Silkworm Genome Informatics Database

Gene

KWMTBOMO04038

Pre Gene Modal

BGIBMGA010281

Annotation

PREDICTED:_calcium-binding_protein_P?_partial_[Bombyx_mori]

Location

Bomo_Chr7(+):9584831-9586624 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.706 Nuclear Reliability : 2.071

CDS

ATGACTGATGGCTACTCCAGCTCTACGCCCGGATATCAAACTGGAACTTCGGGCTACCCATCAAGCCCGGGATACTCAGGGACTAGTCAACGACCACAAACCGGATACCCTGGACAAGGAACATCGTATCCTAATTTAGGAGAACCGGGGAGTCAAGGGTTAAATGACCCTAGTAGATACCCTGGACAAGATACATCGTATCCAAGTATTCCTGCATACCCAGGCCCGCCAGGATCATCTTACCCAGGACAATCCGGAATCTATCCTGGTCAAGAATCATCTGGAAATTATCCCGGTCAGGATACCAGAGGGCCATCAAGTTCATTCCCTGGGTCTAGATTCCCCGGTCGACCCGGTTCTCCTAGCTTCAATCCCGGTTCTTTTTCACCAGCATTCGGTACAGACGGCACTGGTGCCTACGAAGGTGGGGACTACTCTGCTATACCCGGTCAACCCGATATAGATTATCCTATATTGTCCGACATTCCGCAAACCTCATTTAGCTGTAACTCCCAACAATACCCTGGTTATTACGCTGATGTTGAGACCCGTTGTCAAGTGTTCCACGTCTGCGCGAACAACAAGACTTATGACTTTCTTTGTCCTAACGGAACTGTCTTCTCGCAAGAAGTTTTTGTTTGCGTCTGGTGGAACCAATTTGATTGTAGCTCAGCTCCCAGCCTCTTCAGCCTAAATGCAAATCTTTACGACTACTCTATAACTGGTTCTCAGGGTGGATTCCCAAGTTCAGGACTCAATAATTATCCCGGAGGACAGCGTGGACAGACATTTCCAGGACGTGGACCATTAAGACCTTCGGGTAATTACCCTGGACAATCAGGAGCTCAAGGACCATCTGGTTTCCCAAGTAGTTTGGGACCGCAAGGGCCTCAAGCTAATTTCCCCGGTAGTTCTGGATTCTCTGGGAGCGGACGTCCTCAGAGTCCAGTAAGATATCCTGGTAGCTCAGGAACACAAGGTACCACGAGCAACTACCCCGGTACTTCTCAAAGCTACCCTAATGGTTTTGGGTCTCAGAATCCTTCTACTGGTTATCCTGGTACAAACGGCGCTCAGGGACCTTCATCGACTTACCCATTCACTTCAAATTCTAGACCATCTACTGCCTATCCAGGCAGTGGATCTACTGGAGGATACCCAAACTCAGGTTCTTACTCAGGCAATTCCGGGCCTCAAGGTCCCACAACAGTATACCCTGCTACATCAGGCACTCGGGGACCGTCTTCAACATACCCAGATACATCAGGACAGCGCTACCCGGGATCAGGGCCAGGAGGGTCGTCTTCTGGACCAGGATCTAATAACTATGATGGAAACCAAGGATACCCCTCAGACAAACCAACCGGCTCATTTTTCCCAACCGGAAACGGAGGTAGACCACAACAACCGAACCGACAATATCTTCCACCTAGAAACTAG

Protein

MTDGYSSSTPGYQTGTSGYPSSPGYSGTSQRPQTGYPGQGTSYPNLGEPGSQGLNDPSRYPGQDTSYPSIPAYPGPPGSSYPGQSGIYPGQESSGNYPGQDTRGPSSSFPGSRFPGRPGSPSFNPGSFSPAFGTDGTGAYEGGDYSAIPGQPDIDYPILSDIPQTSFSCNSQQYPGYYADVETRCQVFHVCANNKTYDFLCPNGTVFSQEVFVCVWWNQFDCSSAPSLFSLNANLYDYSITGSQGGFPSSGLNNYPGGQRGQTFPGRGPLRPSGNYPGQSGAQGPSGFPSSLGPQGPQANFPGSSGFSGSGRPQSPVRYPGSSGTQGTTSNYPGTSQSYPNGFGSQNPSTGYPGTNGAQGPSSTYPFTSNSRPSTAYPGSGSTGGYPNSGSYSGNSGPQGPTTVYPATSGTRGPSSTYPDTSGQRYPGSGPGGSSSGPGSNNYDGNQGYPSDKPTGSFFPTGNGGRPQQPNRQYLPPRN

Uniprot

H9JL80 A0A194RL27 A0A194PNH4 A0A2W1BQP3 A0A0L7LT25

Pubmed

19121390 26354079 28756777 26227816

EMBL

BABH01011770 BABH01011771 KQ459995 KPJ18538.1 KQ459600 KPI94289.1 + More
KZ149930 PZC77419.1 JTDY01000144 KOB78615.1

Proteomes

UP000005204 UP000053240 UP000053268 UP000037510

PRIDE

H9JL80

Pfam

PF01607 CBM_14

Interpro

IPR002557 Chitin-bd_dom + More
IPR036508 Chitin-bd_dom_sf

SUPFAM

SSF57625 SSF57625

ProteinModelPortal

H9JL80 A0A194RL27 A0A194PNH4 A0A2W1BQP3 A0A0L7LT25

KEGG

101746263 no KO assigned | (RefSeq) calcium-binding protein P

GO

GO:0006030 GO:0005576 GO:0008061 GO:0003899 GO:0005581 GO:0005524 GO:0007179 GO:0006811 GO:0006032 GO:0016021 GO:0004672 GO:0048384

Length:

479

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00064

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00282

outside

1 - 479

Pi

235.285878

Theta

186.689396

Tajima's D

0.920441

CLR

0

CSRT

0.63656817159142

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics