCGTTGGGGAACAGGCTATCCAAGGATCTTGATCCTCGGATTGACTATGAACCCCATGCTTGCTTCAAATCTTTCTGGAAGCATTGGCAGCAAGCTTACGGCATTATCGTAAAGTCACAGCCCCAACACCTCCACGACGATGTCCTCGGCGTTGTGAACCACTTGGAGCAGATGACGACGCTTTTGGAACTAGAGGCGAGAGCGCGGGAGATCAACGCTACAATGGCTGAAGTATCTTGCCTTGAGCATTTGCTGGGCGAGAACCTTCTCGATAAGCTCTACGAATGGGCCATTTGTACCGGAAAATACGAAAATGCACTACGTCTGGAGCAGCTCAAAATGTTCGGGAGTCTGGTCAGCTATTACAGCACGCAGGTAATCGGAGCCGAACCCTTTCTCAGGCCATTATTGAAACTGCTCAGTGGTTTTAGAAATGAATTGCCGCCTCCTAATTTAGAAAGTCAACTAGTGAAAGTGTTGAATCAGATCTGCGTCGCCTTAATGCAGAATATGAGGTTCATCGATCTCTTCTTCCTGACGACTCACACACACGAGCGTTCTCAATCTGAGTTTATATTAGTGCGTCTGCTGCTGTCCTCCGTCCACCGGGAGGGCAGGACGGGCTCGGCAGCGCGCGACGCGTTACTGCTCTGCGCGAAAATGTCGGCCCGGTGTGACCAGCTCGCGGACTACATGTTGGCTGGCAACACCTGCCCCGTCCTGGCCACCGGTCTGAGCGGGCTGTACTCGCTGCTGCCCCGGACTCTGGACGAGGGCGTCTACCGGCTGACTTCTGATGACGTCAACCACGTGCACAAACTGACGCTCTTCATCGACTCCCTCGAGTTCTGTAACGCTGTTGCACAGGTAGCCCACGCATCGATAAAGAAGCATCTTCTGGACTTGCTGTACCAAGGATTCCTGGTGCCAGTACTGGGTCCGGCTCTACTGCAGAGTGGCGCCAACGAGCAAGTGACTGCCATGGTCTACCTGGAGCTCATACTGCGGTGCGTCACCGAAGACGGTCTGCTGAGGGCGGTGCTGCATTTCCTCTTCATGTACGAATATGATGAGGTCAAGATCGTTGATGTTCTCCTGAGACGACTGGAGGGGACCTCTCAGTTGTCGCTTCTCTCGCTCGCTCTTATGGAAACCCTAATCGATTTGAACTCTGAGGACGTGGCTATAGAACTCATCTTCAAGCATCTCCTCACCGGGAGCCACCTGTCACCGCCGCACCGTCACAATATAGCCGACCCGGAGTTATACAGAGAGGCCGCGGTGGCTTTCTTAGATCTGTCGCCGAAATGCTGTTCGAGACCCGTAGAGAAGACGAGACAGTGGGTGAGGGAGCTCGACATGAGCGGAAGGAGAGTGTTAGACTTCAGAAGAGAAGAGGAAAGGCCAGTGAACGGGGTTCACGATGAGATAGTCATGAAGAATCTAGTCAACGAGAATCCCAACGAGACCCTATACGGTAACTTCCACGCGTACTTATGTCATGCGCGATTCACGATCATATCGCGGGTGATCGCGTGCAGCAACTGGAGCTCGCGATACGAGGCCGTGACGTCACCGAAACGAGAAACGAACAACAACAAAGAAACAAGAGAGACAGACGCACAGGCCAACGCGAAAGAGCAGGACAGCCTTATTTCCATCTGCACCAGCGATTACGATACGTTGAAGACCAGCGAAACGTCTGAAAAGGAACAACACAGTCTGACCTCTCTGACGGCGTGTCTCTCAACTCTGAACGGCGACGAAACAAAACATATCGACAGCAGTGACGTGAAAGATCGAGATGATTTATCGATGAACCAAGCTAGTGACGTGAAAGACGCCGACAACGTATCGATAGGTGAAAGCAGTGACTACGAAAGCTTTAAATATAAAAGCGAGGAAGACGGTGATAATTTCGCTGAAGATTTGTTCAGGAAGAGTTTTCAGAAAGTACAAAATAATAGATTGTATGAAGTGCCTTTAGTTAGGAATTGGAGGGCAAGTGTCGAGTCGATTATAGGACCGCTCCTAAGCAGCTTATTAAAGAAGTCAGCAACTTTACTCGAATCCGACCTGACGGCGAACTGTCTCGTAACAGGAGTTATATCGAAGTTAGCCTCGTTTCCAACTCCACTACTGACGGCGCTGCTGCTCTGTCCTGCCTTCGTTCTACCACCCAATGTGCCCTCGTTGTTTCAAATACTGCACACCCTCAAAGAGGAGATAGACGAGCTGACAGACGGCATCGAGAACACGGGCGAGCTTATAGATAAAGCCCGAGTCTTCCTCATACAGAGAGAGTTGGCGCTGATGAAAACGCGGGGGCCGACAGCCGATGATAGTCAGGCACATCTACAAGACACGTCAGCGCACAAACAAGAAGATTCACCGTTCCGCCGCGTCGAGTCGAAAAGGCGTAGCATATCTAACAGCATCTACACGATGTTCGGAAGAAGATTATCATGTAAGTAG

Protein

MSWLLSSLSLGNRLSKDLDPRIDYEPHACFKSFWKHWQQAYGIIVKSQPQHLHDDVLGVVNHLEQMTTLLELEARAREINATMAEVSCLEHLLGENLLDKLYEWAICTGKYENALRLEQLKMFGSLVSYYSTQVIGAEPFLRPLLKLLSGFRNELPPPNLESQLVKVLNQICVALMQNMRFIDLFFLTTHTHERSQSEFILVRLLLSSVHREGRTGSAARDALLLCAKMSARCDQLADYMLAGNTCPVLATGLSGLYSLLPRTLDEGVYRLTSDDVNHVHKLTLFIDSLEFCNAVAQVAHASIKKHLLDLLYQGFLVPVLGPALLQSGANEQVTAMVYLELILRCVTEDGLLRAVLHFLFMYEYDEVKIVDVLLRRLEGTSQLSLLSLALMETLIDLNSEDVAIELIFKHLLTGSHLSPPHRHNIADPELYREAAVAFLDLSPKCCSRPVEKTRQWVRELDMSGRRVLDFRREEERPVNGVHDEIVMKNLVNENPNETLYGNFHAYLCHARFTIISRVIACSNWSSRYEAVTSPKRETNNNKETRETDAQANAKEQDSLISICTSDYDTLKTSETSEKEQHSLTSLTACLSTLNGDETKHIDSSDVKDRDDLSMNQASDVKDADNVSIGESSDYESFKYKSEEDGDNFAEDLFRKSFQKVQNNRLYEVPLVRNWRASVESIIGPLLSSLLKKSATLLESDLTANCLVTGVISKLASFPTPLLTALLLCPAFVLPPNVPSLFQILHTLKEEIDELTDGIENTGELIDKARVFLIQRELALMKTRGPTADDSQAHLQDTSAHKQEDSPFRRVESKRRSISNSIYTMFGRRLSCK

Similarity

Belongs to the UPF0518 family.

Keywords

Complete proteome   Phosphoprotein   Reference proteome   Alternative splicing  

Feature

chain  UPF0518 protein GF15501
splice variant  In isoform C.

Uniprot

A0A2A4K0J7   A0A3S2LLJ1   A0A1E1W4L8   A0A194PT30   A0A2H1WJC1   A0A194RLW4   + More
A0A212FDN2   A0A195B8I5   A0A195FXC8   W8AWV8   W8B7S7   E2B267   A0A348G6D8   A0A0C9RCL9   A0A158NVW4   F4WNR7   W8B7T6   T1PL10   T1PL41   A0A1I8M832   A0A0P8XW34   A0A0N8NZ80   A0A1I8PSL9   A0A1A9WAR8   T1PKN1   T1PKS2   A0A0A1XQU3   A0A1I8M833   A0A1I8M829   A0A0P8ZFN3   A0A1I8PSJ3   A0A026WDL8   B3MLI0   A0A1I8PSN1   A0A0R1DNE7   A0A0R1DRI3   A0A0L7R2G9   A0A0Q5WL58   A0A0Q5WI51   A0A195ED74   Q9VQK0-2   A0A3L8E3I4   A0A1Q3FDV2   Q9VQK0   A0A1J1IFY2   A0A0K8UN80   A0A1J1IE02   A0A0J9QUU4   A0A0J9QUP5   A0A1W4UUE4   A0A1W4UU06   A0A1Q3FD38   A0A0K8W777   A0A0K8U7C5   B4MTY2   A0A1Q3FB74   A0A1Q3FD06   A0A1Q3FCY0   A0A0R1DQG3   A0A1Q3FCY3   A0A1Q3FCH4   A0A0R1DIU7   B4NXB9   A0A0Q5WM62   B3NAN9   E2BRH1   M9PB19   Q9VQK0-3   A0A0J9QUP4   A0A0M3QU78   A0A0J9QVH5   A0A0K8VTJ8   A0A1W4V7Q4   A0A0K8WJG6   A0A0Q9WPZ2   A0A0Q9WPX5   A0A1W4V6S4   A0A1Q3FE84   A0A1A9ZP54   A0A1B0GAN9   A0A310SFG0   A0A1Q3FEG1   A0A1S4H8F1   A0A1Q3FDK7   A0A3B0K9E3   Q7PZ36   A0A336LVH9   A0A0C9RG73   A0A084W8G9   A0A1A9VD89   B4KJS5   A0A336MIX8   B4JQY3   A0A0Q9XE69   Q17AI4   A0A3B0JJ39   A0A3B0KB22  

Pubmed

26354079    22118469    24495485    20798317    21347285    21719571    + More
25315136    17994087    25830018    24508170    17550304    10731132    12537572    12537569    18327897    30249741    22936249    12537568    12537573    12537574    16110336    17569856    17569867    12364791    24438588    17510324   

EMBL

NWSH01000282    PCG77791.1    RSAL01000067    RVE49313.1    GDQN01009152    JAT81902.1    + More
KQ459600    KPI94290.1    ODYU01009050    SOQ53175.1    KQ459995    KPJ18537.1    AGBW02009024    OWR51842.1    KQ976565    KYM80552.1    KQ981215    KYN44499.1    GAMC01017272    JAB89283.1    GAMC01017274    JAB89281.1    GL445059    EFN60242.1    FX986054    BBF98011.1    GBYB01006050    JAG75817.1    ADTU01002902    ADTU01002903    ADTU01002904    GL888237    EGI64260.1    GAMC01017264    JAB89291.1    KA649452    AFP64081.1    KA649451    AFP64080.1    CH902620    KPU73582.1    KPU73580.1    KA649337    AFP63966.1    KA649336    AFP63965.1    GBXI01000906    JAD13386.1    KPU73581.1    KK107260    EZA54058.1    CM000157    KRJ97170.1    KRJ97174.1    KQ414666    KOC65034.1    CH954177    KQS70026.1    KQS70025.1    KQ979074    KYN22799.1    AE014134    BT021330    AY060685    QOIP01000001    RLU27102.1    GFDL01009312    JAV25733.1    CVRI01000047    CRK98436.1    GDHF01024172    JAI28142.1    CRK98435.1    CM002910    KMY87796.1    KMY87792.1    GFDL01009595    JAV25450.1    GDHF01005415    JAI46899.1    GDHF01029826    GDHF01018784    JAI22488.1    JAI33530.1    CH963852    GFDL01010210    JAV24835.1    GFDL01009677    JAV25368.1    GFDL01009609    JAV25436.1    KRJ97171.1    GFDL01009683    JAV25362.1    GFDL01009769    JAV25276.1    KRJ97172.1    KRJ97173.1    KQS70024.1    GL449965    EFN81663.1    AGB92513.1    KMY87793.1    CP012523    ALC40159.1    KMY87794.1    KMY87795.1    GDHF01010131    JAI42183.1    GDHF01001023    JAI51291.1    KRF98276.1    KRF98275.1    GFDL01009175    JAV25870.1    CCAG010022197    KQ765071    OAD54158.1    GFDL01009102    JAV25943.1    AAAB01008986    GFDL01009394    JAV25651.1    OUUW01000006    SPP82256.1    UFQS01000226    UFQT01000226    SSX01672.1    SSX22052.1    GBYB01006051    JAG75818.1    ATLV01021431    ATLV01021432    ATLV01021433    KE525318    KFB46513.1    CH933807    UFQS01001192    UFQT01001192    SSX09615.1    SSX29411.1    CH916372    KRG02734.1    CH477335    SPP82255.1    SPP82251.1   

Proteomes

UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    UP000078540    + More
UP000078541    UP000000311    UP000005205    UP000007755    UP000095301    UP000007801    UP000095300    UP000091820    UP000053097    UP000002282    UP000053825    UP000008711    UP000078492    UP000000803    UP000279307    UP000183832    UP000192221    UP000007798    UP000008237    UP000092553    UP000092445    UP000092444    UP000268350    UP000007062    UP000030765    UP000078200    UP000009192    UP000001070    UP000008820   

PRIDE

B3MLI0    Q9VQK0    B4MTY2    B4NXB9    B3NAN9    M9PB19    + More
Q7PZ36    B4JQY3   

Pfam

PF10257   RAI16-like

Interpro

IPR019384   RetinoicA-induced_16-like        + More
IPR016024   ARM-type_fold       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

A0A2A4K0J7   A0A3S2LLJ1   A0A1E1W4L8   A0A194PT30   A0A2H1WJC1   A0A194RLW4   + More
A0A212FDN2   A0A195B8I5   A0A195FXC8   W8AWV8   W8B7S7   E2B267   A0A348G6D8   A0A0C9RCL9   A0A158NVW4   F4WNR7   W8B7T6   T1PL10   T1PL41   A0A1I8M832   A0A0P8XW34   A0A0N8NZ80   A0A1I8PSL9   A0A1A9WAR8   T1PKN1   T1PKS2   A0A0A1XQU3   A0A1I8M833   A0A1I8M829   A0A0P8ZFN3   A0A1I8PSJ3   A0A026WDL8   B3MLI0   A0A1I8PSN1   A0A0R1DNE7   A0A0R1DRI3   A0A0L7R2G9   A0A0Q5WL58   A0A0Q5WI51   A0A195ED74   Q9VQK0-2   A0A3L8E3I4   A0A1Q3FDV2   Q9VQK0   A0A1J1IFY2   A0A0K8UN80   A0A1J1IE02   A0A0J9QUU4   A0A0J9QUP5   A0A1W4UUE4   A0A1W4UU06   A0A1Q3FD38   A0A0K8W777   A0A0K8U7C5   B4MTY2   A0A1Q3FB74   A0A1Q3FD06   A0A1Q3FCY0   A0A0R1DQG3   A0A1Q3FCY3   A0A1Q3FCH4   A0A0R1DIU7   B4NXB9   A0A0Q5WM62   B3NAN9   E2BRH1   M9PB19   Q9VQK0-3   A0A0J9QUP4   A0A0M3QU78   A0A0J9QVH5   A0A0K8VTJ8   A0A1W4V7Q4   A0A0K8WJG6   A0A0Q9WPZ2   A0A0Q9WPX5   A0A1W4V6S4   A0A1Q3FE84   A0A1A9ZP54   A0A1B0GAN9   A0A310SFG0   A0A1Q3FEG1   A0A1S4H8F1   A0A1Q3FDK7   A0A3B0K9E3   Q7PZ36   A0A336LVH9   A0A0C9RG73   A0A084W8G9   A0A1A9VD89   B4KJS5   A0A336MIX8   B4JQY3   A0A0Q9XE69   Q17AI4   A0A3B0JJ39   A0A3B0KB22  

KEGG

101746784    no KO assigned | (RefSeq) UPF0518 protein AAEL005291-like

GO

Length:

832

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.31778

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00073

outside

1  -  832

 

 

Pi

264.944302

Theta

171.343134

Tajima's D

2.511278

CLR

0.419693

CSRT

0.945252737363132

Interpretation

Uncertain